BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3749.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776504.1| outer membrane protein V [Herbaspirillum ser... 464 e-129 ref|YP_001156815.1| MltA-interacting MipA family protein [Polynu... 211 1e-52 ref|ZP_08274252.1| MltA-interacting MipA family protein [Oxaloba... 207 1e-51 ref|YP_003524058.1| MltA-interacting MipA family protein [Sidero... 192 4e-47 ref|YP_001797931.1| MltA-interacting MipA family protein [Polynu... 133 3e-29 >ref|YP_003776504.1| outer membrane protein V [Herbaspirillum seropedicae SmR1] gb|ADJ64596.1| outer membrane protein V (Scaffolding protein for murein-synthesizing holoenzyme) protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 245/253 (96%), Positives = 247/253 (97%) Query: 1 MKTIFATLSLACCALPALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTV 60 MKTIFATLSLACCALPALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTV Sbjct: 1 MKTIFATLSLACCALPALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTV 60 Query: 61 LPYAYFDYGRFFARVDTFGVKTARMGYGYLELAGRINLEGFDAQGGLQRRSDPIPLGLGS 120 LPYAYFDYGRFFARVDTFGVKTARMGYGYLELAGRINLEGFDAQGGLQRRSDPIPLGLGS Sbjct: 61 LPYAYFDYGRFFARVDTFGVKTARMGYGYLELAGRINLEGFDAQGGLQRRSDPIPLGLGS 120 Query: 121 FQETPIGAFFLNVFHDFNKSHGTLAEAIYAAQLDVGPVSFYPQVGVEYRSGSYNDYFVGV 180 FQETPIGAFFLNVFHDFNKSHGTLAEAIYAAQLDVGPVSFYPQVGVEYR YNDYF GV Sbjct: 121 FQETPIGAFFLNVFHDFNKSHGTLAEAIYAAQLDVGPVSFYPQVGVEYRDSRYNDYFYGV 180 Query: 181 SGQEASSSGLPAYRAGSSTSPLLGLVADMPISGNWHLNLHLRRKWLDNAVADSPIIRRKT 240 SGQEASSSGLPAYRAGSSTSPLLGLVADMPISGNW LNL LRRKWLDNA++DSPIIRRKT Sbjct: 181 SGQEASSSGLPAYRAGSSTSPLLGLVADMPISGNWRLNLTLRRKWLDNAISDSPIIRRKT 240 Query: 241 DDLAILALTYRFK 253 DDLAILALTYRFK Sbjct: 241 DDLAILALTYRFK 253 >ref|YP_001156815.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP35251.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 256 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 100/250 (40%), Positives = 155/250 (62%), Gaps = 5/250 (2%) Query: 9 SLACCALPALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTVLPYAYFDY 68 +L C + L+ + P L D + GD+G Y + + +T LPYA+ DY Sbjct: 7 TLVCLFIVLLSTSLYADEDVPDGLPDHLVGDVGIATYTTNLHIGTEGVQTLPLPYAFVDY 66 Query: 69 GRFFARVDTFGVKTARMGYGYLELAGRINLEGFDAQ----GGLQRRSDPIPLGLGSFQET 124 R F R+D G+KT +MGYGYLE+ G+INL+ + + G R+DPIPLG+G+FQET Sbjct: 67 KRAFVRIDEVGIKTLKMGYGYLEVIGKINLDSYKVKSPINGATLNRTDPIPLGIGTFQET 126 Query: 125 PIGAFFLNVFHDFNKSHGTLAEAIYAAQLDV-GPVSFYPQVGVEYRSGSYNDYFVGVSGQ 183 P+G FF+N +HDF KSHG L E +Y A+++ V+ YPQ+GVE +S Y +Y+ G+SG Sbjct: 127 PVGGFFVNAYHDFGKSHGALYELLYFAEIETYKKVTLYPQLGVERQSSQYANYYYGISGS 186 Query: 184 EASSSGLPAYRAGSSTSPLLGLVADMPISGNWHLNLHLRRKWLDNAVADSPIIRRKTDDL 243 ++ +G AY A ++++ + GL+ ++P+ NW+ N++ +RKW+ + +SP++ R D Sbjct: 187 DSLQTGYSAYTAPATSNLIAGLMIEIPVVDNWYFNIYGKRKWMGGGINNSPVMNRSFQDN 246 Query: 244 AILALTYRFK 253 AL YRFK Sbjct: 247 LFAALAYRFK 256 >ref|ZP_08274252.1| MltA-interacting MipA