BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3759.p (432 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776511.1| methylcitrate synthase [Herbaspirillum serop... 785 0.0 ref|YP_001355178.1| methylcitrate synthase [Janthinobacterium sp... 743 0.0 ref|YP_004754180.1| 2-methylcitrate synthase [Collimonas fungivo... 742 0.0 ref|YP_296535.1| methylcitrate synthase [Ralstonia eutropha JMP1... 720 0.0 ref|ZP_08274240.1| 2-methylcitrate synthase [Oxalobacteraceae ba... 717 0.0 >ref|YP_003776511.1| methylcitrate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64603.1| methylcitrate synthase (Citrate synthase 2) protein [Herbaspirillum seropedicae SmR1] Length = 384 Score = 785 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 380/384 (98%), Positives = 383/384 (99%) Query: 49 MSDQQAPGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAHLL 108 MS+QQA GFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAHLL Sbjct: 1 MSEQQAAGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAHLL 60 Query: 109 VHGKLPTAAELRAYKAKLKALRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPEKD 168 VHGKLPTAAELRAYKAKLK+LRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPEKD Sbjct: 61 VHGKLPTAAELRAYKAKLKSLRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPEKD 120 Query: 169 DHNTPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPSDA 228 DHNTPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPS+A Sbjct: 121 DHNTPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPSEA 180 Query: 229 WEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEI 288 WEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEI Sbjct: 181 WEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEI 240 Query: 289 QKRYDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKMFD 348 QKRYDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKMFD Sbjct: 241 QKRYDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKMFD 300 Query: 349 IAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDN 408 IAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDN Sbjct: 301 IAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDN 360 Query: 409 KIIRPSANYVGPEDLKFVPISKRK 432 KIIRPSANYVGPEDLKFVPISKRK Sbjct: 361 KIIRPSANYVGPEDLKFVPISKRK 384 >ref|YP_001355178.1| methylcitrate synthase [Janthinobacterium sp. Marseille] gb|ABR88900.1| 2-methylcitrate synthase [Janthinobacterium sp. Marseille] Length = 387 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 360/387 (93%), Positives = 372/387 (96%), Gaps = 3/387 (0%) Query: 49 MSDQQAP---GFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIA 105 MS+ QA GFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILD+ADSCEFEEIA Sbjct: 1 MSESQATPATGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDIADSCEFEEIA 60 Query: 106 HLLVHGKLPTAAELRAYKAKLKALRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLP 165 HLLVHGKLPTAAEL+AYK KLK LRGLPANVKAALEWLPAASHPMDVMRTGVSALGCV+P Sbjct: 61 HLLVHGKLPTAAELKAYKIKLKELRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVIP 120 Query: 166 EKDDHNTPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKP 225 EKDDHN PGARDIADRLMASLGS+LLYWYHYSHNG RIEVETDDDSIGAHFLHLLHGEKP Sbjct: 121 EKDDHNAPGARDIADRLMASLGSILLYWYHYSHNGKRIEVETDDDSIGAHFLHLLHGEKP 180 Query: 226 SDAWEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVA 285 S WEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANE A Sbjct: 181 SALWEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEFA 240 Query: 286 FEIQKRYDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTK 345 FEIQKRY++PDEAEADI+RRVENKEVVIGFGHPVYTISDPRNKVIKEVAR LS+EAGS K Sbjct: 241 FEIQKRYESPDEAEADIKRRVENKEVVIGFGHPVYTISDPRNKVIKEVARTLSEEAGSLK 300 Query: 346 MFDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQR 405 MFDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQR Sbjct: 301 MFDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQR 360 Query: 406 IDNKIIRPSANYVGPEDLKFVPISKRK 432 IDNKIIRPSA+YVGPEDL FVP++KRK Sbjct: 361 IDNKIIRPSAHYVGPEDLAFVPLAKRK 387 >ref|YP_004754180.1| 2-methylcitrate synthase [Collimonas fungivorans Ter331] gb|AEK63357.1| 2-methylcitrate synthase [Collimonas fungivorans Ter331] Length = 386 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 358/386 (92%), Positives = 370/386 (95%), Gaps = 2/386 (0%) Query: 49 MSDQQ--APGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAH 106 MS+QQ A FKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILD+ADSCEFEEIAH Sbjct: 1 MSEQQPAATPFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDIADSCEFEEIAH 60 