BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3745.p (396 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776500.1| permease [Herbaspirillum seropedicae SmR1] >... 626 e-177 ref|YP_004754166.1| hypothetical protein CFU_3519 [Collimonas fu... 471 e-130 ref|ZP_08274545.1| hypothetical protein IMCC9480_3108 [Oxalobact... 446 e-123 ref|YP_001354150.1| hypothetical protein mma_2460 [Janthinobacte... 445 e-123 ref|YP_001100652.1| hypothetical protein HEAR2400 [Herminiimonas... 416 e-114 >ref|YP_003776500.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ64592.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 349/375 (93%), Positives = 362/375 (96%) Query: 21 MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVLALIGFQSLNYM 80 MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDV+ALIGFQSLNYM Sbjct: 1 MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVIALIGFQSLNYM 60 Query: 81 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVIRFGWPIVALVATLSFVV 140 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPV+RFGWPIVALVA LSFV Sbjct: 61 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVLRFGWPIVALVAALSFVA 120 Query: 141 TPWANEQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIN 200 TPWAN+QSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTI Sbjct: 121 TPWANQQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIG 180 Query: 201 ADGKNSVVVAKEGETQIDPDGEKFVVMNKGRRYDGSPSLPDFQIVDFERYGLLIGNQSQS 260 ADGKNSVVVAKEGET IDPDGEKFVVMN+GRRYDGSP LPDFQIVDFERYGLLIGNQSQ+ Sbjct: 181 ADGKNSVVVAKEGETVIDPDGEKFVVMNQGRRYDGSPGLPDFQIVDFERYGLLIGNQSQN 240 Query: 261 AAGERSARALQMKELLAKQDGYARGELLWRIALPLMALALMLLAIPLSFVNPRAGRSLGL 320 AAGERSARALQM EL+AK DGYARGELLWRIALP MAL LMLLAIPLSFVNPRAGRSLGL Sbjct: 241 AAGERSARALQMNELVAKNDGYARGELLWRIALPFMALTLMLLAIPLSFVNPRAGRSLGL 300 Query: 321 LVALLLFVVYSNTVSVFQASVAQQRMSFVMAWWPVHLIVVALIVGMFVLRLNINHPYHPS 380 LVALLLFVVYSNTVSVFQASVAQ R +F+MAWWPVH++VV LIVGMF LRLNINHPYHPS Sbjct: 301 LVALLLFVVYSNTVSVFQASVAQGRATFMMAWWPVHVVVVLLIVGMFALRLNINHPYHPS 360 Query: 381 RMWSRVRRALTFKRE 395 R+WSRVRRA+TF+RE Sbjct: 361 RLWSRVRRAMTFQRE 375 >ref|YP_004754166.1| hypothetical protein CFU_3519 [Collimonas fungivorans Ter331] gb|AEK63343.1| Putative membrane protein [Collimonas fungivorans Ter331] Length = 403 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 256/383 (66%), Positives = 316/383 (82%), Gaps = 5/383 (1%) Query: 7 PYNDPDTRNQASIPMIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQ 66 P+ DP Q PMIFQRALRREL STAG VFTTLFTI +TVMLIKILGQAAGGQ+ASQ Sbjct: 11 PFFDP----QLYSPMIFQRALRRELISTAGAVFTTLFTIIITVMLIKILGQAAGGQIASQ 66 Query: 67 DVLALIGFQSLNYMPIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVIRFG 126 DV+ALIGFQSLNYMPI+LILTG+ISVLLV+TRSYQDSE+VVWFA G SL RWI PV+ FG Sbjct: 67 DVVALIGFQSLNYMPILLILTGYISVLLVVTRSYQDSEMVVWFASGQSLVRWIQPVLWFG 126 