BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3778.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776532.1| threonine efflux protein [Herbaspirillum ser... 310 9e-83 ref|YP_004753774.1| threonine efflux protein [Collimonas fungivo... 237 6e-61 ref|YP_294590.1| lysine exporter protein LysE/YggA [Ralstonia eu... 186 2e-45 ref|YP_004684258.1| threonine efflux protein [Cupriavidus necato... 185 4e-45 ref|YP_724914.1| putative threonine efflux protein [Ralstonia eu... 184 8e-45 >ref|YP_003776532.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ64624.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 310 bits (794), Expect = 9e-83, Method: Composition-based stats. Identities = 198/208 (95%), Positives = 205/208 (98%) Query: 1 MPDLFLFLLAAMTLTLAPGPDNIYVLTRGIAQGRKAGLVAAAGFCSGLIFHTLLAVLGFA 60 MPDL LFLLAAMTLTLAPGPDN+YVLTRGIAQGRKAGLVAAAGFCSGL+FHTLLAVLGFA Sbjct: 1 MPDLILFLLAAMTLTLAPGPDNLYVLTRGIAQGRKAGLVAAAGFCSGLVFHTLLAVLGFA 60 Query: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASSGIALSADGQGAAAVPLRRIYWQSVLA 120 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSAS+G+AL+ADGQGAAAVPLRRIYWQSVLA Sbjct: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASAGLALAADGQGAAAVPLRRIYWQSVLA 120 Query: 121 NMLNPKVTLFFIAFLPQFVQREAGYEALQMLILALVFIVQAFVIFSAIALFSGAVGAVFR 180 NMLNPKVTLFFIAFLPQFVQREAG+EALQML+LALVFIVQAF IFSAIALFSGAVGA FR Sbjct: 121 NMLNPKVTLFFIAFLPQFVQREAGHEALQMLVLALVFIVQAFAIFSAIALFSGAVGAYFR 180 Query: 181 RRASASVHLNRLAGCAFIGLGIRMALPE 208 RRASASVHLNRLAGCAFIGLGIRMALPE Sbjct: 181 RRASASVHLNRLAGCAFIGLGIRMALPE 208 >ref|YP_004753774.1| threonine efflux protein [Collimonas fungivorans Ter331] gb|AEK62951.1| Threonine efflux protein [Collimonas fungivorans Ter331] Length = 204 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 151/208 (72%), Positives = 171/208 (82%), Gaps = 4/208 (1%) Query: 1 MPDLFLFLLAAMTLTLAPGPDNIYVLTRGIAQGRKAGLVAAAGFCSGLIFHTLLAVLGFA 60 MP+++LFL+AAMTLTLAPGPDNIYVLTRGI QGRKAGLVAAAGF SGLIFHT+LAVLGFA Sbjct: 1 MPEIWLFLIAAMTLTLAPGPDNIYVLTRGITQGRKAGLVAAAGFSSGLIFHTMLAVLGFA 60 Query: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASSGIALSADGQGAAAVPLRRIYWQSVLA 120 ALIKA P AY L+YAGAAYL Y+GVRTLRS S+ I L + A + L RIYWQSV+A Sbjct: 61 ALIKASPLAYSLLRYAGAAYLIYIGVRTLRSHSA-IQLQGN---AEPMKLSRIYWQSVIA 116 Query: 121 NMLNPKVTLFFIAFLPQFVQREAGYEALQMLILALVFIVQAFVIFSAIALFSGAVGAVFR 180 NMLNPKVTLFFIAFLPQFV AG+ QML+LA VFIVQA I S +ALFSG VGA F+ Sbjct: 117 NMLNPKVTLFFIAFLPQFVNESAGHIPAQMLLLAAVFIVQALAILSVVALFSGMVGAFFQ 176 Query: 181 RRASASVHLNRLAGCAFIGLGIRMALPE 208 R+ SA+ +NRLAG AFI LGIR+ALP+ Sbjct: 177 RKKSAATIMNRLAGSAFIALGIRIALPQ 204 >ref|YP_294590.1| lysine exporter protein LysE/YggA [Ralstonia eutropha JMP134] gb|AAZ59746.1| Lysine exporter protein (LYSE/YGGA) [Ralstonia eutropha JMP134] Length = 203 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 110/207 (53%), Positives = 154/207 (74%), Gaps = 4/207 (1%) Query: 1 MPDLFLFLLAAMTLTLAPGPDNIYVLTRGIAQGRKAGLVAAAGFCSGLIFHTLLAVLGFA 60 MPDL LFL+ ++ +TLAPGPDN+ VL RG+AQGR+AG+VAA GF G +FHT++A +G A Sbjct: 1 MPDLLLFLVTSIAITLAPGPDNLQVLARGMAQGRRAGVVAALGFAVGCLFHTMIAAVGLA 60 Query: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASSGIALSADGQGAAAVPLRRIYWQSVLA 120 A++++ P A+ ++YAGAAYL ++G++ LR A G+A AD AAVPL +++ QSVL Sbjct: 61 AVLRSSPLAFQLIKYAGAAYLIWIGIQALR-AKGGLAQGAD---VAAVPLGKVFRQSVLG 116 Query: 121 NMLNPKVTLFFIAFLPQFVQREAGYEALQMLILALVFIVQAFVIFSAIALFSGAVGAVFR 180 NM+NPKVTLFF+ FLPQFV +A + ALQ ++L LVF++Q V+FS L +G +GA R Sbjct: 117 NMMNPKVTLFFLVFLPQFVHADATHPALQFVLLGLVFMLQTAVVFSLFGLCAGWLGAWLR 176 Query: 181 RRASASVHLNRLAGCAFIGLGIRMALP 207 +R + L+R AG F+GLGI++ALP Sbjct: 177 KRPTTGRWLDRAAGAIFVGLGIKVALP 203 >ref|YP_004684258.1| threonine efflux protein [Cupriavidus necator N-1] gb|AEI75777.1| threonine efflux protein [Cupriavidus necator N-1] Length = 203 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 109/207 (52%), Positives = 152/207 (73%), Gaps = 4/207 (1%) Query: 1 MPDLFLFLLAAMTLTLAPGPDNIYVLTRGIAQGRKAGLVAAAGFCSGLIFHTLLAVLGFA 60 MPDL LFLL ++ +T+APGPDN+ VL RG+AQGR+AGLVAA GF G +FHT++A +G A Sbjct: 1 MPDLLLFLLTSIAVTVAPGPDNLQVLARGMAQGRRAGLVAALGFSVGCLFHTVIAAVGLA 60 Query: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASSGIALSADGQGAAAVPLRRIYWQSVLA 120 A++++ P A+ ++YAGAAYL ++G++ LR A G+A D AVPL R++ QSVL Sbjct: 61 AVLRSSPLAFQLIKYAGAAYLIWIGIQALR-AKGGLAQGGD---VDAVPLGRVFRQSVLG 116 Query: 121 NMLNPKVTLFFIAFLPQFVQREAGYEALQMLILALVFIVQAFVIFSAIALFSGAVGAVFR 180 N++NPKVTLFF+ FLPQFV+ +A + LQ L+L +VF++Q V+FS L +G +GA R Sbjct: 117 NIMNPKVTLFFLVFLPQFVRADATHPGLQFLLLGVVFMLQTAVVFSLFGLCAGWLGAWLR 176 Query: 181 RRASASVHLNRLAGCAFIGLGIRMALP 207 RR + L+R AG F+GLGI++ALP Sbjct: 177 RRPATGRWLDRAAGAIFVGLGIKVALP 203 >ref|YP_724914.1| putative threonine efflux protein [Ralstonia eutropha H16] emb|CAJ91546.1| putative threonine efflux protein [Ralstonia eutropha H16] Length = 203 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 109/207 (52%), Positives = 152/207 (73%), Gaps = 4/207 (1%) Query: 1 MPDLFLFLLAAMTLTLAPGPDNIYVLTRGIAQGRKAGLVAAAGFCSGLIFHTLLAVLGFA 60 MPDL LFLL ++ +T+APGPDN+ VL RG+AQGR+AGLVAA GF G +FHT++A +G A Sbjct: 1 MPDLLLFLLTSIAVTVAPGPDNLQVLARGMAQGRRAGLVAALGFSVGCLFHTVIAAVGLA 60 Query: 61 ALIKAYPPAYHALQYAGAAYLAYLGVRTLRSASSGIALSADGQGAAAVPLRRIYWQSVLA 120 A++++ P A+ ++YAGAAYL ++G++ LR A G+A D AVPL R++ QSVL Sbjct: 61 AVLRSSPLAFQLIKYAGAAYLIWIGIQALR-AKGGLAQGGD---VDAVPLARVFRQSVLG 116 Query: 121 NMLNPKVTLFFIAFLPQFVQREAGYEALQMLILALVFIVQAFVIFSAIALFSGAVGAVFR 180 N++NPKVTLFF+ FLPQFV+ +A + LQ L+L +VF++Q V+FS L +G +GA R Sbjct: 117 NIMNPKVTLFFLVFLPQFVRADAAHPGLQFLLLGVVFMLQTAVVFSLFGLCAGWLGAWLR 176 Query: 181 RRASASVHLNRLAGCAFIGLGIRMALP 207 RR + L+R AG F+GLGI++ALP Sbjct: 177 RRPATGRWLDRAAGAIFVGLGIKVALP 203