BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3836.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herb... 495 e-138 ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Ja... 362 4e-98 ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic bala... 357 2e-96 ref|YP_001100589.1| aerobic, anaerobic respiration, osmotic bala... 353 1e-95 ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Ox... 328 5e-88 >ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herbaspirillum seropedicae SmR1] gb|ADJ64679.1| Crp/Fnr family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 261/278 (93%), Positives = 265/278 (95%) Query: 1 MNQPCHSTSLAAANNAAAPLTQCSPLTAAREAAASSALRSCTACGMHQLCLPMGLDESDM 60 MNQ CHST + NAAAPLT CS LTAAREAAASSALRSCTACGMHQLCLPMGLDESDM Sbjct: 1 MNQSCHSTPITTPANAAAPLTHCSSLTAAREAAASSALRSCTACGMHQLCLPMGLDESDM 60 Query: 61 KRLDKIIGRRKVARDDFLYRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLG 120 KRLDKIIGRRKVARDDFLYRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLG Sbjct: 61 KRLDKIIGRRKVARDDFLYRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLG 120 Query: 121 MDAISTEQHQCDAVALQDSEVCEIPFARLEQLFGQIPHLLRHFHRMMSHEITSEQNVIML 180 MDAISTEQHQCDAVALQDSEVCEIPFARLEQLFGQIPHLLRHFHR+MSHEITSEQNVIML Sbjct: 121 MDAISTEQHQCDAVALQDSEVCEIPFARLEQLFGQIPHLLRHFHRIMSHEITSEQNVIML 180 Query: 181 LGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRK 240 LGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRK Sbjct: 181 LGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRK 240 Query: 241 QGLLAVEQRDVEVVDLAALKRLAAGVDACTPAPAAAAT 278 QGLLAVEQRDVEVVDLAALKRLAAGVDACT P + + Sbjct: 241 QGLLAVEQRDVEVVDLAALKRLAAGVDACTATPTRSTS 278 >ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR90137.1| transcriptional regulator, Crp/Fnr family [Janthinobacterium sp. Marseille] Length = 252 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 180/252 (71%), Positives = 213/252 (84%), Gaps = 1/252 (0%) Query: 20 LTQCSPLTAAREAAASSALRSCTACGMHQLCLPMGLDESDMKRLDKIIGRR-KVARDDFL 78 ++Q SP T + ++ SC+ C MHQLCLPMGL E+DM RLDKIIGRR KVARDD+L Sbjct: 1 MSQASPSTTDPALSVNALRASCSTCSMHQLCLPMGLGENDMDRLDKIIGRRRKVARDDYL 60 Query: 79 YRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLGMDAISTEQHQCDAVALQD 138 YR+GD FT LYAVRVGHFKT Q N G++QITGFQM GELLGMDAIST++H C+AVAL+D Sbjct: 61 YRMGDAFTNLYAVRVGHFKTCQINAGGEQQITGFQMTGELLGMDAISTDRHHCNAVALED 120 Query: 139 SEVCEIPFARLEQLFGQIPHLLRHFHRMMSHEITSEQNVIMLLGNMRAEQRFAAFLVNLS 198 SEVCEIPF RLE+LFG +P LLRHFHRMMS EIT EQ+V++LLGNMRAEQRFAAFLVNL+ Sbjct: 121 SEVCEIPFPRLEELFGTMPTLLRHFHRMMSQEITREQSVMLLLGNMRAEQRFAAFLVNLA 180 Query: 199 SRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRKQGLLAVEQRDVEVVDLAA 258 SRY ARGYSST FQLRM+R+D+GNYLGLTIESISRL+SKF+KQGLL V R++E++DL Sbjct: 181 SRYMARGYSSTSFQLRMSREDIGNYLGLTIESISRLLSKFKKQGLLKVNNREIELLDLTL 240 Query: 259 LKRLAAGVDACT 270 LK +AAG + C+ Sbjct: 241 LKAMAAGTETCS 252 >ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic balance transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61795.1| Transcriptional activator protein anr [Herminiimonas arsenicoxydans] Length = 251 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 173/237 (72%), Positives = 205/237 (86%), Gaps = 2/237 (0%) Query: 36 SALR-SCTACGMHQLCLPMGLDESDMKRLDKIIGRR-KVARDDFLYRIGDRFTALYAVRV 93 SA+R SC C MHQLCLPMGL E+D+ +LD+IIGRR KV RD +LYR+ D FT LYAVR+ Sbjct: 15 SAVRASCATCSMHQLCLPMGLGENDIDKLDQIIGRRRKVPRDGYLYRMDDPFTNLYAVRI 74 Query: 94 GHFKTYQENLDGDRQITGFQMPGELLGMDAISTEQHQCDAVALQDSEVCEIPFARLEQLF 153 GHFKTYQ N G++QITGFQM GELLGMDAIST++H CDA+AL+DSEVCEIPF RLE+LF Sbjct: 75 GHFKTYQVNAGGEQQITGFQMAGELLGMDAISTDRHHCDAIALEDSEVCEIPFPRLEELF 134 Query: 154 GQIPHLLRHFHRMMSHEITSEQNVIMLLGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQL 213 G +P LLRHFHRMMS EIT EQ+V++LLGNMRAEQRFAAFLVNL+SRY ARGYSST FQL Sbjct: 135 GSMPILLRHFHRMMSQEITREQSVMLLLGNMRAEQRFAAFLVNLASRYVARGYSSTSFQL 194 Query: 214 RMTRQDVGNYLGLTIESISRLISKFRKQGLLAVEQRDVEVVDLAALKRLAAGVDACT 270 RM+R+D+GNYLGLTIESISRL+SKF+KQGLL V R++E++DL LK +AAG + C+ Sbjct: 195 RMSREDIGNYLGLTIESISRLLSKFKKQGLLKVSNREIELLDLVTLKAMAAGTETCS 251 >ref|YP_001100589.1| aerobic, anaerobic respiration, osmotic balance transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL62467.1| Fumarate and nitrate reduction regulatory protein [Herminiimonas arsenicoxydans] Length = 282 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 167/249 (67%), Positives = 204/249 (81%) Query: 35 SSALRSCTACGMHQLCLPMGLDESDMKRLDKIIGRRKVARDDFLYRIGDRFTALYAVRVG 94 SSALR C+ C M Q+CLP GL++ DM+RLD+II R+K+A+D +LYRIGD+FTALYAVR+G Sbjct: 15 SSALRHCSGCSMRQICLPAGLNQHDMRRLDQIIVRKKIAKDSYLYRIGDKFTALYAVRIG 74 Query: 95 HFKTYQENLDGDRQITGFQMPGELLGMDAISTEQHQCDAVALQDSEVCEIPFARLEQLFG 154 HFKTYQEN G+RQI GFQM G+LLGMDAIS HQCDAVAL DSEVC IP++RLE LF Sbjct: 75 HFKTYQENFIGNRQINGFQMSGDLLGMDAISNLLHQCDAVALDDSEVCVIPYSRLEALFT 134 Query: 155 QIPHLLRHFHRMMSHEITSEQNVIMLLGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQLR 214 ++P L+RHFHR+MS EI EQN+IM+LGNM AEQRFAAFL+NLS RYA RGYS RFQLR Sbjct: 135 ELPILMRHFHRIMSQEIIGEQNMIMILGNMYAEQRFAAFLINLSRRYATRGYSPIRFQLR 194 Query: 215 MTRQDVGNYLGLTIESISRLISKFRKQGLLAVEQRDVEVVDLAALKRLAAGVDACTPAPA 274 MTR+D+GNYLGLT+ESISR+I+K RK L+ + QRDVE++DL AL +LAAG+D +P Sbjct: 195 MTREDIGNYLGLTMESISRMIAKLRKGRLIEIVQRDVEILDLTALNKLAAGIDIIETSPI 254 Query: 275 AAATARAAS 283 + AA+ Sbjct: 255 SICIKSAAT 263 >ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] gb|EGF32622.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 166/233 (71%), Positives = 196/233 (84%), Gaps = 1/233 (0%) Query: 40 SCTACGMHQLCLPMGLDESDMKRLDKIIGRRKVAR-DDFLYRIGDRFTALYAVRVGHFKT 98 SC +C +HQLCLPMGLDE D+ RLD+IIGRR+ + D+ LYR+ D F LYA+R GHFKT Sbjct: 21 SCASCSLHQLCLPMGLDEGDINRLDQIIGRRRRIQRDEALYRMEDPFRNLYAIRFGHFKT 80 Query: 99 YQENLDGDRQITGFQMPGELLGMDAISTEQHQCDAVALQDSEVCEIPFARLEQLFGQIPH 158 +Q N GD ITGFQM GELLGMDAISTE+H CDAVAL+DSEVCEIPFARLE+LFG+IP Sbjct: 81 FQINPGGDTHITGFQMAGELLGMDAISTERHHCDAVALEDSEVCEIPFARLEELFGEIPR 140 Query: 159 LLRHFHRMMSHEITSEQNVIMLLGNMRAEQRFAAFLVNLSSRYAARGYSSTRFQLRMTRQ 218 LL HFHR+MS EI EQNV++LLGNMRAEQRFAAFLVNLSSRYA RGYS+T FQLRM+R+ Sbjct: 141 LLHHFHRIMSQEIMREQNVMLLLGNMRAEQRFAAFLVNLSSRYATRGYSATSFQLRMSRE 200 Query: 219 DVGNYLGLTIESISRLISKFRKQGLLAVEQRDVEVVDLAALKRLAAGVDACTP 271 D+GNYLGLTIESISRL+S+F+KQG L V++R+V ++D L+ LAAG CTP Sbjct: 201 DIGNYLGLTIESISRLLSRFKKQGWLEVDKREVRLLDATMLRALAAGTTHCTP 253