BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3827.p (487 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776578.1| major facilitator superfamily permease [Herb... 793 0.0 ref|YP_003751454.1| multidrug resistance transmembrane protein [... 616 e-174 emb|CCA85010.1| putative multidrug resistance transmembrane prot... 615 e-174 emb|CCA81594.1| putative multidrug resistance transmembrane prot... 614 e-173 ref|NP_520848.1| multidrug resistance transmembrane protein [Ral... 602 e-170 >ref|YP_003776578.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ64670.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 514 Score = 793 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 478/487 (98%), Positives = 483/487 (99%) Query: 1 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 60 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT Sbjct: 28 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 87 Query: 61 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNALFG 120 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNA+FG Sbjct: 88 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNAMFG 147 Query: 121 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 180 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW Sbjct: 148 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 207 Query: 181 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 240 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR Sbjct: 208 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 267 Query: 241 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 300 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF Sbjct: 268 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 327 Query: 301 TPLLMRLVDIRIAVGTGFLLLATSAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 360 TPLLMRLVDIRIAVGTGFLLLA SAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ Sbjct: 328 TPLLMRLVDIRIAVGTGFLLLAASAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 387 Query: 361 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 420 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ Sbjct: 388 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 447 Query: 421 SGIAAQAHLLGGQDVAIQLMGATIQAQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTN 480 S + AQ HLLGGQDVA+QLMGATIQ+QALTMTYADLFWMLGVAILCVTPLVLFLRPLPT+ Sbjct: 448 SSMTAQGHLLGGQDVALQLMGATIQSQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTH 507 Query: 481 AAPVASH 487 AAPVASH Sbjct: 508 AAPVASH 514 >ref|YP_003751454.1| multidrug resistance transmembrane protein [Ralstonia solanacearum PSI07] emb|CBJ50145.1| putative multidrug resistance transmembrane protein [Ralstonia solanacearum PSI07] Length = 511 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 349/487 (71%), Positives = 413/487 (84%) Query: 1 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 60 MATLDISIVNS+LPTIQGEIGA+ TEGTWIATAYLVAEI+IIP++ WLE+LLGLR LLL Sbjct: 25 MATLDISIVNSALPTIQGEIGATSTEGTWIATAYLVAEIIIIPLAGWLEKLLGLRNLLLA 84 Query: 61 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNALFG 120 A LFT FS+LCG++ TLPMM++GR GQGFTGG LIPTAMTIIA RLPR+QQP+G ALFG Sbjct: 85 ATGLFTGFSMLCGVAKTLPMMVIGRAGQGFTGGVLIPTAMTIIAARLPRAQQPLGTALFG 144 Query: 121 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 180 +T ILGPV GP++GGW+T +SWHYAFFINLP+ A L TLLL+ +P+E+P+ L EADW Sbjct: 145 STVILGPVFGPMLGGWMTTQLSWHYAFFINLPICAVLATLLLLGMPHEKPRTALLREADW 204 Query: 181 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 240 GI