BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3797.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum serop... 400 e-110 ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas ... 339 3e-91 ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp... 325 5e-87 ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimon... 321 6e-86 ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobactera... 313 1e-83 >ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ64641.1| uracil DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 226/260 (86%), Positives = 237/260 (91%) Query: 20 STLPAPLSDLIQTAHPSWHAALRAGLEAIQQADPAYLPTLAQDDYLPTEGRLFAAFTQPM 79 ++LPA L+DLI TAHPSWHAALRAGL+AI QADP YL LA D YLPTEGRLFAAF QPM Sbjct: 6 ASLPAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPM 65 Query: 80 DQVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAEG 139 D+VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVA+G Sbjct: 66 DRVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADG 125 Query: 140 ALQAGQTSGDALAGIAAQAQADVEGSIQTLADLQDNLTAQGFLLLNASLVFRSHVAPVKD 199 +QAGQTSGDALA +AAQAQADV G+IQTLADLQDNLTAQGFLLLNASLVFR+HVAPVKD Sbjct: 126 RVQAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKD 185 Query: 200 AKGWKPFFETVLRALAEHGQAQGKTLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHPYNLS 259 AK WKPFFETVLRALAEHG +QGKTLPTLVLWGKIAEQL LPLV FPRAVAEHPYNLS Sbjct: 186 AKAWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLS 245 Query: 260 FIEHSGMQQLFAPMQLLKKR 279 FIEHSGMQ LF M LL KR Sbjct: 246 FIEHSGMQALFGAMHLLDKR 265 >ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] gb|AEK62959.1| conserved hypothetical protein; putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] Length = 262 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 177/257 (68%), Positives = 206/257 (80%) Query: 22 LPAPLSDLIQTAHPSWHAALRAGLEAIQQADPAYLPTLAQDDYLPTEGRLFAAFTQPMDQ 81 LPA + + H SW A L GL A+ QA+PAYL LA DYLPTEGR+FAAFTQP++ Sbjct: 5 LPASIRSALTGVHASWLAILEHGLRAVAQANPAYLKDLAAADYLPTEGRMFAAFTQPLEA 64 Query: 82 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAEGAL 141 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVA+G L Sbjct: 65 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGQL 124 Query: 142 QAGQTSGDALAGIAAQAQADVEGSIQTLADLQDNLTAQGFLLLNASLVFRSHVAPVKDAK 201 T+GDA++ +A QAQ D +IQ LADLQDN+ +GFLLLNASLVFR V PVKDAK Sbjct: 125 ALENTTGDAMSDVALQAQKDGSQAIQLLADLQDNMVKRGFLLLNASLVFRPDVPPVKDAK 184 Query: 202 GWKPFFETVLRALAEHGQAQGKTLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHPYNLSFI 261 W+PF + VL+ LA+ +G+ LPTLVLWGKIAEQL+ P+ A+FP+AVAEHPYNLSFI Sbjct: 185 AWQPFMQAVLQGLADAADKRGEDLPTLVLWGKIAEQLNAYPVTARFPKAVAEHPYNLSFI 244 Query: 262 EHSGMQQLFAPMQLLKK 278 ++GMQ LF PMQLL++ Sbjct: 245 GNAGMQALFGPMQLLRR 261 >ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] gb|ABR90553.