BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3828.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776579.1| multidrug resistance transport transmembrane... 491 e-137 ref|ZP_08387537.1| hlyD secretion family protein [Sphingomonas s... 335 9e-90 emb|CBJ36896.1| putative multidrug resistance transport transmem... 324 1e-86 ref|YP_003559358.1| multidrug resistance efflux pump [Sphingobiu... 315 7e-84 ref|YP_004555076.1| secretion protein HlyD family protein [Sphin... 308 1e-81 >ref|YP_003776579.1| multidrug resistance transport transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64671.1| multidrug resistance transport transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 397 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 364/401 (90%), Positives = 381/401 (95%), Gaps = 4/401 (0%) Query: 1 MTDATPSNTPSNTEASSSRPDTSTNGSNKNNAPKKRMSPRARFILRALGLLVLVIVAAWV 60 MTDATP TP A + D + + +APKKRM+PRARFILRAL ++VLVIVAAWV Sbjct: 1 MTDATPHQTP----AEPDQADAPRSDDKQGSAPKKRMNPRARFILRALLVVVLVIVAAWV 56 Query: 61 LYYQFRGKYLESTNDAFVQADSVTVSSKVTGYVDQVLVADNQIVKAGQPLVRIDARDYSA 120 LYYQFRGKYLESTNDAFVQADSVTVSSKV+GYVDQVLVADNQIVKAGQPLVRIDARDYSA Sbjct: 57 LYYQFRGKYLESTNDAFVQADSVTVSSKVSGYVDQVLVADNQIVKAGQPLVRIDARDYSA 116 Query: 121 QAAQAKAQIDAASASEEAAHAQLAEQQAAIAQAKAQLASADEDARFATAEVERYTPLAAS 180 QAAQAKAQIDAA+ASEEAA+AQLAEQQAAIAQAKAQLA+ADEDARFATAEVERYTPLAAS Sbjct: 117 QAAQAKAQIDAAAASEEAANAQLAEQQAAIAQAKAQLAAADEDARFATAEVERYTPLAAS 176 Query: 181 GAETRERLTTLRNQQAQARSTVAARRAALDAAQLRVRSLQAQVRQAQAQGETAKAQYDAA 240 GAETRERLTTL NQQAQARSTVAARRAALDAAQLRVRSLQAQVRQAQAQGETAKAQYDAA Sbjct: 177 GAETRERLTTLHNQQAQARSTVAARRAALDAAQLRVRSLQAQVRQAQAQGETAKAQYDAA 236 Query: 241 SVNLGYTEIRAAVDGRIGDKQVRVGQFVSPGTRMMTVVPTRFYVSANFKETQIGIMRIGQ 300 SVNLGYTEIRA+VDGRIGDKQVRVGQFVSPGTRMMTVVPTRFYVSANFKETQIGIMRIGQ Sbjct: 237 SVNLGYTEIRASVDGRIGDKQVRVGQFVSPGTRMMTVVPTRFYVSANFKETQIGIMRIGQ 296 Query: 301 PAIIKVDALPGVEFHGHVESLSPGTGAQFSLLPPQNATGNFTKIVQRLPVRVAVDATPEE 360 PAIIKVDALPGVEFHGHVESLSPGTGAQFSLLPPQNATGNFTKIVQR+PVRVA+DATPEE Sbjct: 297 PAIIKVDALPGVEFHGHVESLSPGTGAQFSLLPPQNATGNFTKIVQRVPVRVAIDATPEE 356 Query: 361 