BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3791.p (565 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776543.1| D-galactonate transporter protein [Herbaspir... 802 0.0 ref|YP_004750897.1| D-galactarate permease [Collimonas fungivora... 635 e-180 ref|YP_276369.1| major facilitator superfamily transporter phtha... 623 e-176 ref|ZP_05636141.1| major facilitator superfamily transporter pht... 622 e-176 ref|ZP_06459609.1| major facilitator superfamily transporter pht... 621 e-176 >ref|YP_003776543.1| D-galactonate transporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ64635.1| D-galactonate transporter protein [Herbaspirillum seropedicae SmR1] Length = 439 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 412/432 (95%), Positives = 423/432 (97%) Query: 132 GKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAFSWAYVLA 191 KPTH+RYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPV MGYIFSAFSWAYVLA Sbjct: 6 AKPTHVRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVMMGYIFSAFSWAYVLA 65 Query: 192 QLPGGWLLDRFGSKKIYMWSIALWSFFTFLQAGVTWMSTGAAVIALFLLRFMVGLAEAPS 251 QLPGGWLLDRFGSKKIYMWSIALWS FTFLQAGVTWMST AAV +LFLLRFMVGLAEAPS Sbjct: 66 QLPGGWLLDRFGSKKIYMWSIALWSVFTFLQAGVTWMSTAAAVASLFLLRFMVGLAEAPS 125 Query: 252 FPANGRIVAAWFPTKERGTASAIFNSAQYFAAVIFTPLMAWIVHTYSWHHVFTVMGVVGI 311 FPANGRIVAAWFPTKERGTASAIFNSAQYFAAV+FTPLMAWIVHTYSWHHVFTVMGVVGI Sbjct: 126 FPANGRIVAAWFPTKERGTASAIFNSAQYFAAVLFTPLMAWIVHTYSWHHVFTVMGVVGI 185 Query: 312 LLAMVWGKIIYSPKDHPRINPAELEHIESGGGLVDMDNKKVAAPSTKGKGYIRQLLSNRM 371 LA++WG+IIYSPKDHPRIN AEL HIESGGGLVDMDN+KVAAPSTKG+GYIRQLLSNRM Sbjct: 186 ALALIWGRIIYSPKDHPRINQAELAHIESGGGLVDMDNRKVAAPSTKGRGYIRQLLSNRM 245 Query: 372 LLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGGLISD 431 LLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGGLISD Sbjct: 246 LLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGGLISD 305 Query: 432 RLIKSGMSVTWARKIPIVGGMLLSMTMILCNYVDAQWMVVGIMALAFFGKGVGALGWAVV 491 RLIK G+SVTWARKIPIVGGMLLSMTMILCNYV+AQWMVVGIMALAFFGKGVGALGWAVV Sbjct: 306 RLIKRGLSVTWARKIPIVGGMLLSMTMILCNYVEAQWMVVGIMALAFFGKGVGALGWAVV 365 Query: 492 ADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFAGALVFVGINALVTVISYL 551 ADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSF+GALVFVGINALVTVISYL Sbjct: 366 ADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFSGALVFVGINALVTVISYL 425 Query: 552 VIVKEIKRVELK 563 VIVKEIKRVELK Sbjct: 426 VIVKEIKRVELK 437 >ref|YP_004750897.1| D-galactarate permease [Collimonas fungivorans Ter331] gb|AEK60074.1| D-galactarate permease [Collimonas fungivorans Ter331] Length = 471 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 330/450 (73%), Positives = 374/450 (83%), Gaps = 11/450 (2%) Query: 127 SGAAAGKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAFSW 186 +G A +RY+ILF+LF VTT NYADRA LSIAG+AMK EL D VTMG+IFSAFSW Sbjct: 7 AGPAIAPRGKLRYMILFMLFAVTTFNYADRAILSIAGTAMKGELGFDAVTMGFIFSAFSW 66 Query: 187 AYVLAQLPGGWLLDRFGSKKIYMWSIALWSFFTFLQAGVTWMSTGAAVIALFLLRFMVGL 246 AYVL QLPGGWLLDR+GSK++Y SI +WS FT LQ GV ++ AV ALF+LRFMVGL Sbjct: 67 AYVLGQLPGGWLLDRYGSKRVYAASIFIWSLFTLLQGGVHFLGVLWAVPALFMLRFMVGL 126 Query: 247 AEAPSFPANGRIVAAWFPTKERGTASAIFNSAQYFAAVIFTPLMAWIVHTYSWHHVFTVM 306 AEAPSFPANGRIVAAWFPT ERGTASAIFNSAQYFA V+F PLMAWI H Y W F VM Sbjct: 127 AEAPSFPANGRIVAAWFPTTERGTASAIFNSAQYFATVLFAPLMAWITHAYGWSETFVVM 186 Query: 307 GVVGILLAMVWGKIIYSPKDHPRINPAELEHIESGGGLVDMDN---KKVAAPSTKGK--- 360 G G++L+MVW +++YSPKDHPR+ PAEL HI GGGLVDMD ++ + KG Sbjct: 187 GAAGLVLSMVWMQVMYSPKDHPRMTPAELAHIRDGGGLVDMDQGLGQRQGRAAGKGPQVN 