GLALGLGG+TVVLEEG+R WF+SP+IRWLA S+LGF LL GQ RA PVI+L Sbjct: 205 AGITGLALGLGGMTVVLEEGQRLHWFASPEIRWLATLSMLGFALLGWGQARAHAPVIRLG 264 Query: 241 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 300 LLRDRQF ++ +MA+ +ALYGTAYVIPQFL GIAGY++LQSGWIVLLSG+PMI++MPF Sbjct: 265 LLRDRQFSAIAVMAIASSMALYGTAYVIPQFLVGIAGYDALQSGWIVLLSGLPMIVLMPF 324 Query: 301 TPLLMRLVDIRIAVGTGFLLLATSAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 360 TPL++R +D+R+AVG G +LA SA++ET LSPLS G SFVASQLMRG+GTV+ M+FLNQ Sbjct: 325 TPLMLRRLDVRLAVGCGLAMLALSAYVETGLSPLSTGNSFVASQLMRGLGTVMTMMFLNQ 384 Query: 361 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 420 AAIRSVPPS+A DASGLY+A RNLGGS+ALA IA +Q+QRLWLHSRR+E++L AN+ VQ Sbjct: 385 AAIRSVPPSRASDASGLYNALRNLGGSIALACIATLQEQRLWLHSRRIEDTLPANAAGVQ 444 Query: 421 SGIAAQAHLLGGQDVAIQLMGATIQAQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTN 480 IA+QAHLLGGQ A+ M TIQ QALTMTYADLFW+L VAIL VTPLV+FLRPLP N Sbjct: 445 DYIASQAHLLGGQTAALLSMEQTIQVQALTMTYADLFWLLSVAILLVTPLVVFLRPLPRN 504 Query: 481 AAPVASH 487 A PV H Sbjct: 505 AGPVTGH 511 >emb|CCA85010.1| putative multidrug resistance transmembrane protein [Ralstonia syzygii R24] Length = 511 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 349/487 (71%), Positives = 413/487 (84%) Query: 1 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 60 MATLDISIVNS+LPTIQGEIGA+ TEGTWIATAYLVAEI+IIP++ WLE+LLGLR LLL Sbjct: 25 MATLDISIVNSALPTIQGEIGATSTEGTWIATAYLVAEIIIIPLAGWLEKLLGLRNLLLA 84 Query: 61 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNALFG 120 A LFT FS+LCG++ TLPMM++GR GQGFTGG LIPTAMTIIA RLPR+QQP+G ALFG Sbjct: 85 ATGLFTGFSMLCGVAKTLPMMVIGRAGQGFTGGVLIPTAMTIIAARLPRAQQPLGTALFG 144 Query: 121 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 180 +T ILGPV GP++GGW+T +SWHYAFFINLP+ A L TLLL+ +P+E+P+ L EADW Sbjct: 145 STVILGPVFGPMLGGWMTTQLSWHYAFFINLPICAVLATLLLLGMPHEKPRAALLREADW 204 Query: 181 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 240 GI GLALGLGG+TVVLEEG+R WF+SP+IRWLA S+LGF LL GQ RA PVI+L Sbjct: 205 AGITGLALGLGGMTVVLEEGQRLHWFASPEIRWLATLSMLGFALLGWGQARAHAPVIRLG 264 Query: 241 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 300 LLRDRQF ++ +MA+ +ALYGTAYVIPQFL GIAGY++LQSGWIVLLSG+PMI++MPF Sbjct: 265 LLRDRQFSAIAVMAIASSMALYGTAYVIPQFLVGIAGYDALQSGWIVLLSGLPMIVLMPF 324 Query: 301 TPLLMRLVDIRIAVGTGFLLLATSAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 360 TPL++R +D+R+AVG G +LA SA++ET LSPLS G SFVASQLMRG+GTV+ M+FLNQ Sbjct: 325 TPLMLRRLDVRLAVGCGLAMLALSAYVETGLSPLSTGSSFVASQLMRGLGTVMTMMFLNQ 384 Query: 361 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 420 AAIRSVPPS+A DASGLY+A RNLGGS+ALA IA +Q+QRLWLHSRR+E++L AN+ VQ Sbjct: 385 AAIRSVPPSRASDASGLYNALRNLGGSIALACIATLQEQRLWLHSRRIEDTLPANAAGVQ 444 Query: 421 SGIAAQAHLLGGQDVAIQLMGATIQAQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTN 480 +A QAHLLGGQ A+ M TIQ QALTMTYADLFW+L VAIL VTPLV+FLRPLP N Sbjct: 445 DYVAGQAHLLGGQTAALLSMEQTIQVQALTMTYADLFWLLSVAILLVTPLVVFLRPLPRN 504 Query: 481 AAPVASH 487 A PVA H Sbjct: 505 AGPVAGH 511 >emb|CCA81594.1| putative multidrug resistance transmembrane protein [blood disease bacterium R229] Length = 511 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 347/487 (71%), Positives = 413/487 (84%) Query: 1 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 60 MATLDISIVNS+LPTIQGEIGA+ TEGTWIATAYLVAEI+IIP++ WLE+LLGLR LLL Sbjct: 25 MATLDISIVNSALPTIQGEIGATSTEGTWIATAYLVAEIIIIPLAGWLEKLLGLRNLLLA 84 Query: 61 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNALFG 120 A LFT FS+LCG++ TLPMM++GR GQGFTGG LIPTAMTIIA RLPR+QQP+G ALFG Sbjct: 85 ATGLFTGFSMLCGVAKTLPMMVIGRAGQGFTGGVLIPTAMTIIAARLPRAQQPLGTALFG 144 Query: 121 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 180 +T ILGPV GP++GGW+T +SWHYAFFINLP+ A L TLLL+ +P+E+P+ L EADW Sbjct: 145 STVILGPVFGPMLGGWMTTQLSWHYAFFINLPICAVLATLLLLGMPHEKPRTALLREADW 204 Query: 181 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 240 GI GLALGLGG+TVVLE+G+R WF+SP+IRWLA S+LGF LL GQ RA PVI+L Sbjct: 205 AGITGLALGLGGMTVVLEDGQRLHWFASPEIRWLATLSMLGFALLGWGQARAHAPVIRLG 264 Query: 241 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 300 LLRDRQF ++ +MA+ +ALYGTAYVIPQFL GIAGY++LQSGWIVLLSG+PMI++MPF Sbjct: 265 LLRDRQFSAIAVMAIASSMALYGTAYVIPQFLVGIAGYDALQSGWIVLLSGLPMIVLMPF 324 Query: 301 TPLLMRLVDIRIAVGTGFLLLATSAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 360 TPL++R +D+R+AVG G +LA SA++ET LSPLS G SFVASQLMRG+GTV+ M+FLNQ Sbjct: 325 TPLMLRRLDVRLAVGCGLAMLALSAYVETGLSPLSTGNSFVASQLMRGLGTVMTMMFLNQ 384 Query: 361 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 420 AAIRSVPPS+A DASGLY+A RNLGGS+ALA IA +Q+QRLWLHSRR+E++L AN+ VQ Sbjct: 385 AAIRSVPPSRASDASGLYNALRNLGGSIALACIATLQEQRLWLHSRRVEDTLPANAAGVQ 444 Query: 421 SGIAAQAHLLGGQDVAIQLMGATIQAQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTN 480 +A+QAHLLGGQ A+ M TIQ QALTMTYADLFW+L VAIL VTPLV+FLRPLP N Sbjct: 445 DYVASQAHLLGGQTAALLSMEQTIQVQALTMTYADLFWLLSVAILLVTPLVVFLRPLPRN 504 Query: 481 AAPVASH 487 A PV H Sbjct: 505 AGPVTGH 511 >ref|NP_520848.1| multidrug resistance transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD16434.1| probable multidrug resistance transmembrane protein [Ralstonia solanacearum GMI1000] Length = 511 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 349/487 (71%), Positives = 409/487 (83%) Query: 1 MATLDISIVNSSLPTIQGEIGASGTEGTWIATAYLVAEIVIIPMSAWLERLLGLRVLLLT 60 MATLDISIVNS+LPTIQGEIGA+ TEGTWIATAYLVAEI+IIP++ WLE+LLGLR LLL Sbjct: 25 MATLDISIVNSALPTIQGEIGATSTEGTWIATAYLVAEIIIIPLAGWLEKLLGLRNLLLA 84 Query: 61 AASLFTLFSVLCGLSTTLPMMIVGRVGQGFTGGALIPTAMTIIATRLPRSQQPVGNALFG 120 A LFT FS+LCG++ TLPMM++GR GQGFTGG LIPTAMTIIA RLPR+QQP+G ALFG Sbjct: 85 ATGLFTGFSMLCGVAETLPMMVIGRAGQGFTGGVLIPTAMTIIAARLPRAQQPLGTALFG 144 Query: 121 ATAILGPVLGPVMGGWLTENVSWHYAFFINLPVGAALITLLLVAIPYERPKFEQLAEADW 180 +T ILGPV GP++GGW+T ++WHYAFFINLP+ L LLL+ +P+ERP+ L EADW Sbjct: 145 STVILGPVFGPMLGGWMTTQLNWHYAFFINLPICGVLAALLLLGMPHERPRTALLREADW 204 Query: 181 FGIAGLALGLGGLTVVLEEGEREQWFSSPDIRWLAATSVLGFILLAIGQVRARHPVIQLR 240 GIAGLALGLGG+TVVLEEG+R QWF+SP IRWLAA S LGF LL GQ RAR PVI+L Sbjct: 205 AGIAGLALGLGGMTVVLEEGQRLQWFTSPAIRWLAAVSALGFGLLGWGQARARAPVIRLG 264 Query: 241 LLRDRQFGSVVMMAMIVGVALYGTAYVIPQFLSGIAGYNSLQSGWIVLLSGVPMILMMPF 300 LLRDRQFG++ +MA+ +ALYGTAYVIPQFL GIAGY++LQSGWIVLLSG+PMI++MP Sbjct: 265 LLRDRQFGAIAVMAIAASMALYGTAYVIPQFLVGIAGYDALQSGWIVLLSGLPMIVLMPM 324 Query: 301 TPLLMRLVDIRIAVGTGFLLLATSAFIETDLSPLSYGGSFVASQLMRGVGTVLAMLFLNQ 360 PL++R +D+R+AVG G L+LA SA+IET LSPLS G SFVASQLMRG+GTVL M+FLNQ Sbjct: 325 LPLMLRWLDVRLAVGGGLLVLALSAYIETGLSPLSTGNSFVASQLMRGLGTVLTMMFLNQ 384 Query: 361 AAIRSVPPSQAGDASGLYSAARNLGGSLALAAIAVIQDQRLWLHSRRLEESLNANSDLVQ 420 AAIRSVPPSQA DASGLY+ RNLGGS+ALA IA +Q+QRLWLHSRR+E++L AN+ VQ Sbjct: 385 AAIRSVPPSQASDASGLYNGLRNLGGSIALACIATLQEQRLWLHSRRIEDTLQANAAGVQ 444 Query: 421 SGIAAQAHLLGGQDVAIQLMGATIQAQALTMTYADLFWMLGVAILCVTPLVLFLRPLPTN 480 IA QAH LG Q A+ M +IQ QALTM YADLFW+L VAIL VTPLV+FLRPLP + Sbjct: 445 DYIAGQAHALGSQAAALLSMEQSIQVQALTMAYADLFWLLTVAILLVTPLVVFLRPLPRH 504 Query: 481 AAPVASH 487 A PVA H Sbjct: 505 AGPVAGH 511