TRAFVAGLSVTVEVNTIAAKDELRELRERNSESNATRKESQ 401 TRAFVAGLSVTVEVNTIAAKDELR+LRER+SE+NATRKE Q Sbjct: 357 TRAFVAGLSVTVEVNTIAAKDELRDLRERSSEANATRKEPQ 397 >ref|ZP_08387537.1| hlyD secretion family protein [Sphingomonas sp. S17] gb|EGI56206.1| hlyD secretion family protein [Sphingomonas sp. S17] Length = 398 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 216/363 (59%), Positives = 275/363 (75%), Gaps = 1/363 (0%) Query: 40 RARFILRALGLLVLVIVAAWVLYYQFRGKYLESTNDAFVQADSVTVSSKVTGYVDQVLVA 99 R R IL + + ++ W Y+ G+Y++STNDAF+QAD+VTV+ KV+GYVD+V V Sbjct: 34 RIRVILLVVAAIAIIGGVFWYARYKSVGQYMQSTNDAFIQADAVTVAPKVSGYVDKVFVG 93 Query: 100 DNQIVKAGQPLVRIDARDYSAQAAQAKAQIDAASASEEAAHAQLAEQQAAIAQAKAQLAS 159 +NQ VKAGQPL++ID RDYSAQ AQ +AQI A A+ E AQ+ EQQAAI +A+A+L + Sbjct: 94 ENQDVKAGQPLLQIDTRDYSAQTAQIQAQIGVARANAEGVQAQIREQQAAIDRARAELRA 153 Query: 160 ADEDARFATAEVERYTPLAASGAETRERLTTLRNQQAQARSTVAARRAALDAAQLRVRSL 219 A DA FA AEV RYTPLAASGAE+RERL+ L+NQ QA + VA+ AAL AAQ RV +L Sbjct: 154 AQSDAAFAQAEVTRYTPLAASGAESRERLSQLQNQARQANARVASASAALAAAQRRVGTL 213 Query: 220 QAQVRQAQAQGETAKAQYDAASVNLGYTEIRAAVDGRIGDKQVRVGQFVSPGTRMMTVVP 279 AQV+QA++QG+ AKAQ DAA VNLG T IRA++ GR+G+K VRVGQFV GTR M++VP Sbjct: 214 NAQVQQARSQGQAAKAQLDAAEVNLGSTLIRASIAGRVGNKTVRVGQFVQAGTRTMSIVP 273 Query: 280 -TRFYVSANFKETQIGIMRIGQPAIIKVDALPGVEFHGHVESLSPGTGAQFSLLPPQNAT 338 ++ Y+ ANFKETQ+G+MR GQP I+VDALP VE GHVES++PGTGAQFSLLPPQNAT Sbjct: 274 VSQLYIEANFKETQLGLMRPGQPVKIEVDALPDVEIKGHVESVAPGTGAQFSLLPPQNAT 333 Query: 339 GNFTKIVQRLPVRVAVDATPEETRAFVAGLSVTVEVNTIAAKDELRELRERNSESNATRK 398 GNFTKIVQR+PVR+AVDA P+ V G+SV V V+T +AK L+ + E+ + N R+ Sbjct: 334 GNFTKIVQRVPVRIAVDADPQTRSLLVPGMSVEVVVDTRSAKGALKRIAEQQDQHNEARE 393 Query: 399 ESQ 401 +Q Sbjct: 394 GAQ 396 >emb|CBJ36896.1| putative multidrug resistance transport transmembrane protein [Ralstonia solanacearum CMR15] Length = 390 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 210/346 (60%), Positives = 266/346 (76%) Query: 33 PKKRMSPRARFILRALGLLVLVIVAAWVLYYQFRGKYLESTNDAFVQADSVTVSSKVTGY 92 P KR+ R R ++ + L L+ A + +Y+ RGKY+E T+DA++QAD VTV+ KV+GY Sbjct: 29 