Query: 127 WPIVALVATLSFVVTPWANEQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISG 186 P++ L LSFV TPWAN QS++YR RFE+REDI+RVSPGKFQESA+ANRI+FVEG++G Sbjct: 127 LPLIILTTFLSFVATPWANSQSAQYRERFEKREDISRVSPGKFQESASANRIYFVEGLAG 186 Query: 187 DASKVRNIFVNTINADGKNSVVVAKEGETQIDPDGEKFVVMNKGRRYDGSPSLPDFQIVD 246 DASKV+N+FVNT DG+NS+VVAKEG ++D +G+KF++++KGRRYD S +F+I++ Sbjct: 187 DASKVKNVFVNT-QQDGRNSIVVAKEGNIELDKNGDKFLILSKGRRYDVLSSQNEFRIME 245 Query: 247 FERYGLLIGNQSQSAAGERSARALQMKELLAKQDGYARGELLWRIALPLMALALMLLAIP 306 FERYG+L+ + SQ+ G++SARAL +LL ++G+ GELLWR++LPLMAL LMLLAIP Sbjct: 246 FERYGVLVASNSQAVNGDKSARALPTGDLLKDRNGFNMGELLWRLSLPLMALCLMLLAIP 305 Query: 307 LSFVNPRAGRSLGLLVALLLFVVYSNTVSVFQASVAQQRMSFVMAWWPVHLIVVALIVGM 366 LSFVNPR GRS LL+ALLLF+ YSN ++FQASV Q RMSF +AWWP+HL+V+ +I + Sbjct: 306 LSFVNPRVGRSASLLIALLLFITYSNVTNIFQASVVQGRMSFGIAWWPMHLVVLIIIGLL 365 Query: 367 FVLRLNINHPYHPSRMWSRVRRA 389 F+ RLN+N HP MWS V+ A Sbjct: 366 FMWRLNVNSRCHPLVMWSAVKHA 388 >ref|ZP_08274545.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31984.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] Length = 376 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 235/374 (62%), Positives = 298/374 (79%), Gaps = 1/374 (0%) Query: 21 MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVLALIGFQSLNYM 80 MIFQRALRREL STAG VFTTLFTIT+TVMLIKILGQAAGG+VAS+DVLALIGF +LNYM Sbjct: 1 MIFQRALRRELISTAGAVFTTLFTITITVMLIKILGQAAGGKVASEDVLALIGFAALNYM 60 Query: 81 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVIRFGWPIVALVATLSFVV 140 P+ILILT FISVLLV+TRSYQDSE+VVWFA G+SLTRWI V+ G P+V ++A LSF Sbjct: 61 PVILILTTFISVLLVVTRSYQDSEMVVWFASGLSLTRWIPTVLSCGLPVVLVIALLSFYA 120 Query: 141 TPWANEQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIN 200 TPWAN SSE+R RFE+R DIA+V+PGKFQESA++NR+FFVEG++GDA VRN+FVNT+ Sbjct: 121 TPWANRSSSEFRERFEKRADIAKVAPGKFQESASSNRVFFVEGVTGDAMNVRNVFVNTVR 180 Query: 201 ADGKNSVVVAKEGETQIDPDGEKFVVMNKGRRYDGSPSLPDFQIVDFERYGLLIGNQSQS 260 DGK+S+VV+KEG T++D +G+KF+V++ GRRY+G+ DFQ+++FE YG+LI + Sbjct: 181 -DGKSSIVVSKEGRTEVDANGDKFLVLSNGRRYEGTLDERDFQLMEFESYGVLISSAVPG 239 Query: 261 AAGERSARALQMKELLAKQDGYARGELLWRIALPLMALALMLLAIPLSFVNPRAGRSLGL 320 + S+R++ LLA DG+ +GELLWR++LPLM L LMLLAIPL FVNPR GRS L Sbjct: 240 LMADLSSRSMSTMALLANPDGFNQGELLWRLSLPLMCLFLMLLAIPLGFVNPRGGRSANL 299 Query: 321 LVALLLFVVYSNTVSVFQASVAQQRMSFVMAWWPVHLIVVALIVGMFVLRLNINHPYHPS 380 ++ALLLFV YSN +S+ QA+VAQ R+ +AWWPVH++ +A+I +F RL +N YHP Sbjct: 300 IIALLLFVFYSNMISLMQAAVAQNRLGVWLAWWPVHVLAMAVIALLFSWRLKMNSAYHPL 359 Query: 381 RMWSRVRRALTFKR 394 ++ RR KR Sbjct: 360 FWLAKARRRNLDKR 373 >ref|YP_001354150.1| hypothetical protein mma_2460 [Janthinobacterium sp. Marseille] gb|ABR90098.