BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3740.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001100649.1| uroporphyrin-III C-methyltransferase [Hermin...   155   2e-36
ref|YP_001354147.1| uroporphyrin-III C-methyltransferase [Janthi...   154   6e-36
ref|YP_004754159.1| uroporphyrinogen-III methyltransferase [Coll...   153   1e-35
ref|YP_003776496.1| uroporphyrinogen-III C-methyltransferase [He...   150   7e-35
ref|YP_001155127.1| uroporphyrin-III C-methyltransferase [Polynu...   142   2e-32

>ref|YP_001100649.1| uroporphyrin-III C-methyltransferase [Herminiimonas arsenicoxydans]
 emb|CAL62528.1| Uroporphyrinogen-III C-methyltransferase [Herminiimonas
           arsenicoxydans]
          Length = 243

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 81/97 (83%), Positives = 89/97 (91%)

Query: 24  GKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEILALCPQAVQVSVGKRSGQRS 83
           GKVYLIGAGPGA DLITVRGAR+LAQADVVLHDALVT E+L LCPQA ++SVGKRSGQRS
Sbjct: 9   GKVYLIGAGPGAIDLITVRGARILAQADVVLHDALVTPEMLTLCPQAEKISVGKRSGQRS 68

Query: 84  TAQQVINERLIECARQYRLVVRLKGGDPMLFGRADEE 120
           TAQ  IN+ LIECA +Y+L+VRLKGGDPMLFGRADEE
Sbjct: 69  TAQIAINQLLIECAEKYQLIVRLKGGDPMLFGRADEE 105


>ref|YP_001354147.1| uroporphyrin-III C-methyltransferase [Janthinobacterium sp.
           Marseille]
 gb|ABR89207.1| uroporphyrin-III C-methyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 239

 Score =  154 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 80/104 (76%), Positives = 91/104 (87%)

Query: 17  TDAAPTAGKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEILALCPQAVQVSVG 76
           T+     GKVYLIGAGPGA DLITVRGAR+LAQADVVLHDALVT E+L LCPQA ++SVG
Sbjct: 2   TEEKKAYGKVYLIGAGPGAVDLITVRGARILAQADVVLHDALVTPEMLELCPQAEKISVG 61

Query: 77  KRSGQRSTAQQVINERLIECARQYRLVVRLKGGDPMLFGRADEE 120
           KRSGQRSTAQ  IN+ L++CA +Y+L+VRLKGGDPMLFGRADEE
Sbjct: 62  KRSGQRSTAQLAINQLLVDCAAKYKLIVRLKGGDPMLFGRADEE 105


>ref|YP_004754159.1| uroporphyrinogen-III methyltransferase [Collimonas fungivorans
           Ter331]
 gb|AEK63336.1| Uroporphyrinogen-III methyltransferase [Collimonas fungivorans
           Ter331]
          Length = 264

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 85/110 (77%), Positives = 96/110 (87%)

Query: 11  ASSASATDAAPTAGKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEILALCPQA 70
           A  A+ +   P  GKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEE+LALCPQA
Sbjct: 5   AMQATHSSRKPAYGKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEMLALCPQA 64

Query: 71  VQVSVGKRSGQRSTAQQVINERLIECARQYRLVVRLKGGDPMLFGRADEE 120
           V++ VGKR G+ STAQQ IN+++I+ AR+Y LVVRLKGGDPMLFGRADEE
Sbjct: 65  VKIPVGKRCGKLSTAQQFINKQMIDSARKYALVVRLKGGDPMLFGRADEE 114


>ref|YP_003776496.1| uroporphyrinogen-III C-methyltransferase [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ64588.1| uroporphyrinogen-III C-methyltransferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 253

 Score =  150 bits (378), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 84/114 (73%), Positives = 99/114 (86%), Gaps = 3/114 (2%)

Query: 10  SASSASATDAAPTA---GKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEILAL 66
           +A+S S+   AP+    G V+L+G+GPGAADL+TVR ARLLAQA++VLHDALVT +ILAL
Sbjct: 6   AATSHSSDSPAPSPEHPGMVWLVGSGPGAADLLTVRAARLLAQAEIVLHDALVTPDILAL 65

Query: 67  CPQAVQVSVGKRSGQRSTAQQVINERLIECARQYRLVVRLKGGDPMLFGRADEE 120
           CPQAV VSVGKRSGQRSTAQ VIN++L+E A+QYR VVRLKGGDPMLFGRADEE
Sbjct: 66  CPQAVLVSVGKRSGQRSTAQPVINQKLVEAAQQYRRVVRLKGGDPMLFGRADEE 119


>ref|YP_001155127.1| uroporphyrin-III C-methyltransferase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gb|ABP33563.1| uroporphyrinogen-III C-methyltransferase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 273

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 73/109 (66%), Positives = 94/109 (86%)

Query: 12  SSASATDAAPTAGKVYLIGAGPGAADLITVRGARLLAQADVVLHDALVTEEILALCPQAV 71
           + +++   +   GKVYL+GAGPGAADLITVRGA+LLAQAD+V HDALV  E+LALCPQA+
Sbjct: 2   NQSTSKPTSQAQGKVYLVGAGPGAADLITVRGAKLLAQADIVFHDALVEPEMLALCPQAI 61

Query: 72  QVSVGKRSGQRSTAQQVINERLIECARQYRLVVRLKGGDPMLFGRADEE 120
           Q++VGKR G+ S+AQ+ IN+RL++ A++Y+ VVRLKGGDPMLFGRADEE
Sbjct: 62  QIAVGKRCGKLSSAQEFINKRLVDAAQKYQTVVRLKGGDPMLFGRADEE 110