PAKRLRGRPRRVVMGVAALALLGAAGGLAHYELRGKYVEDTDDAYIQADIVTVAPKVSGY 88 Query: 93 VDQVLVADNQIVKAGQPLVRIDARDYSAQAAQAKAQIDAASASEEAAHAQLAEQQAAIAQ 152 V+QV VA+NQ V+AGQ L+RID R+Y+AQ AQ AQ++AA+AS + A AQLA Q+AAIAQ Sbjct: 89 VEQVDVANNQAVRAGQRLLRIDPREYAAQLAQYLAQVEAANASADNARAQLATQKAAIAQ 148 Query: 153 AKAQLASADEDARFATAEVERYTPLAASGAETRERLTTLRNQQAQARSTVAARRAALDAA 212 A+AQL SA+ DA+F ++ +RY L ASGAETR+RL+TL+NQ AQAR+ A+RAAL A Sbjct: 149 ARAQLQSAEHDAQFTASQTQRYASLVASGAETRDRLSTLQNQAAQARANAQAQRAALTKA 208 Query: 213 QLRVRSLQAQVRQAQAQGETAKAQYDAASVNLGYTEIRAAVDGRIGDKQVRVGQFVSPGT 272 L + SLQAQ+RQA+AQ +TA+AQ A VNL TE+RA+ DGR+GD QVR GQFVS GT Sbjct: 209 TLEIASLQAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDSQVRAGQFVSAGT 268 Query: 273 RMMTVVPTRFYVSANFKETQIGIMRIGQPAIIKVDALPGVEFHGHVESLSPGTGAQFSLL 332 R+M+VVPT Y++ANFKETQ+G MRIGQP I VDA P GHVESLSPGTGAQFSLL Sbjct: 269 RLMSVVPTHLYITANFKETQLGRMRIGQPVHIHVDAFPDEAIEGHVESLSPGTGAQFSLL 328 Query: 333 PPQNATGNFTKIVQRLPVRVAVDATPEETRAFVAGLSVTVEVNTIA 378 PPQNATGNF KIVQR+PVR+A+D T AG+SVTV+V+T+A Sbjct: 329 PPQNATGNFIKIVQRVPVRIALDVTDRLKPLLAAGMSVTVDVDTLA 374 >ref|YP_003559358.1| multidrug resistance efflux pump [Sphingobium japonicum UT26S] dbj|BAI98626.1| multidrug resistance efflux pump [Sphingobium japonicum UT26S] Length = 383 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 221/381 (58%), Positives = 279/381 (73%), Gaps = 4/381 (1%) Query: 16 SSSRPDTSTNGSNKNNAPKKRMSPRARFILRALGLLVLVIVAAWVLYYQFRGKYLESTND 75 +SS P +G ++ +A K SPR R IL L ++ W + ++ GKY ESTND Sbjct: 2 ASSSPHGDDSGQSRPSALK---SPRTRLILLIAALALIGGGVLWFIRFETFGKYQESTND 58 Query: 76 AFVQADSVTVSSKVTGYVDQVLVADNQIVKAGQPLVRIDARDYSAQAAQAKAQIDAASAS 135 A++QADS+TV+ KV+GYVD+V V +NQ V+AGQPLV+ID RDY AQAAQ+ AQID A A+ Sbjct: 59 AYIQADSITVAPKVSGYVDRVFVEENQDVRAGQPLVQIDPRDYRAQAAQSVAQIDVARAN 118 Query: 136 EEAAHAQLAEQQAAIAQAKAQLASADEDARFATAEVERYTPLAASGAETRERLTTLRNQQ 195 AQ+AEQ+AAIAQA+A L +A+ +A FA +EVERY PLAASGAETRERL+ L+NQ Sbjct: 119 AAGVVAQIAEQRAAIAQAEADLNAANANAAFAASEVERYRPLAASGAETRERLSELQNQA 178 Query: 196 AQARSTVAARRAALDAAQLRVRSLQAQVRQAQAQGETAKAQYDAASVNLGYTEIRAAVDG 255 QAR+ AA RA L +AQ R+ +LQ QVRQA+AQGE A+AQ AAS N+ T +RAA DG Sbjct: 