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 376 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 225/368 (61%), Positives = 297/368 (80%), Gaps = 1/368 (0%) Query: 21 MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVLALIGFQSLNYM 80 MIFQRALRR+L STAG VFTTLFTIT+TV LI+ILGQAAGG++AS DV+AL+GF +LNY+ Sbjct: 1 MIFQRALRRDLLSTAGAVFTTLFTITITVTLIRILGQAAGGKIASSDVVALLGFSALNYL 60 Query: 81 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVIRFGWPIVALVATLSFVV 140 PI+L LTGF++VLLV+TRSYQDSE+VVWFA G+SL +WI PV+ FG PIV L A LS + Sbjct: 61 PILLNLTGFVAVLLVVTRSYQDSEMVVWFASGLSLAKWIQPVLMFGLPIVTLTAVLSLFL 120 Query: 141 TPWANEQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIN 200 TPW+NEQS+ Y+ R+ REDIARVSPGKFQES++++R+FFVEG+SGD++KV+NIFV+++ Sbjct: 121 TPWSNEQSAVYKERYANREDIARVSPGKFQESSSSDRVFFVEGVSGDSTKVKNIFVSSV- 179 Query: 201 ADGKNSVVVAKEGETQIDPDGEKFVVMNKGRRYDGSPSLPDFQIVDFERYGLLIGNQSQS 260 +GK SVVVAKEG +ID G+KF+VM++GRRYDG P+ DF++++F+RYG+L+ QS++ Sbjct: 180 LNGKTSVVVAKEGTVEIDQAGDKFLVMHQGRRYDGIPTQSDFELMEFDRYGVLVATQSKA 239 Query: 261 AAGERSARALQMKELLAKQDGYARGELLWRIALPLMALALMLLAIPLSFVNPRAGRSLGL 320 G+ SARA KELL+ ++ + GE+LWR++LPLM + LMLLAIPL FVNPR GRS L Sbjct: 240 LVGDTSARATSTKELLSNRNNFNDGEILWRVSLPLMGILLMLLAIPLGFVNPRGGRSANL 299 Query: 321 LVALLLFVVYSNTVSVFQASVAQQRMSFVMAWWPVHLIVVALIVGMFVLRLNINHPYHPS 380 L+AL LFV YSN +S QA+V Q R + ++AWWPVHL+ + ++ F RL +N YHP Sbjct: 300 LIALFLFVFYSNMLSFAQATVVQNRSTLMLAWWPVHLVALIVVAVFFTWRLKVNSRYHPL 359 Query: 381 RMWSRVRR 388 WS ++R Sbjct: 360 VAWSLLKR 367 >ref|YP_001100652.1| hypothetical protein HEAR2400 [Herminiimonas arsenicoxydans] emb|CAL62531.1| putative permease [Herminiimonas arsenicoxydans] Length = 347 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 210/345 (60%), Positives = 275/345 (79%), Gaps = 1/345 (0%) Query: 50 MLIKILGQAAGGQVASQDVLALIGFQSLNYMPIILILTGFISVLLVMTRSYQDSEIVVWF 109 MLI+ILGQAAGG+VAS DV+ALIGF +LNY+PIIL L GF+SVLLV+TRSYQDSE+VVWF Sbjct: 1 MLIRILGQAAGGKVASADVVALIGFSALNYLPIILNLAGFMSVLLVVTRSYQDSEMVVWF 60 Query: 110 ACGMSLTRWIAPVIRFGWPIVALVATLSFVVTPWANEQSSEYRSRFEQREDIARVSPGKF 169 A G+SL RWI PV+ F PIV + LS +TPW+N+QS+ Y+ R+ REDIARVSPGKF Sbjct: 61 ASGLSLARWIPPVLVFALPIVVMTTLLSLFLTPWSNQQSAIYKERYANREDIARVSPGKF 120 Query: 170 QESAAANRIFFVEGISGDASKVRNIFVNTINADGKNSVVVAKEGETQIDPDGEKFVVMNK 229 QES++++R+FFVEG++GD+SKVRNIFV+++ +GK SVVVAKEG +IDP G+KF+VM++ Sbjct: 121 QESSSSDRVFFVEGVAGDSSKVRNIFVSSVR-NGKTSVVVAKEGTVEIDPAGDKFLVMHQ 179 Query: 230 GRRYDGSPSLPDFQIVDFERYGLLIGNQSQSAAGERSARALQMKELLAKQDGYARGELLW 289 GRRYDG P+ DFQ+++F+RYG+L+ +QSQ+ G+ SARAL +ELL ++ + GELLW Sbjct: 180 GRRYDGVPTQSDFQLMEFDRYGVLVASQSQALVGDTSARALTTQELLRNRNNFNDGELLW 239 Query: 290 RIALPLMALALMLLAIPLSFVNPRAGRSLGLLVALLLFVVYSNTVSVFQASVAQQRMSFV 349 R++LPLM + LMLLAIPL FVNPR GRS LL+AL LFV YSN +S QA V Q R +F+ Sbjct: 240 RVSLPLMGVLLMLLAIPLGFVNPRGGRSANLLIALFLFVFYSNMLSYAQAIVVQNRAAFM 299 Query: 350 MAWWPVHLIVVALIVGMFVLRLNINHPYHPSRMWSRVRRALTFKR 394 MAWWPVHL+ + ++V F RL +N YHP +W+ ++RA +R Sbjct: 300 MAWWPVHLVALLVVVVFFSWRLKVNSRYHPLVVWAMLKRAYFAQR 344