BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3752.p         (228 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001351807.1| hypothetical protein mma_0117 [Janthinobacte...    56   4e-06

>ref|YP_001351807.1| hypothetical protein mma_0117 [Janthinobacterium sp. Marseille]
 gb|ABR91950.1| Hypothetical protein mma_0117 [Janthinobacterium sp. Marseille]
          Length = 209

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 29  LACAIGVITVSFVAISLTLAQKISTPGTGDLATWFGAIGTIGTLFYTVRIASTGEKIRRE 88
           +A  + ++ ++ + I+L L    S    GD ATW GA GT+ TL  T+ IA+      R 
Sbjct: 13  IAVCLSILFLAILKITLDLVS--SNNSAGDAATWLGAFGTVFTLAATIWIATRQTIETRR 70

Query: 89  ESMQRAVIQAAGISLQISKLRILLVELQKAMHF----SAINGASIELFIGSGHTLKSASI 144
            ++ +A I AAG+      L     EL+    F    +  N   IE+ + +   L +  +
Sbjct: 71  HNLAKAQIAAAGMRWS---LMFFSSELKSLAGFFGNDTHPNQNHIEVSLKT-LDLIAEQL 126

Query: 145 WSLDDAQKLVALPNDCAIHVA 165
           W  ++   LV LPN+CAIH+A
Sbjct: 127 WKPEEIMHLVPLPNNCAIHIA 147