BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3789.p (369 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776541.1| 6-phosphogluconolactonase [Herbaspirillum se... 572 e-161 ref|YP_004750899.1| hypothetical protein CFU_0238 [Collimonas fu... 401 e-109 ref|ZP_02884517.1| 6-phosphogluconolactonase [Burkholderia grami... 327 2e-87 ref|NP_767008.1| hypothetical protein blr0368 [Bradyrhizobium ja... 325 1e-86 ref|YP_002943634.1| 6-phosphogluconolactonase [Variovorax parado... 323 4e-86 >ref|YP_003776541.1| 6-phosphogluconolactonase [Herbaspirillum seropedicae SmR1] gb|ADJ64633.1| 6-phosphogluconolactonase protein [Herbaspirillum seropedicae SmR1] Length = 365 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 310/354 (87%), Positives = 332/354 (93%) Query: 13 ATLIATSALSLAAAHAGAATVAYVSNADSQDIYVLRLNGDGSVNLIDKVDTGSTVMPLAL 72 ATLIATSALSLA +HAGAAT+AYVS+ADSQDIYVLRLN DGSVNLIDKVDTGSTVMPLA+ Sbjct: 12 ATLIATSALSLATSHAGAATIAYVSHADSQDIYVLRLNNDGSVNLIDKVDTGSTVMPLAI 71 Query: 73 SPDHKFLYAALRGQPYSVVSYAIDPASGKLKALSKVPLADNMANIATDRSGRYLLAASYS 132 SPD K+LYA+LR +PY+V SYAIDPASGKLKALSK PLADNMANIATDRSGRYLLAASY Sbjct: 72 SPDRKYLYASLRREPYAVASYAIDPASGKLKALSKAPLADNMANIATDRSGRYLLAASYF 131 Query: 133 GNRISVNAIGTDGIVQAPPLAVIPTGKNAHSVQVSPDNAFVFASNLGSDVILQYRFDPAT 192 GN+ISVNAIG+DG VQ PPLAVIPTGKNAHSVQV P NAFVFASNLGSDVILQYRFDPA+ Sbjct: 132 GNKISVNAIGSDGAVQTPPLAVIPTGKNAHSVQVDPANAFVFASNLGSDVILQYRFDPAS 191 Query: 193 GTVTPNSPPSVATKAGAGPRHFVFSPDQRFVYSTNELDATVNTYAYDRQSGTLTLLASDS 252 G VTPN+PPSVA+KAGAGPRHFVFSPDQRF+Y NELDATV+TYAYDRQ+GTLTLL SDS Sbjct: 192 GAVTPNTPPSVASKAGAGPRHFVFSPDQRFLYCANELDATVSTYAYDRQAGTLTLLGSDS 251 Query: 253 ALPEGFKTSEQLAAADLHLTPDGRFLYATERASNTLSAYRVERASGRLTRIFNIPTETQP 312 ALPEGF++SEQLAAADLHLTPDGRFLYATER SNTL+ YRV+RASG+LTRI NIPTETQP Sbjct: 252 ALPEGFQSSEQLAAADLHLTPDGRFLYATERTSNTLTGYRVDRASGKLTRILNIPTETQP 311 Query: 313 RGFNIDPQGRYLLAVGQKAGLTSYAIDRDSGALTPVFRYTLGRNPNWVEIIDLP 366 R FNIDPQGRYLLAVGQKAGLTSYAID SG LTP+FRYTLGRNPNWVEIIDLP Sbjct: 312 RAFNIDPQGRYLLAVGQKAGLTSYAIDAASGTLTPLFRYTLGRNPNWVEIIDLP 365 >ref|YP_004750899.1| hypothetical protein CFU_0238 [Collimonas fungivorans Ter331] gb|AEK60076.1| hypothetical protein CFU_0238 [Collimonas fungivorans Ter331] Length = 362 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 218/344 (63%), Positives = 267/344 (77%), Gaps = 3/344 (0%) Query: 25 AAHAGAATVAYVSNADSQDIYVLRLN-GDGSVNLIDKVDTGSTVMPLALSPDHKFLYAAL 83 +A A A T+ YVSNADS+DIYV+ L+ DGS +L++KV TG TVMPLA+SPD +FLYA+L Sbjct: 20 SALASAKTMVYVSNADSRDIYVMELSQSDGSASLVEKVATGGTVMPLAVSPDRRFLYASL 79 Query: 84 RGQPYSVVSYAIDPASGKLKALSKVPLADNMANIATDRSGRYLLAASYSGNRISVNAIGT 143 R PYSV S+AID SGKL LS VPLADNMAN+ATD++GR+LLAASY+GN+IS+N I Sbjct: 80 RSLPYSVSSFAIDRQSGKLSLLSTVPLADNMANLATDKTGRFLLAASYTGNKISINPIAD 