BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3816.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776569.1| oligopeptide ABC transporter ATPase [Herbasp... 487 e-135 ref|YP_999443.1| ABC transporter-like protein [Verminephrobacter... 408 e-112 ref|YP_002989084.1| ABC transporter [Dickeya dadantii Ech703] >g... 397 e-108 ref|YP_004119006.1| ABC transporter-like protein [Pantoea sp. At... 394 e-108 ref|YP_003881232.1| ABC transporter ATP-binding protein [Dickeya... 394 e-108 >ref|YP_003776569.1| oligopeptide ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64661.1| ABC-type oligopeptide transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 280 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 257/280 (91%), Positives = 265/280 (94%) Query: 1 MNTSLTPRPPLDDIALELCALSKVYPLKRGLFQAPGELKAVDDVSLRLYRGETLGLVGES 60 M+ S PLDDIALELCAL+KVYPLKRGLFQ PG+LKAV+DVSLRLYRGETLGLVGES Sbjct: 1 MSNSHQAPAPLDDIALELCALTKVYPLKRGLFQPPGQLKAVNDVSLRLYRGETLGLVGES 60 Query: 61 GCGKSTLAKMLLGLLAPTSGNVLINGQEVDPTERRAHARHIQPIFQDPYSSLNPRKTVGE 120 GCGKSTLAKMLLGLL PTSGNVLINGQEVDPTER+AHARHIQPIFQDPYSSLNPRKTV E Sbjct: 61 GCGKSTLAKMLLGLLPPTSGNVLINGQEVDPTERKAHARHIQPIFQDPYSSLNPRKTVAE 120 Query: 121 IVGLPLKLHGIGNAAERNGQVRQILDLVGMPERTHTQYPNQLSGGQRQRVAIARALILRP 180 IVGLPLKLHGIGNAAERN QV+ ILDLVGMPERTH QYPNQLSGGQRQRVAIARALILRP Sbjct: 121 IVGLPLKLHGIGNAAERNRQVKDILDLVGMPERTHAQYPNQLSGGQRQRVAIARALILRP 180 Query: 181 DILICDEPTSALDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNKGSI 240 DILICDEPTSALDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMN+GSI Sbjct: 181 DILICDEPTSALDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNQGSI 240 Query: 241 VELASREQLFSDPQHPYTRMLLASALTPDPGLGIPALAAA 280 VEL SREQLFS+PQH YTRMLLASALTPDPG GIPALAAA Sbjct: 241 VELQSREQLFSEPQHLYTRMLLASALTPDPGRGIPALAAA 280 >ref|YP_999443.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM60425.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 273 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 208/267 (77%), Positives = 243/267 (91%) Query: 14 IALELCALSKVYPLKRGLFQAPGELKAVDDVSLRLYRGETLGLVGESGCGKSTLAKMLLG 73 IALELCALSKVY L+RG+F+ E++AV+ VSLRL+RG+TLGLVGESGCGKSTLA+MLLG Sbjct: 6 IALELCALSKVYTLERGMFKPAAEIRAVNAVSLRLHRGQTLGLVGESGCGKSTLARMLLG 65 Query: 74 LLAPTSGNVLINGQEVDPTERRAHARHIQPIFQDPYSSLNPRKTVGEIVGLPLKLHGIGN 133 LL P++G+VL+NGQ+V P R+ +AR IQPIFQDPYSSLNPRKTV +IVGLPLKLH IGN Sbjct: 66 LLEPSAGHVLVNGQQVGPARRKENARCIQPIFQDPYSSLNPRKTVADIVGLPLKLHRIGN 125 Query: 134 AAERNGQVRQILDLVGMPERTHTQYPNQLSGGQRQRVAIARALILRPDILICDEPTSALD 193 +A++ VR++LDLVGMP+RT + YPNQLSGGQRQRVAIARALIL+P+IL+CDEPTS+LD Sbjct: 126 SAQQTRSVRRMLDLVGMPQRTDSHYPNQLSGGQRQRVAIARALILQPEILVCDEPTSSLD 185 Query: 194 VSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNKGSIVELASREQLFSDP 253 VSVQAQILNLLLDLKAEFGL YLFISHDLGVVEHL D+VAVM+KGSIVEL SRE++F + Sbjct: 186 VSVQAQILNLLLDLKAEFGLAYLFISHDLGVVEHLADQVAVMHKGSIVELESRERIFCNA 245 Query: 254 QHPYTRMLLASALTPDPGLGIPALAAA 280 QHPYTRMLLASALTP+PGLGIP LAA+ Sbjct: 246 QHPYTRMLLASALTPEPGLGIPELAAS 272 >ref|YP_002989084.1| ABC transporter [Dickeya dadantii Ech703] gb|ACS87262.1| ABC transporter related [Dickeya dadantii Ech703] Length = 288 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 206/271 (76%), Positives = 231/271 (85%) Query: 9 PPLDDIALELCALSKVYPLKRGLFQAPGELKAVDDVSLRLYRGETLGLVGESGCGKSTLA 68 P DDIALELCALS+ + L RGLF PGE+ AVD+VSLR+ RGETLGLVGESGCGKSTLA Sbjct: 17 PGNDDIALELCALSRTFRLNRGLFSRPGEITAVDNVSLRIRRGETLGLVGESGCGKSTLA 76 Query: 69 KMLLGLLAPTSGNVLINGQEVDPTERRAHARHIQPIFQDPYSSLNPRKTVGEIVGLPLKL 128 KMLLGLL PTSGNVLI G+E+D RRA A IQPIFQDPYSSLNPR+TV +IV + L+L Sbjct: 77 KMLLGLLPPTSGNVLIEGREIDAGNRRAMATRIQPIFQDPYSSLNPRRTVADIVEVALRL 136 Query: 129 HGIGNAAERNGQVRQILDLVGMPERTHTQYPNQLSGGQRQRVAIARALILRPDILICDEP 188 H IG AER +VR++LD+VGMP RTH+QYP QLSGGQRQRVAIARALIL+PDILICDEP Sbjct: 137 HDIGTPAERKTRVREMLDVVGMPSRTHSQYPGQLSGGQRQRVAIARALILQPDILICDEP 196 Query: 189 TSALDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNKGSIVELASREQ 248 TSALDVSVQAQILNLLL LK E GLTYLFISH+L VVEHLVD VAVM KG +VE +REQ Sbjct: 197 TSALDVSVQAQILNLLLSLKKELGLTYLFISHNLSVVEHLVDHVAVMRKGRLVEQGTREQ 256 Query: 249 LFSDPQHPYTRMLLASALTPDPGLGIPALAA 279 +F+ PQHPYTR+LLAS LTP+PGLGIP + A Sbjct: 257 VFNAPQHPYTRVLLASVLTPEPGLGIPEIDA 287 >ref|YP_004119006.1| ABC transporter-like protein [Pantoea sp. At-9b] gb|ADU72450.1| ABC transporter related protein [Pantoea sp. At-9b] Length = 283 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 201/266 (75%), Positives = 231/266 (86%) Query: 12 DDIALELCALSKVYPLKRGLFQAPGELKAVDDVSLRLYRGETLGLVGESGCGKSTLAKML 71 +DIALELCALS+ + L RGLF++P E++AV++VSLR+ RGETLGLVGESGCGKSTLAKML Sbjct: 13 EDIALELCALSRTFRLNRGLFKSPAEIRAVENVSLRIRRGETLGLVGESGCGKSTLAKML 72 Query: 72 LGLLAPTSGNVLINGQEVDPTERRAHARHIQPIFQDPYSSLNPRKTVGEIVGLPLKLHGI 131 LGLL PT+GNVLI G+EVD +RR + IQPIFQDPYSSLNPR+TV ++V + L+LH I Sbjct: 73 LGLLPPTTGNVLIEGREVDAADRRKLSARIQPIFQDPYSSLNPRRTVADVVEVALRLHNI 132 Query: 132 GNAAERNGQVRQILDLVGMPERTHTQYPNQLSGGQRQRVAIARALILRPDILICDEPTSA 191 G AAER QVR++LDLVGMP RTH+QYP QLSGGQRQRVAIARALILRP+ILICDEPTSA Sbjct: 133 GTAAERKKQVREMLDLVGMPSRTHSQYPGQLSGGQRQRVAIARALILRPEILICDEPTSA 192 Query: 192 LDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNKGSIVELASREQLFS 251 LDVSVQAQILNLLL LK EF LTYLFISH+L VVEHLVD VAVM KG IVE +REQ+F+ Sbjct: 193 LDVSVQAQILNLLLALKQEFSLTYLFISHNLSVVEHLVDHVAVMRKGQIVEQGTREQIFN 252 Query: 252 DPQHPYTRMLLASALTPDPGLGIPAL 277 PQHPYTR LLAS +TP+PGLGIP + Sbjct: 253 QPQHPYTRALLASVMTPEPGLGIPEI 278 >ref|YP_003881232.1| ABC transporter ATP-binding protein [Dickeya dadantii 3937] gb|ADM96675.1| ATP-binding protein of ABC transporter [Dickeya dadantii 3937] Length = 287 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 205/272 (75%), Positives = 232/272 (85%) Query: 9 PPLDDIALELCALSKVYPLKRGLFQAPGELKAVDDVSLRLYRGETLGLVGESGCGKSTLA 68 P DDIALELCALS+V+ L RGLF PGE++AVD+VSLR+ RGETLGLVGESGCGKSTLA Sbjct: 16 PGNDDIALELCALSRVFRLNRGLFSRPGEIRAVDNVSLRIRRGETLGLVGESGCGKSTLA 75 Query: 69 KMLLGLLAPTSGNVLINGQEVDPTERRAHARHIQPIFQDPYSSLNPRKTVGEIVGLPLKL 128 KMLLGLL PTSGNVLI G+E+D +RR A IQPIFQDPYSSLNPR+TV +IV + L+L Sbjct: 76 KMLLGLLPPTSGNVLIEGREIDAGDRRELASRIQPIFQDPYSSLNPRRTVADIVEVALRL 135 Query: 129 HGIGNAAERNGQVRQILDLVGMPERTHTQYPNQLSGGQRQRVAIARALILRPDILICDEP 188 H IG +R +VR++LD+VGMPERTH QYP QLSGGQRQRVAIARALIL+P+ILICDEP Sbjct: 136 HNIGTPTQRKQRVREMLDVVGMPERTHGQYPGQLSGGQRQRVAIARALILQPEILICDEP 195 Query: 189 TSALDVSVQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNKGSIVELASREQ 248 TSALDVSVQAQILNLLL LK EFGLTYLFISH+L VVE+LVD VAVM KG+IVE +REQ Sbjct: 196 TSALDVSVQAQILNLLLTLKKEFGLTYLFISHNLSVVEYLVDHVAVMRKGTIVEQGTREQ 255 Query: 249 LFSDPQHPYTRMLLASALTPDPGLGIPALAAA 280 +F PQHPYTR LLAS LTP+PGLGIP + A Sbjct: 256 VFGAPQHPYTRALLASVLTPEPGLGIPDIGVA 287