family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32261.1| MltA-interacting MipA family protein [Oxalobacteraceae bacterium IMCC9480] Length = 240 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 148/241 (61%), Gaps = 14/241 (5%) Query: 17 ALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTVLPYAYFDYGRFFARVD 76 A AQ A PQ R+TGD G VY N S R ++LPY Y DY R FAR D Sbjct: 10 AHAQTALPQ---------RLTGDAGAAVYATTANVRGASYRPSLLPYVYADYQRLFARTD 60 Query: 77 TFGVKTARMGYGYLELAGRINLEGFDAQG----GLQRRSDPIPLGLGSFQETPIGAFFLN 132 TFGVKT +G GYLEL GR++ EG+ A GL+ RS P+PLG+G++QETP G FF+ Sbjct: 61 TFGVKTVALGAGYLELVGRVSQEGYKADSAALRGLRDRSTPVPLGIGTYQETPYGGFFVY 120 Query: 133 VFHDFNKSHGTLAEAIYAAQLDVGPVSFYPQVGVEYRSGSYNDYFVGVSGQEASSSGLPA 192 HD + S G+L EA YAA+ YPQVGVE RS +Y + GV E++ SG+ + Sbjct: 121 AMHDVS-SGGSLLEATYAAEFSFAGFKIYPQVGVERRSAAYVQHVYGVDAAESARSGIAS 179 Query: 193 YRAGSSTSPLLGLVADMPISGNWHLNLHLRRKWLDNAVADSPIIRRKTDDLAILALTYRF 252 YRAG+ST P+ GL A++ + G WHL + RR WLD A+ DSP++ +T +A+TY F Sbjct: 180 YRAGASTVPVAGLAAELSLGGPWHLLVQARRSWLDAAIRDSPLVSTRTQTNGFVAVTYAF 239 Query: 253 K 253 K Sbjct: 240 K 240 >ref|YP_003524058.1| MltA-interacting MipA family protein [Sideroxydans lithotrophicus ES-1] gb|ADE11671.1| MltA-interacting MipA family protein [Sideroxydans lithotrophicus ES-1] Length = 259 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 4/235 (1%) Query: 23 APQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTVLPYAYFDYGRFFARVDTFGVKT 82 A T+ + + GDIG G Y + +VLPYA F+YGR FARVDT G+KT Sbjct: 25 ATMATEAAEFPGSLQGDIGMGAYYTHSIIRGKGDEVSVLPYADFEYGRMFARVDTLGIKT 84 Query: 83 ARMGYGYLELAGRINLEGFDAQG----GLQRRSDPIPLGLGSFQETPIGAFFLNVFHDFN 138 +MGYG+LEL GRI+ +GF G+ R IPLG+G+ Q TP+GA +N+FHD Sbjct: 85 LQMGYGHLELVGRISQDGFSTNSSSLQGIASRETSIPLGIGTLQVTPLGALMVNLFHDVR 144 Query: 139 KSHGTLAEAIYAAQLDVGPVSFYPQVGVEYRSGSYNDYFVGVSGQEASSSGLPAYRAGSS 198 +S G EAIY ++D+ ++ YP +G +Y+S Y Y+ G+S QEA++S AY S Sbjct: 145 RSGGDWFEAIYGGEIDLRRLTLYPLIGADYQSREYVGYYYGISPQEAAASQYAAYAPAGS 204 Query: 199 TSPLLGLVADMPISGNWHLNLHLRRKWLDNAVADSPIIRRKTDDLAILALTYRFK 253 + L GL+ D+ +S ++HLNL++RRKWL +++ SPI+ ++ D LAL+YRFK Sbjct: 205 LNGLFGLIGDIELSDSYHLNLYVRRKWLGSSIRQSPIVSQRYLDTGYLALSYRFK 259 >ref|YP_001797931.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gb|ACB44317.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 167 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 5/167 (2%) Query: 92 LAGRINLEGFDAQGGLQ----RRSDPIPLGLGSFQETPIGAFFLNVFHDFNKSHGTLAEA 147 +AG+I+L+ + + + RSDPIP+G+G+ QETPIG FF N ++DF KS G L E Sbjct: 1 MAGKISLDSYKVKPPINGYGINRSDPIPIGVGTLQETPIGGFFANAYYDFGKSKGMLYEL 60 Query: 148 IYAAQLDV-GPVSFYPQVGVEYRSGSYNDYFVGVSGQEASSSGLPAYRAGSSTSPLLGLV 206 Y +L+ + YPQ+G E +S Y +Y+ G++ E+ ++G AY A ++T+ GL+ Sbjct: 61 SYFGELETYKQIVVYPQIGAERQSNQYANYYYGINPGESLATGYSAYSAPATTNLFAGLM 120 Query: 207 ADMPISGNWHLNLHLRRKWLDNAVADSPIIRRKTDDLAILALTYRFK 253 ++PI W +NL+ +RKW+ + +SP++ R D A+ YRFK Sbjct: 121 IEIPIIDQWFVNLYTKRKWMGGGINNSPVMNRPFQDTIFTAIAYRFK 167