246 Query: 361 -----GYIRQLLSNRMLLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIP 415 GY++QLLSNRML GVY+GQYCIN ITYFFLTWFP+YLVQERGMSILKAG VAS+P Sbjct: 247 RGVKLGYLKQLLSNRMLAGVYLGQYCINTITYFFLTWFPIYLVQERGMSILKAGIVASLP 306 Query: 416 AVCGFIGGVVGGLISDRLIKSGMSVTWARKIPIVGGMLLSMTMILCNYVDAQWMVVGIMA 475 A+CGF+GGV+GGLISDRLIK G S+TWARKIPIV G+LLS TMILCNYVD QWMVVGIMA Sbjct: 307 AICGFLGGVLGGLISDRLIKRGFSLTWARKIPIVAGLLLSTTMILCNYVDTQWMVVGIMA 366 Query: 476 LAFFGKGVGALGWAVVADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFAGA 535 LAFFGKGVGALGWAVVADT+PK+I+GL+G LFNMFGN+AGIT PIVIGYI+K+TGSF A Sbjct: 367 LAFFGKGVGALGWAVVADTSPKEIIGLTGSLFNMFGNIAGITAPIVIGYIIKQTGSFEWA 426 Query: 536 LVFVGINALVTVISYLVIVKEIKRVELKPL 565 LV+VG NAL+ VISYLVIVK+IKRVELKPL Sbjct: 427 LVYVGANALLAVISYLVIVKDIKRVELKPL 456 >ref|YP_276369.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. phaseolicola 1448A] gb|AAZ35003.1| MFS transporter, phthalate permease family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 461 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 305/436 (69%), Positives = 361/436 (82%), Gaps = 5/436 (1%) Query: 133 KPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAFSWAYVLAQ 192 KPTH+RYLIL +LF+VTT+NYADRAT++IAGS+++ +L + PVT+GYIFSAF WAYV Q Sbjct: 5 KPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGITPVTLGYIFSAFGWAYVAGQ 64 Query: 193 LPGGWLLDRFGSKKIYMWSIALWSFFTFLQAGVTWMSTGAAVIALFLLRFMVGLAEAPSF 252 +PGGWLLDRFGSKK+Y SI WS FT LQ V A++ALF+LRF+VGLAEAPSF Sbjct: 65 IPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGISTAIVALFMLRFLVGLAEAPSF 124 Query: 253 PANGRIVAAWFPTKERGTASAIFNSAQYFAAVIFTPLMAWIVHTYSWHHVFTVMGVVGIL 312 P N RIVAAWFPT ERGTASAIFNSAQYFA V+F PLM WIV+TY W HVF VMG VGIL Sbjct: 125 PGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAVGIL 184 Query: 313 LAMVWGKIIYSPKDHPRINPAELEHIESGGGLVDMD-NKKVAAPSTKGKG----YIRQLL 367 +M+W K+IY P++HP IN AELEHI S G LVD+D +K A T G YIRQLL Sbjct: 185 FSMIWMKVIYGPRNHPMINEAELEHISSNGALVDLDQDKGKGAQKTASSGPKWDYIRQLL 244 Query: 368 SNRMLLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGG 427 +NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CGFIGGV+GG Sbjct: 245 TNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICGFIGGVLGG 304 Query: 428 LISDRLIKSGMSVTWARKIPIVGGMLLSMTMILCNYVDAQWMVVGIMALAFFGKGVGALG 487 +ISD L++ G S+T+ARK+PI+GG+LLS +++ CNYVD +W+VVG MALAFFGKGVGALG Sbjct: 305 IISDYLLRKGHSLTFARKVPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFFGKGVGALG 364 Query: 488 WAVVADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFAGALVFVGINALVTV 547 WAV++D +PKQI GLSGGLFN FGN+A ITTPIVIGYI+ TGSF ALVFVG NAL+ V Sbjct: 365 WAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFVGANALLAV 424 Query: 548 ISYLVIVKEIKRVELK 563 ISY+ IV EIKRVELK Sbjct: 425 ISYIFIVGEIKRVELK 440 >ref|ZP_05636141.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH91487.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 461 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 304/436 (69%), Positives = 359/436 (82%), Gaps = 5/436 (1%) Query: 133 KPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAFSWAYVLAQ 192 KPTH+RYLIL +LF+VTT+NYADRAT++IAGS+++ +L + PVT+GYIFSAF WAYV Q Sbjct: 5 KPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGITPVTLGYIFSAFGWAYVAGQ 64 Query: 193 LPGGWLLDRFGSKKIYMWSIALWSFFTFLQAGVTWMSTGAAVIALFLLRFMVGLAEAPSF 252 +PGGWLLDRFGSKK+Y SI WS FT LQ V A++ALF+LRF+VGLAEAPSF Sbjct: 65 IPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGISTAIVALFMLRFLVGLAEAPSF 124 Query: 253 