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] Length = 261 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 174/257 (67%), Positives = 200/257 (77%) Query: 22 LPAPLSDLIQTAHPSWHAALRAGLEAIQQADPAYLPTLAQDDYLPTEGRLFAAFTQPMDQ 81 +P ++ A SW L AGL A+Q+A P YLPTLA DD+LP GRLFAAF+QP+ Sbjct: 5 IPPSFVAMLDAADASWCPVLLAGLNAVQKASPDYLPTLATDDFLPNAGRLFAAFSQPLAA 64 Query: 82 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAEGAL 141 VRYVLVGEGPYPR SATGVCFMDGAV SLWS+KGLSKQVNRATSLRNFMKMLLVA+G L Sbjct: 65 VRYVLVGEGPYPRPDSATGVCFMDGAVSSLWSDKGLSKQVNRATSLRNFMKMLLVADGQL 124 Query: 142 QAGQTSGDALAGIAAQAQADVEGSIQTLADLQDNLTAQGFLLLNASLVFRSHVAPVKDAK 201 QT+GDALAG++ +AQA + IQTL +LQD LT GFLLLNASLVFR+HVAPVKDAK Sbjct: 125 SIEQTTGDALAGVSQKAQAAPDSVIQTLPELQDKLTEHGFLLLNASLVFRAHVAPVKDAK 184 Query: 202 GWKPFFETVLRALAEHGQAQGKTLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHPYNLSFI 261 W PF +TVL ALA+H Q G+T PTLVLWGKIA QL LP +FP+ V+EHPYNLSFI Sbjct: 185 AWLPFLQTVLAALADHAQQAGQTPPTLVLWGKIAVQLEALPESGRFPKKVSEHPYNLSFI 244 Query: 262 EHSGMQQLFAPMQLLKK 278 ++ MQ+LF M LLKK Sbjct: 245 GNAVMQELFGAMHLLKK 261 >ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimonas arsenicoxydans] emb|CAL62376.1| Putative uracil DNA glycosylase [Herminiimonas arsenicoxydans] Length = 264 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 172/260 (66%), Positives = 197/260 (75%) Query: 21 TLPAPLSDLIQTAHPSWHAALRAGLEAIQQADPAYLPTLAQDDYLPTEGRLFAAFTQPMD 80 T+P ++ A SW LRAGL+A+ + P YLP LA D+YLP GRLFAAF QP+D Sbjct: 4 TIPPSFIAMLDAADASWRPILRAGLDAVHKTSPDYLPALAADEYLPNGGRLFAAFAQPLD 63 Query: 81 QVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAEGA 140 V YVLVGEGPYPRA SATGVCFMDGAV SLWSEKGLSKQVNRATSLRNFMKMLLVA+G Sbjct: 64 AVDYVLVGEGPYPRAVSATGVCFMDGAVSSLWSEKGLSKQVNRATSLRNFMKMLLVADGQ 123 Query: 141 LQAGQTSGDALAGIAAQAQADVEGSIQTLADLQDNLTAQGFLLLNASLVFRSHVAPVKDA 200 L QT+GDALAG++ +AQA IQTL +LQ NLT GFLLLNA+LVFR HV PVK+A Sbjct: 124 LAIEQTTGDALAGVSGKAQAAPASIIQTLPELQANLTRHGFLLLNAALVFRPHVPPVKEA 183 Query: 201 KGWKPFFETVLRALAEHGQAQGKTLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHPYNLSF 260 + W PF +TVL ALA+H + GKT PTLVLWGKIA QL P A+FP+ V+EHPYNLSF Sbjct: 184 RAWLPFLQTVLAALADHAEDAGKTPPTLVLWGKIAVQLEAFPESARFPKKVSEHPYNLSF 243 Query: 261 IEHSGMQQLFAPMQLLKKRA 280 I + MQ LF MQLLKK + Sbjct: 244 IGNQVMQNLFGDMQLLKKNS 263 >ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32847.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 261 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 175/256 (68%), Positives = 196/256 (76%), Gaps = 5/256 (1%) Query: 22 LPAPLSDLIQTAHPSWHAALRAGLEAIQQADPAYLPTLAQDDYLPTEGRLFAAFTQPMDQ 81 +PA + I+ A PSW L AGL+A+ ADPAYL LAQDDYLPTEGRL +AF QP + Sbjct: 2 IPAAILATIERADPSWQPILMAGLKAVNLADPAYLLALAQDDYLPTEGRLLSAFAQPFES 61 Query: 82 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAEGAL 141 VRYVLVGEGPYPRAASATGVCFMDGAV LWS+KGLSK VNRATSLRNFMKMLLVA+G L Sbjct: 62 VRYVLVGEGPYPRAASATGVCFMDGAVDLLWSDKGLSKPVNRATSLRNFMKMLLVADGTL 121 Query: 142 QAGQTSGDALAGIAAQAQADVEGSIQTLADLQDNLTAQGFLLLNASLVFRSHVAPVKDAK 201 AGQTSG+A+ AQA I+TLA LQ+NLT QGFLLLNA+LVFRSHV PV+DA+ Sbjct: 122 AAGQTSGEAMIVAGAQALQPGADRIRTLAQLQENLTRQGFLLLNAALVFRSHVPPVRDAR 181 Query: 202 GWKPFFETVLRALAEHGQAQGKTLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHPYNLSFI 261 W PF TVL ALA+ PTLVLWGKIA QL LP + FPR AEHPYNLSFI Sbjct: 182 AWLPFLNTVLAALADQVAP-----PTLVLWGKIAAQLDDLPCINGFPRLTAEHPYNLSFI 236 Query: 262 EHSGMQQLFAPMQLLK 277 E+S MQ+LFAPMQLL+ Sbjct: 237 ENSSMQKLFAPMQLLQ 252