BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3780.p         (107 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776534.1| hypothetical protein Hsero_3142 [Herbaspiril...   214   3e-54
ref|YP_001100493.1| factor involved in Fe-S cluster assembly and...   205   2e-51
ref|YP_001352944.1| [Fe-S] cluster formation/repair protein [Jan...   203   7e-51
ref|YP_004753776.1| Iron binding protein IscA for iron-sulfur cl...   201   4e-50
ref|ZP_08273679.1| Iron binding protein IscA for iron-sulfur clu...   201   5e-50

>ref|YP_003776534.1| hypothetical protein Hsero_3142 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64626.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 107

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60
           MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV
Sbjct: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60

Query: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107
           RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI
Sbjct: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107


>ref|YP_001100493.1| factor involved in Fe-S cluster assembly and activation
           [Herminiimonas arsenicoxydans]
 emb|CAL62371.1| Iron-binding protein iscA (Iron-sulfur cluster assembly protein)
           [Herminiimonas arsenicoxydans]
          Length = 107

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/107 (93%), Positives = 104/107 (97%)

Query: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60
           MAITLTEKAAKHI+RYMERRGKGIGLR GVRTTGCSGLAYKLEYVDE +SED+VFESHGV
Sbjct: 1   MAITLTEKAAKHINRYMERRGKGIGLRFGVRTTGCSGLAYKLEYVDESASEDSVFESHGV 60

Query: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107
           +VFVDPKSLPYIDGTELDFAREGLNEGFKF NPNVKDECGCGESFRI
Sbjct: 61  KVFVDPKSLPYIDGTELDFAREGLNEGFKFHNPNVKDECGCGESFRI 107


>ref|YP_001352944.1| [Fe-S] cluster formation/repair protein [Janthinobacterium sp.
           Marseille]
 gb|ABR90089.1| [Fe-S] cluster formation/repair protein [Janthinobacterium sp.
           Marseille]
          Length = 107

 Score =  203 bits (516), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 98/107 (91%), Positives = 105/107 (98%)

Query: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60
           MAITLTEKAAKHI+RYMERRGKGIGLR GVRTTGCSGLAYKLEYVDE ++ED+VFESHG+
Sbjct: 1   MAITLTEKAAKHITRYMERRGKGIGLRFGVRTTGCSGLAYKLEYVDESANEDSVFESHGI 60

Query: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107
           +VFVDPKSLPYIDGTELDFAREGLNEGFKF+NPNVKDECGCGESFRI
Sbjct: 61  KVFVDPKSLPYIDGTELDFAREGLNEGFKFRNPNVKDECGCGESFRI 107


>ref|YP_004753776.1| Iron binding protein IscA for iron-sulfur cluster assembly
           [Collimonas fungivorans Ter331]
 gb|AEK62953.1| Iron binding protein IscA for iron-sulfur cluster assembly
           [Collimonas fungivorans Ter331]
          Length = 107

 Score =  201 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 97/107 (90%), Positives = 103/107 (96%)

Query: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60
           MAITLTEKAAKHI+RY+ERRGKGIGLR GVRTTGCSGLAYKLEYVDE++ ED VFESHG+
Sbjct: 1   MAITLTEKAAKHINRYIERRGKGIGLRFGVRTTGCSGLAYKLEYVDEKTDEDAVFESHGI 60

Query: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107
           +VFVDPKSLPYIDGTELDFAREGLNEGFKF NPNVKDECGCGESFRI
Sbjct: 61  QVFVDPKSLPYIDGTELDFAREGLNEGFKFYNPNVKDECGCGESFRI 107


>ref|ZP_08273679.1| Iron binding protein IscA for iron-sulfur cluster assembly
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32851.1| Iron binding protein IscA for iron-sulfur cluster assembly
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 107

 Score =  201 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 97/107 (90%), Positives = 103/107 (96%)

Query: 1   MAITLTEKAAKHISRYMERRGKGIGLRLGVRTTGCSGLAYKLEYVDEQSSEDTVFESHGV 60
           MAITLTEKAAKHISRYMERRGKGIGLR GVRTTGCSGLAYKLEYVDE ++ED++FESHGV
Sbjct: 1   MAITLTEKAAKHISRYMERRGKGIGLRFGVRTTGCSGLAYKLEYVDESATEDSMFESHGV 60

Query: 61  RVFVDPKSLPYIDGTELDFAREGLNEGFKFQNPNVKDECGCGESFRI 107
           ++FVDPKSLPYIDGTELDFAREGLNEGFKF NPNVKD CGCGESFRI
Sbjct: 61  KLFVDPKSLPYIDGTELDFAREGLNEGFKFYNPNVKDACGCGESFRI 107