179 IQARARAAAARATLTSAQKRIATLQTQVRQAEAQGEAARAQLSAASTNVEATILRAAADG 238 Query: 256 RIGDKQVRVGQFVSPGTRMMTVVP-TRFYVSANFKETQIGIMRIGQPAIIKVDALPGVEF 314 RIGDK VR GQFV +R+MT+VP YV ANFKETQ+G+MR+GQP I+VDALPGVE Sbjct: 239 RIGDKSVRQGQFVQAASRLMTLVPKASLYVEANFKETQLGLMRVGQPVKIEVDALPGVEL 298 Query: 315 HGHVESLSPGTGAQFSLLPPQNATGNFTKIVQRLPVRVAVDATPEETRAFVAGLSVTVEV 374 G V S++PGTGAQFS+LPPQNATGNFTKIVQR+PVR+AV A PE + V G+SV V V Sbjct: 299 PGRVASIAPGTGAQFSVLPPQNATGNFTKIVQRIPVRIAVSAGPETRKLLVPGMSVEVSV 358 Query: 375 NTIAAKDELRELRERNSESNA 395 +T +A++ ++R NA Sbjct: 359 DTRSARNAAAQIRREQERHNA 379 >ref|YP_004555076.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum L-1] gb|AEG50570.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum L-1] Length = 383 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 213/359 (59%), Positives = 272/359 (75%), Gaps = 1/359 (0%) Query: 38 SPRARFILRALGLLVLVIVAAWVLYYQFRGKYLESTNDAFVQADSVTVSSKVTGYVDQVL 97 +PR R L L ++V+ W + Y+ G+Y ESTNDA+VQ+DS+T++ KV+GYVD+V Sbjct: 21 NPRVRLALLLAALALIVLGVLWFIRYEAFGRYQESTNDAYVQSDSITIAPKVSGYVDRVF 80 Query: 98 VADNQIVKAGQPLVRIDARDYSAQAAQAKAQIDAASASEEAAHAQLAEQQAAIAQAKAQL 157 V +NQ VKAGQPLV+ID RDY AQAAQ+ AQID A AS AQ+ EQ+AAIAQAKA+ Sbjct: 81 VEENQDVKAGQPLVQIDPRDYRAQAAQSVAQIDVARASAAGVAAQIEEQRAAIAQAKAER 140 Query: 158 ASADEDARFATAEVERYTPLAASGAETRERLTTLRNQQAQARSTVAARRAALDAAQLRVR 217 +A+ +A FA +E ERY PLAASGAETRERL+ L+NQ QA++ AA +AAL +AQ RV Sbjct: 141 DAANANAAFAASEAERYRPLAASGAETRERLSELQNQATQAKARAAAAQAALTSAQKRVA 200 Query: 218 SLQAQVRQAQAQGETAKAQYDAASVNLGYTEIRAAVDGRIGDKQVRVGQFVSPGTRMMTV 277 +L+AQVRQAQAQGE A+AQ AA+ ++ T +RAAVDGRIGD+ VR GQF+ TR+MT+ Sbjct: 201 TLEAQVRQAQAQGEAARAQLSAANTDVEATILRAAVDGRIGDRSVRQGQFIQAATRLMTL 260 Query: 278 VPT-RFYVSANFKETQIGIMRIGQPAIIKVDALPGVEFHGHVESLSPGTGAQFSLLPPQN 336 VP+ YV ANFKETQ+G+MR+GQP I+VDALPGVE G V S++PGTGAQFS+LPPQN Sbjct: 261 VPSASLYVEANFKETQLGLMRVGQPVTIEVDALPGVELRGRVASIAPGTGAQFSVLPPQN 320 Query: 337 ATGNFTKIVQRLPVRVAVDATPEETRAFVAGLSVTVEVNTIAAKDELRELRERNSESNA 395 ATGNFTKIVQR+PVR+A+DA PE + V G+SV V V+T +A+D ++R NA Sbjct: 321 ATGNFTKIVQRIPVRIAIDAGPETRKLLVPGMSVEVSVDTRSARDAAAQIRREQERHNA 379