Query: 107 LLVHGKLPTAAELRAYKAKLKALRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPE 166 LLVHGKLPT+AEL+AYK KLKALRGLPANVKAALEWLPAASHPMDVMRTG SALGC+LPE Sbjct: 61 LLVHGKLPTSAELKAYKTKLKALRGLPANVKAALEWLPAASHPMDVMRTGASALGCILPE 120 Query: 167 KDDHNTPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPS 226 KDDHN PGARDIADRLMASLGS+LLYWYHYSHNG RI+VETDD+SIG HFLHLLHGEKPS Sbjct: 121 KDDHNAPGARDIADRLMASLGSVLLYWYHYSHNGKRIDVETDDESIGGHFLHLLHGEKPS 180 Query: 227 DAWEKAMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAF 286 WEKAMHTSLILYAEHEFNASTF GRVIAGTGSDMYSAITGAIGALRGPKHGGANE AF Sbjct: 181 ALWEKAMHTSLILYAEHEFNASTFAGRVIAGTGSDMYSAITGAIGALRGPKHGGANEFAF 240 Query: 287 EIQKRYDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKM 346 EIQKRYDNPDEAEADI++RVENKEVVIGFGHPVYTISDPRNKVIKEVAR LS++AGS KM Sbjct: 241 EIQKRYDNPDEAEADIKKRVENKEVVIGFGHPVYTISDPRNKVIKEVARSLSRDAGSLKM 300 Query: 347 FDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRI 406 FDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRI Sbjct: 301 FDIAERLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRI 360 Query: 407 DNKIIRPSANYVGPEDLKFVPISKRK 432 DNKIIRPSANYVGPEDLKFVPI KRK Sbjct: 361 DNKIIRPSANYVGPEDLKFVPIGKRK 386 >ref|YP_296535.1| methylcitrate synthase [Ralstonia eutropha JMP134] gb|AAZ61691.1| 2-methylcitrate synthase [Ralstonia eutropha JMP134] Length = 393 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 347/380 (91%), Positives = 361/380 (95%) Query: 53 QAPGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAHLLVHGK 112 Q+ G KPKKSVALSGVTAGNTALCTVG+TGNDLHYRGYDILDVAD+CEFEEIAHLLVHGK Sbjct: 14 QSAGPKPKKSVALSGVTAGNTALCTVGRTGNDLHYRGYDILDVADACEFEEIAHLLVHGK 73 Query: 113 LPTAAELRAYKAKLKALRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPEKDDHNT 172 LP AEL AYK KLK+LRGLPANVKAALEW+PA++HPMDVMRTGVS LG VLPEKDDHN Sbjct: 74 LPNRAELAAYKTKLKSLRGLPANVKAALEWVPASAHPMDVMRTGVSVLGTVLPEKDDHNA 133 Query: 173 PGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPSDAWEKA 232 PGARDIADRLMASLGSMLLYWYHYSHNG RIEVETDDDSIGAHFLHLLHGEKPS WE+A Sbjct: 134 PGARDIADRLMASLGSMLLYWYHYSHNGRRIEVETDDDSIGAHFLHLLHGEKPSKLWERA 193 Query: 233 MHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEIQKRY 292 MHTS+ILYAEHEFNASTFTGRVIAGTGSDMYSAI GAIGALRGPKHGGANEVAFEIQKRY Sbjct: 194 MHTSMILYAEHEFNASTFTGRVIAGTGSDMYSAICGAIGALRGPKHGGANEVAFEIQKRY 253 Query: 293 DNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKMFDIAER 352 D+PDEA+ADI RRVENKEVVIGFGHPVYTI+DPRN+VIKE AR LSK+AGS KMFDIAER Sbjct: 254 DSPDEAQADIARRVENKEVVIGFGHPVYTIADPRNQVIKETARNLSKDAGSMKMFDIAER 313 Query: 353 LETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKIIR 412 LETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKIIR Sbjct: 314 LETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKIIR 373 Query: 413 PSANYVGPEDLKFVPISKRK 432 PSANY GPEDLKFVPI KRK Sbjct: 374 PSANYTGPEDLKFVPIGKRK 393 >ref|ZP_08274240.1| 2-methylcitrate synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32288.1| 2-methylcitrate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 717 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 340/381 (89%), Positives = 362/381 (95%) Query: 52 QQAPGFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDVADSCEFEEIAHLLVHG 111 + P FKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILD+AD+CEFEEIAHLLVHG Sbjct: 3 ESVPAFKPKKSVALSGVTAGNTALCTVGKTGNDLHYRGYDILDIADTCEFEEIAHLLVHG 62 Query: 112 KLPTAAELRAYKAKLKALRGLPANVKAALEWLPAASHPMDVMRTGVSALGCVLPEKDDHN 171 KLPT+AEL AYK KLKALRGLPANVK LE LPA+SHPMDVMRTGVSA+GC+LPEKDDHN Sbjct: 63 KLPTSAELHAYKTKLKALRGLPANVKLVLEALPASSHPMDVMRTGVSAMGCILPEKDDHN 122 Query: 172 TPGARDIADRLMASLGSMLLYWYHYSHNGNRIEVETDDDSIGAHFLHLLHGEKPSDAWEK 231 TPGARDIADRLMASLGSMLLYWYHYS NG RIE +T+D+SIGAHFLHLL+G+KPS+AWEK Sbjct: 123 TPGARDIADRLMASLGSMLLYWYHYSSNGKRIETQTEDESIGAHFLHLLNGKKPSEAWEK 182 Query: 232 AMHTSLILYAEHEFNASTFTGRVIAGTGSDMYSAITGAIGALRGPKHGGANEVAFEIQKR 291 AMHTSLILYAEHEFNASTF RV+AGTGSDM+SAITG IGALRGPKHGGANEVAFEIQKR Sbjct: 183 AMHTSLILYAEHEFNASTFAARVVAGTGSDMFSAITGGIGALRGPKHGGANEVAFEIQKR 242 Query: 292 YDNPDEAEADIRRRVENKEVVIGFGHPVYTISDPRNKVIKEVARKLSKEAGSTKMFDIAE 351 YDNPDEAEADIRRRV+NKEVVIGFGHPVYT+SDPRNKVIK+VAR LS E GSTKMFDIAE Sbjct: 243 YDNPDEAEADIRRRVDNKEVVIGFGHPVYTVSDPRNKVIKDVARSLSIEEGSTKMFDIAE 302 Query: 352 RLETVMWDIKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKII 411 RLETVMW+ K+MFPNLDWFSAVSYHMMG+PTAMFTPLFVIARTSGWAAHIIEQRIDNKII Sbjct: 303 RLETVMWEAKRMFPNLDWFSAVSYHMMGIPTAMFTPLFVIARTSGWAAHIIEQRIDNKII 362 Query: 412 RPSANYVGPEDLKFVPISKRK 432 RPSANYVGP+DL FVPISKRK Sbjct: 363 RPSANYVGPDDLAFVPISKRK 383