PANGRIVAAWFPTKERGTASAIFNSAQYFAAVIFTPLMAWIVHTYSWHHVFTVMGVVGIL 312 P N RIVAAWFPT ERGTASAIFNSAQYFA V+F PLM WIV+TY W HVF VMG VGIL Sbjct: 125 PGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAVGIL 184 Query: 313 LAMVWGKIIYSPKDHPRINPAELEHIESGGGLVDMDN-----KKVAAPSTKGKGYIRQLL 367 +M+W K+IY P++HP IN AE EHI S G LVD+D K+ AA S YIRQLL Sbjct: 185 FSMIWMKVIYGPRNHPMINEAEFEHISSNGALVDLDQDKGKGKEKAASSGPKWDYIRQLL 244 Query: 368 SNRMLLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGG 427 +NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CGFIGGV+GG Sbjct: 245 TNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICGFIGGVLGG 304 Query: 428 LISDRLIKSGMSVTWARKIPIVGGMLLSMTMILCNYVDAQWMVVGIMALAFFGKGVGALG 487 +ISD L++ G S+T+ARK PI+GG+LLS +++ CNYVD +W+VVG MALAFFGKGVGALG Sbjct: 305 IISDYLLRKGHSLTFARKAPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFFGKGVGALG 364 Query: 488 WAVVADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFAGALVFVGINALVTV 547 WAV++D +PKQI GLSGGLFN FGN+A ITTPIVIGYI+ TGSF ALVFVG NAL+ V Sbjct: 365 WAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFVGANALLAV 424 Query: 548 ISYLVIVKEIKRVELK 563 ISY+ IV EIKRVELK Sbjct: 425 ISYIFIVGEIKRVELK 440 >ref|ZP_06459609.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06480824.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. 2250] ref|ZP_07006427.1| D-galactarate permease [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFH98110.1| D-galactarate permease [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFW86151.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH04328.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. 0893_23] gb|EGH09539.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH85611.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 461 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 305/436 (69%), Positives = 360/436 (82%), Gaps = 5/436 (1%) Query: 133 KPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAFSWAYVLAQ 192 KPTH+RYLIL +LF+VTT+NYADRAT++IAGS+++ +L + PVT+GYIFSAF WAYV Q Sbjct: 5 KPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGITPVTLGYIFSAFGWAYVAGQ 64 Query: 193 LPGGWLLDRFGSKKIYMWSIALWSFFTFLQAGVTWMSTGAAVIALFLLRFMVGLAEAPSF 252 +PGGWLLDRFGSKK+Y SI WS FT LQ V A++ALF+LRF+VGLAEAPSF Sbjct: 65 IPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGISTAIVALFMLRFLVGLAEAPSF 124 Query: 253 PANGRIVAAWFPTKERGTASAIFNSAQYFAAVIFTPLMAWIVHTYSWHHVFTVMGVVGIL 312 P N RIVAAWFPT ERGTASAIFNSAQYFA V+F PLM WIV+TY W HVF VMG VGIL Sbjct: 125 PGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAVGIL 184 Query: 313 LAMVWGKIIYSPKDHPRINPAELEHIESGGGLVDMD-NKKVAAPSTKGKG----YIRQLL 367 +M+W K+IY P++HP IN AELEHI S G LVD+D +K A T G YIRQLL Sbjct: 185 FSMIWMKVIYGPRNHPMINEAELEHISSNGALVDLDQDKGKGAQKTASSGPKWDYIRQLL 244 Query: 368 SNRMLLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCGFIGGVVGG 427 +NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CGFIGGV+GG Sbjct: 245 TNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICGFIGGVLGG 304 Query: 428 LISDRLIKSGMSVTWARKIPIVGGMLLSMTMILCNYVDAQWMVVGIMALAFFGKGVGALG 487 +ISD L++ G S+T+ARK PI+GG+LLS +++ CNYVD +W+VVG MALAFFGKGVGALG Sbjct: 305 IISDYLLRKGHSLTFARKAPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFFGKGVGALG 364 Query: 488 WAVVADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFAGALVFVGINALVTV 547 WAV++D +PKQI GLSGGLFN FGN+A ITTPIVIGYI+ TGSF ALVFVG NAL+ V Sbjct: 365 WAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFVGANALLAV 424 Query: 548 ISYLVIVKEIKRVELK 563 ISY+ IV EIKRVELK Sbjct: 425 ISYIFIVGEIKRVELK 440