BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3753.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspiri... 509 e-142 ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium ... 424 e-117 emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas... 424 e-117 ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formige... 413 e-113 ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae ba... 408 e-112 >ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 252/255 (98%), Positives = 253/255 (99%) Query: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK Sbjct: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 Query: 61 TYNGVAILSRHPMTDVVKNNPLFPDEQQRIIAATIEGVRTVCAYIPNGQSLESEKYPYKL 120 TYNGVAILSRHPM DVVKNNPLFPDEQQRIIAATIEGVR VCAYIPNGQSLESEKYPYKL Sbjct: 61 TYNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEGVRYVCAYIPNGQSLESEKYPYKL 120 Query: 121 SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 +WLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA Sbjct: 121 NWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 Query: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW Sbjct: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 Query: 241 EQPSDHAPVIATLAD 255 EQPSDHAPVIATLAD Sbjct: 241 EQPSDHAPVIATLAD 255 >ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 254 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 201/253 (79%), Positives = 221/253 (87%) Query: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 MKIATWNVNSLKVRLPQVL+WL +NPVDVLCLQETK ++KFP AEI AAGY V ++GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLQWLTDNPVDVLCLQETKTVNEKFPLAEIEAAGYHVVYTGQK 60 Query: 61 TYNGVAILSRHPMTDVVKNNPLFPDEQQRIIAATIEGVRTVCAYIPNGQSLESEKYPYKL 120 TYNGVAILSRHP+ DVVKNNPLF DE QRII TI+GVR +CAYIPNGQSLES+KY YKL Sbjct: 61 TYNGVAILSRHPIDDVVKNNPLFDDEHQRIIIGTIQGVRIICAYIPNGQSLESDKYQYKL 120 Query: 121 SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 WLA LHE LA E ++ +ALLGDYNIAPEDRDVHDPVAWQGQVLVSEPER AF ++Q Sbjct: 121 RWLAGLHELLAHELKQHENVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAFVRMQE 180 Query: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 +G TD++R+FEQ EK+YSWWDYRQMGFRLNRGLRIDHILLS L RCTACVIDKVPRKW Sbjct: 181 MGFTDAFRMFEQAEKLYSWWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVIDKVPRKW 240 Query: 241 EQPSDHAPVIATL 253 EQPSDH PVIATL Sbjct: 241 EQPSDHTPVIATL 253 >emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 254 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 201/253 (79%), Positives = 224/253 (88%) Query: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 MK+ATWNVNSLKVRLPQV +WL +NPVDVLCLQETK D+KFP AEI AAGY V F+GQK Sbjct: 1 MKLATWNVNSLKVRLPQVQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQK 60 Query: 61 TYNGVAILSRHPMTDVVKNNPLFPDEQQRIIAATIEGVRTVCAYIPNGQSLESEKYPYKL 120 TYNGVAILSRHP+TDV KNNPL DEQQRIIA TI+G+R VCAY+PNGQS +S+KY YKL Sbjct: 61 TYNGVAILSRHPITDVTKNNPLLDDEQQRIIAGTIQGIRIVCAYVPNGQSPDSDKYIYKL 120 Query: 121 SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 +WL ALHEWLAQE+ ++P LALLGDYNIAPEDRDVHDP AW GQVLVSEPER AF +LQ Sbjct: 121 NWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQE 180 Query: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 +G TD++R+FEQPEK+YSWWDYRQMGFRLNRGLRIDHILLS L RC+ACVIDKVPRKW Sbjct: 181 MGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKW 240 Query: 241 EQPSDHAPVIATL 253 EQPSDH PVIAT+ Sbjct: 241 EQPSDHTPVIATI 253 >ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] gb|EEO29223.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] Length = 255 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 193/253 (76%), Positives = 221/253 (87%) Query: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 MKIATWNVNSLKVRLP VL+WLE+NPVDVLCLQETKLTDDKFP EI AAGY V F+GQK Sbjct: 1 MKIATWNVNSLKVRLPHVLQWLEDNPVDVLCLQETKLTDDKFPVMEIGAAGYQVAFTGQK 60 Query: 61 TYNGVAILSRHPMTDVVKNNPLFPDEQQRIIAATIEGVRTVCAYIPNGQSLESEKYPYKL 120 TYNGVAILS+ P+TD+VKNNPLFPDEQQRI+AAT++ +R VCAY+PNGQ++ SEKY YKL Sbjct: 61 TYNGVAILSKKPVTDIVKNNPLFPDEQQRIVAATVDNIRIVCAYVPNGQAVGSEKYSYKL 120 Query: 121 SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 WL +L +WLA+E+ K+P LALLGDYNIAPEDRDV+DPVAW+G VLVS PER+AFR LQ Sbjct: 121 DWLRSLTQWLAEERQKHPYLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAFRALQD 180 Query: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 + D+YRLFEQPEK YSWWDYRQ+GF+ NRGLRIDHILLS+ L P CTAC ID++PRKW Sbjct: 181 IDFIDAYRLFEQPEKSYSWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTIDRIPRKW 240 Query: 241 EQPSDHAPVIATL 253 QPSDH PVIA L Sbjct: 241 TQPSDHTPVIAEL 253 >ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 191/254 (75%), Positives = 221/254 (87%) Query: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 MK+ATWNVNSLKVRLPQVL+WL +NP+DVLCLQETK D+KFP AEI AAGY V FSGQK Sbjct: 1 MKLATWNVNSLKVRLPQVLQWLADNPIDVLCLQETKTIDEKFPQAEIEAAGYHVAFSGQK 60 Query: 61 TYNGVAILSRHPMTDVVKNNPLFPDEQQRIIAATIEGVRTVCAYIPNGQSLESEKYPYKL 120 TYNGVAILS+ PMTDVV+NNP F DEQQR+IAATI+GVR +CAYIPNGQ+ +S+KY YKL Sbjct: 61 TYNGVAILSKQPMTDVVRNNPHFADEQQRLIAATIDGVRVICAYIPNGQAPDSDKYQYKL 120 Query: 121 SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA 180 WL L +WLA E A +P+ ALLGDYNIAPEDRDVHDP AW GQ+LVSEPER AF+++ A Sbjct: 121 RWLDGLQQWLALEMAAHPKFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAFQRMIA 180 Query: 181 LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW 240 L LTD++RLFEQ +K++SWWDYRQMGFR N G+RIDHILLS+EL CT+CVIDKVPRKW Sbjct: 181 LELTDAFRLFEQADKLFSWWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVIDKVPRKW 240 Query: 241 EQPSDHAPVIATLA 254 EQPSDH PV+AT+A Sbjct: 241 EQPSDHTPVVATIA 254