BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3783.p (203 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776537.1| transcription regulator protein [Herbaspiril... 318 2e-85 ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimon... 272 2e-71 ref|YP_001100496.1| repressor of the iscRSUA operon, involved in... 256 2e-66 ref|YP_001352941.1| iron-sulfur cluster assembly transcription f... 256 2e-66 ref|YP_004029638.1| Rrf2 family protein [Burkholderia rhizoxinic... 239 2e-61 >ref|YP_003776537.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64629.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 161/164 (98%), Positives = 163/164 (99%) Query: 40 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 99 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 Query: 100 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSAAHPGGARCMTHELWSTLNE 159 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSA+HPGGARCMTH+LWSTLNE Sbjct: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 Query: 160 KMVEYLDSVSLQDLVDQQKEPKAAEHRAADSQSVVVMHRPQAAA 203 KMVEYLDSVSLQDLVDQQKEPK AEHRAADSQSVVVMHRPQAAA Sbjct: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 >ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] gb|AEK62956.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] Length = 164 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 140/164 (85%), Positives = 147/164 (89%) Query: 40 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 99 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 Query: 100 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSAAHPGGARCMTHELWSTLNE 159 PGGGYNLARKA DV+VADIIIAVDEPLDATQCGGKENCHS H GG+RCMTH+LWSTLN Sbjct: 61 PGGGYNLARKAEDVTVADIIIAVDEPLDATQCGGKENCHSPDHEGGSRCMTHDLWSTLNA 120 Query: 160 KMVEYLDSVSLQDLVDQQKEPKAAEHRAADSQSVVVMHRPQAAA 203 KMVEYLDSVSL+DLVDQQ + A+ R A Q+VVVMHR A Sbjct: 121 KMVEYLDSVSLKDLVDQQHAQQQAQQRKALEQNVVVMHRSHLVA 164 >ref|YP_001100496.1| repressor of the iscRSUA operon, involved in assembly of Fe-S clusters [Herminiimonas arsenicoxydans] emb|CAL62374.1| Iron-sulfur cluster assembly transcription factor IscR [Herminiimonas arsenicoxydans] Length = 157 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 130/163 (79%), Positives = 142/163 (87%), Gaps = 7/163 (4%) Query: 40 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 99 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 100 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSAAHPGGARCMTHELWSTLNE 159 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTH+LW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 160 KMVEYLDSVSLQDLVDQQKEPKAAEHRAADSQSVVVMHRPQAA 202 KMV+YLDSVSL+DLVDQQK+ K +E Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQ-KVSE------QCVVVVHRNHAA 156 >ref|YP_001352941.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] gb|ABR90077.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] Length = 157 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 130/163 (79%), Positives = 142/163 (87%), Gaps = 7/163 (4%) Query: 40 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 99 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 100 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSAAHPGGARCMTHELWSTLNE 159 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTH+LW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 160 KMVEYLDSVSLQDLVDQQKEPKAAEHRAADSQSVVVMHRPQAA 202 KMV+YLDSVSL+DLVDQQK+ K +E Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQ-KISE------QCVVVVHRNHAA 156 >ref|YP_004029638.1| Rrf2 family protein [Burkholderia rhizoxinica HKI 454] emb|CBW75494.1| Rrf2 family protein [Burkholderia rhizoxinica HKI 454] Length = 180 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 119/139 (85%), Positives = 128/139 (92%), Gaps = 1/139 (0%) Query: 40 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 99 MRLTTKGRFAVTAMIDLALRQ KGPVTL+AIS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 5 MRLTTKGRFAVTAMIDLALRQEKGPVTLAAISQRQQISLSYLEQLFGKLRRHEIVESVRG 64 Query: 100 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSAAHPGGARCMTHELWSTLNE 159 PGGGYNLAR+A +V+VADIIIAVDEPLDATQCGGK C PGG CMTHELWSTLN+ Sbjct: 65 PGGGYNLARRADEVTVADIIIAVDEPLDATQCGGKGTCEGTKQPGG-HCMTHELWSTLNQ 123 Query: 160 KMVEYLDSVSLQDLVDQQK 178 KMVEYLDSVSLQDLVDQQ+ Sbjct: 124 KMVEYLDSVSLQDLVDQQR 142