139 Query: 144 DGIVQAPPLAVIPTGKNAHSVQVSPDNAFVFASNLGSDVILQYRFDPATGTVTPNSPPSV 203 G V A PLAVIPT + AH++ P N ++FAS+LG DVILQYRFD ++G VTPN PP V Sbjct: 140 KGDVGAQPLAVIPTREKAHAIATDPANTYLFASSLGGDVILQYRFDASSGQVTPNVPPYV 199 Query: 204 ATKAGAGPRHFVFSPDQRFVYSTNELDATVNTYAYDRQSGTLTLLASDSALPEGFKTSEQ 263 T+ GAGPRHFVF RFVY TNELD ++NTY YD SG LTL AS S P+ F+ + Sbjct: 200 ETRQGAGPRHFVFDRRARFVYGTNELDGSLNTYRYDAGSGVLTLQASVSLRPKDFQGA-A 258 Query: 264 LAAADLHLTPDGRFLYATERASNTLSAYRVERASGRLTRIFNIPTETQPRGFNIDPQGRY 323 LA ADLHLTPDGRFLYA+ER S+TL+ + V+ +G LT I PTETQPRGFNIDP GRY Sbjct: 259 LAPADLHLTPDGRFLYASERTSSTLTGFAVDPDNGALTLIGTFPTETQPRGFNIDPGGRY 318 Query: 324 LLAVGQKAG-LTSYAIDRDSGALTPVFRYTLGRNPNWVEIIDLP 366 LLAVGQK+ ++SYAID++SGAL + +Y +G NPNW+EI+DLP Sbjct: 319 LLAVGQKSNRMSSYAIDQNSGALRLLHQYDMGANPNWIEIVDLP 362 >ref|ZP_02884517.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M] gb|EDT10055.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M] Length = 365 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 180/366 (49%), Positives = 256/366 (69%), Gaps = 7/366 (1%) Query: 4 TLSSTSSRFATLIATSALSLAAAHAGAATVAYVSNADSQDIYVLRLN-GDGSVNLIDKVD 62 ++S+ S A L+A A+S A A+T AYVSNADSQDI V L+ +G++ ++ V Sbjct: 2 SVSAVSRAVAILLAGVAMS---ATVHASTYAYVSNADSQDISVFSLDKSNGALKPVETVS 58 Query: 63 TGSTVMPLALSPDHKFLYAALRGQPYSVVSYAIDPASGKLKALSKVPLADNMANIATDRS 122 G TVMP+A SP+H LYA LR +P+ VVS+A+ P G+L L K PLA++MA ++TD S Sbjct: 59 VGGTVMPMAFSPNHLRLYAGLRSKPFRVVSFAVSPLDGRLTELGKAPLAESMAYVSTDAS 118 Query: 123 GRYLLAASYSGNRISVNAIGTDGIVQAPPLAVIPTGKNAHSVQVSPDNAFVFASNLGSDV 182 GRYL +ASY GN ++VN IG +G V ++ TG AH+++ +PDN +VFAS LG+D Sbjct: 119 GRYLFSASYGGNLLAVNGIGANG-VAGDVQQIVKTGPMAHAIRNAPDNRYVFASVLGADA 177 Query: 183 ILQYRFDPATGTVTPNSPPSVATKAGAGPRHFVFSPDQRFVYSTNELDATVNTYAYDRQS 242 L+ +FD A G +T ++ P+ + A +GPRHFVFSPD+RFVY +ELD ++ A+D+Q Sbjct: 178 WLRLKFDAANGALTQDAAPAYSLPAKSGPRHFVFSPDERFVYLIDELDGKLHVLAFDKQR 237 Query: 243 GTLTLLASDSALPEGFKTSEQLAAADLHLTPDGRFLYATERASNTLSAYRVERASGRLTR 302 + + + S LP F + ++ AD+H+TPDGRF+YA+ER S+TL+AYRV+RASG+LTR Sbjct: 238 DAVKPVQTVSILPPNF-SGDKPWGADVHITPDGRFVYASERTSSTLAAYRVDRASGKLTR 296 Query: 303 IFNIPTETQPRGFNIDPQGRYLLAVGQ-KAGLTSYAIDRDSGALTPVFRYTLGRNPNWVE 361 I PTE QPRGFNIDP G YLLAVGQ L++Y I+R++GAL+ + +Y +G+ NW+E Sbjct: 297 IGTYPTEKQPRGFNIDPSGNYLLAVGQLSTNLSAYRINRETGALSALGQYPVGKGANWIE 356 Query: 362 IIDLPG 367 I++ G Sbjct: 357 IVEFNG 362 >ref|NP_767008.1| hypothetical protein blr0368 [Bradyrhizobium japonicum USDA 110] dbj|BAC45633.1| blr0368 [Bradyrhizobium japonicum USDA 110] Length = 398 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 180/373 (48%), Positives = 249/373 (66%), Gaps = 11/373 (2%) Query: 2 SKTLSSTSSR--FATLIATSALSLAAAHAGAATVAYVSNADSQDIYVLRLNGDGSVNLID 59 ++ ++S + R AT +A AL A T AYV NADS DI V +L+ G + + Sbjct: 29 TRCVASKTPRAAIATTLAFLALISGVRAGMAETFAYVGNADSNDISVFKLSESGEMTPVQ 88 Query: 60 K-----VDTGSTVMPLALSPDHKFLYAALRGQPYSVVSYAIDPASGKLKALSKVPLADNM 114 V+ + PLA++PDH+ L A +R QP+ VS+AIDP +G+L + PLAD+M Sbjct: 89 TAAFTGVEKPGSSTPLAITPDHRVLIAGVRSQPFQAVSFAIDPKTGQLSHVGNGPLADSM 148 Query: 115 ANIATDRSGRYLLAASYSGNRISVNAIGTDGIVQAPPLAVIPTGKNAHSVQVSPDNAFVF 174 ANIATDR G+ L +ASY GN++++N + +G+V P VIPTG NAH+ SPDN +VF Sbjct: 149 ANIATDRGGKVLFSASYGGNKVALNPLSANGVV-GEPKQVIPTGLNAHAFLPSPDNRYVF 207 Query: 175 ASNLGSDVILQYRFDPATGTVTPNSPPSVATKAGAGPRHFVFSPDQRFVYSTNELDATVN 234 A+NLGSD +L + FD TGT+TP++PP+ +GPRHFVF P+ +FVY +EL+ V Sbjct: 208 ATNLGSDQVLSFAFDVTTGTLTPSAPPNYKVPEKSGPRHFVFHPNGKFVYLIHELNGDVA 267 Query: 235 TYAYDRQSGTLTLLASDSALPEGFKTSEQLAAADLHLTPDGRFLYATERASNTLSAYRVE 294 + Y+ +SG + +ALPEGF AAD+H+TPDGRFLYA+ER +NTL+AY+V+ Sbjct: 268 AFTYEAKSGAWDEIQRTTALPEGFNGKPW--AADIHITPDGRFLYASERTTNTLTAYKVD 325 Query: 295 RASGRLTRIFNIPTETQPRGFNIDPQGRYLLAVGQKA-GLTSYAIDRDSGALTPVFRYTL 353 ASG+LT + ++PTE QPRGFNIDP RYL AVG+ + G+T YAID+ SGAL+ + Y Sbjct: 326 AASGKLTTVGSVPTEKQPRGFNIDPSSRYLAAVGELSDGMTVYAIDQSSGALSKLKSYPT 385 Query: 354 GRNPNWVEIIDLP 366 G+ PNWVE + LP Sbjct: 386 GKKPNWVEFLSLP 398 >ref|YP_002943634.1| 6-phosphogluconolactonase [Variovorax paradoxus S110] gb|ACS18368.1| 6-phosphogluconolactonase [Variovorax paradoxus S110] Length = 363 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 184/353 (52%), Positives = 241/353 (68%), Gaps = 6/353 (1%) Query: 17 ATSALSLAA-AHAGAATVAYVSNADSQDIYVLRLN-GDGSVNLIDKVDTGSTVMPLALSP 74 A + LS+AA A AAT YVSNADSQ+I VL L+ +G + + ++ G TVMP+A+SP Sbjct: 14 AVALLSVAAMGQAWAATWVYVSNADSQEISVLELDRAEGVLKPVQTLNVGGTVMPMAVSP 73 Query: 75 DHKFLYAALRGQPYSVVSYAIDPASGKLKALSKVPLADNMANIATDRSGRYLLAASYSGN 134 D + LYAALR QP+ VVS +ID A+GKL+ L + PLAD+MANI D SG++L AASY G Sbjct: 74 DKRVLYAALRSQPFRVVSMSIDAATGKLQKLGEAPLADSMANIDLDASGKWLFAASYQGG 133 Query: 135 RISVNAIGTDGIVQAPPLAVIPTGKNAHSVQVSPDNAFVFASNLGSDVILQYRFDPATGT 194 +ISVNAIG DG V P ++ TG NAH+V +N FV A++LG D + +RFD G Sbjct: 134 KISVNAIGKDGAV-GPIQQLVQTGPNAHAVHADANNRFVLATSLGGDNVSSWRFDADKGL 192 Query: 195 VTPNSPPSVATKAGAGPRHFVFSPDQRFVYSTNELDATVNTYAYDRQSGTLTLLASDSAL 254 + N PP + A +GPRHFV+ QR VY NELDA+++ YA+D G L L S + L Sbjct: 193 LAANDPPLTMSTAKSGPRHFVWDKAQRHVYLLNELDASLHVYAWDAARGALKLEQSTTTL 252 Query: 255 PEGFKTSEQLAAADLHLTPDGRFLYATERASNTLSAYRVERASGRLTRIFNIPTETQPRG 314 P GF + + AADLHLTPDGR+LYA+ER S+TLSA++V+ ASG+L + PTE PRG Sbjct: 253 PPGF--TGKPWAADLHLTPDGRYLYASERTSSTLSAFKVDAASGQLQPLGQTPTEKGPRG 310 Query: 315 FNIDPQGRYLLAVGQKA-GLTSYAIDRDSGALTPVFRYTLGRNPNWVEIIDLP 366 F ID GRYL+A GQ++ G++ Y ID +GAL R T G+NPNW+EI+D P Sbjct: 311 FAIDSSGRYLIAAGQESHGISLYPIDSATGALGKPSRITAGKNPNWIEIVDAP 363