BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3732.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776489.1| cys regulon transcription regulator protein ... 615 e-174 ref|YP_004754152.1| regulatory protein CysB [Collimonas fungivor... 566 e-159 ref|YP_001354140.1| transcriptional regulator CysB-like protein ... 550 e-154 ref|YP_001100642.1| transcriptional regulator CysB-like protein ... 540 e-151 ref|ZP_08273585.1| Regulatory protein CysB [Oxalobacteraceae bac... 534 e-150 >ref|YP_003776489.1| cys regulon transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64581.1| cys regulon transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 310/313 (99%), Positives = 312/313 (99%) Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 Query: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP Sbjct: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 Query: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ Sbjct: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 Query: 181 SRSLTLEEIAGNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 S+SLTLEEIA NPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV Sbjct: 181 SKSLTLEEIAANPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 Query: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLM 300 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKL+ Sbjct: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLI 300 Query: 301 AQVMEGEKDMYEL 313 AQVMEGEKDMYEL Sbjct: 301 AQVMEGEKDMYEL 313 >ref|YP_004754152.1| regulatory protein CysB [Collimonas fungivorans Ter331] gb|AEK63329.1| Regulatory protein CysB [Collimonas fungivorans Ter331] Length = 313 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 275/313 (87%), Positives = 299/313 (95%) Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 Query: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 EPGRAVLRSVELIMQE+DGLKRIG E+AAHDSGSFTIATTHTQARYALPKVVQAFTQK+P Sbjct: 61 EPGRAVLRSVELIMQEIDGLKRIGNEYAAHDSGSFTIATTHTQARYALPKVVQAFTQKFP 120 Query: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 KV LSLLQGNPKQ+ +MVRNDQAD+A+ATEA+ + +GLV+LPCYQWEHVVVVPPDHPLLQ Sbjct: 121 KVRLSLLQGNPKQVADMVRNDQADLALATEAIVNADGLVTLPCYQWEHVVVVPPDHPLLQ 180 Query: 181 SRSLTLEEIAGNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 S+++TLEEIA PLITYDSAF+GR+KIDHAFSLR LKPDV+LEAIDADVIKTYVELGMGV Sbjct: 181 SKAITLEEIAAFPLITYDSAFTGRTKIDHAFSLRNLKPDVLLEAIDADVIKTYVELGMGV 240 Query: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLM 300 GIIAG+AFDAERD GLR+IP GHLFGTN+SR A+KQGAYLR YVYTFIELLAPT+NRKL+ Sbjct: 241 GIIAGMAFDAERDTGLRSIPVGHLFGTNISRAAVKQGAYLRSYVYTFIELLAPTMNRKLI 300 Query: 301 AQVMEGEKDMYEL 313 QVM GEKDMYEL Sbjct: 301 EQVMNGEKDMYEL 313 >ref|YP_001354140.1| transcriptional regulator CysB-like protein [Janthinobacterium sp. Marseille] gb|ABR89294.1| cys regulon transcriptionnal regulator protein [Janthinobacterium sp. Marseille] Length = 313 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 268/313 (85%), Positives = 295/313 (94%) Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 MNLHQ RFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELEEELGVDIF+RHGKRIRGLT Sbjct: 1 MNLHQLRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEEELGVDIFSRHGKRIRGLT 60 Query: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 EPGRAVL+SVELIMQE+DGLKRIG EFAAHDSGSFTIATTHTQARY+LPKVVQAFTQK+P Sbjct: 61 EPGRAVLKSVELIMQEIDGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFP 120 Query: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 KV LSLLQGNPKQ+ +MV DQAD+AIATE++AS EGL+SLPCYQWEH VVVP DHPLL+ Sbjct: 121 KVRLSLLQGNPKQVADMVLMDQADLAIATESIASIEGLISLPCYQWEHQVVVPVDHPLLK 180 Query: 181 SRSLTLEEIAGNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 S+S+TLEE+ PLITYDSAF+GR+KIDHAF+LR LKPD++LEAIDADVIKTYVELGMG+ Sbjct: 181 SKSITLEELTAYPLITYDSAFAGRNKIDHAFALRNLKPDILLEAIDADVIKTYVELGMGI 240 Query: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLM 300 GIIAG+AFDAERD+ LRAIPAGHLFGTNVSRVALKQGAYLR YV+TFIELL PTLNRKL+ Sbjct: 241 GIIAGMAFDAERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLV 300 Query: 301 AQVMEGEKDMYEL 313 QV+ GEKDMYEL Sbjct: 301 EQVLNGEKDMYEL 313 >ref|YP_001100642.1| transcriptional regulator CysB-like protein [Herminiimonas arsenicoxydans] emb|CAL62521.1| HTH-type transcriptional regulator cysB (Cys regulon transcriptional activator) [Herminiimonas arsenicoxydans] Length = 313 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 262/313 (83%), Positives = 293/313 (93%) Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 MNLHQ RFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELEEELGVDIF+RHGKRIRGLT Sbjct: 1 MNLHQLRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEEELGVDIFSRHGKRIRGLT 60 Query: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 EPGRAVL+SVE IM E++GLKRIG EFAAHDSGSFTIATTHTQARY+LPKVVQAFTQK+P Sbjct: 61 EPGRAVLKSVEAIMLEIEGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFP 120 Query: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 KV LSLLQGNPKQI EMV DQAD+AIATEA+A+ +GL+SLPCYQWEH +V+P DHPLL+ Sbjct: 121 KVRLSLLQGNPKQIAEMVLMDQADLAIATEAIANMDGLISLPCYQWEHQIVLPLDHPLLK 180 Query: 181 SRSLTLEEIAGNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 S+S+TLEE+A P+ITYDSAF+GR+KIDHAF+LR LKPD++LEAIDADVIKTYVELGMG+ Sbjct: 181 SKSITLEELAAYPIITYDSAFAGRNKIDHAFNLRNLKPDILLEAIDADVIKTYVELGMGI 240 Query: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLM 300 GIIAG+AFD ERD+ LRAIPAGHLFGTNVSRVALKQGAYLR YV+TFIELL PTLNRKL+ Sbjct: 241 GIIAGMAFDTERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLV 300 Query: 301 AQVMEGEKDMYEL 313 QV+ G+KDMYEL Sbjct: 301 EQVLSGDKDMYEL 313 >ref|ZP_08273585.1| Regulatory protein CysB [Oxalobacteraceae bacterium IMCC9480] gb|EGF32946.1| Regulatory protein CysB [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 261/313 (83%), Positives = 292/313 (93%) Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 MNLHQFRFVREAVRQN+NLTEAAKAL+TSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALFTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60 Query: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120 EPGRAVL++VE+IMQE+D LK IGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQ++P Sbjct: 61 EPGRAVLKAVEVIMQEIDSLKSIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQRFP 120 Query: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180 KV LSLLQGNPKQ+ ++V + ADIA+ATE++ + GLVS+PCYQWEHVVVVPP+HPLL+ Sbjct: 121 KVRLSLLQGNPKQVADLVLSGHADIALATESITTVAGLVSIPCYQWEHVVVVPPEHPLLK 180 Query: 181 SRSLTLEEIAGNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240 S+SLTL+EIA PLITYDSAF+GR+KIDHAF LR LKPDV+LEAIDADVIKTYVELG+GV Sbjct: 181 SKSLTLDEIAAYPLITYDSAFTGRAKIDHAFQLRNLKPDVLLEAIDADVIKTYVELGLGV 240 Query: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLM 300 GIIAG+A+DA+RD+ LR I AGHLFGTNVSRVALKQGAYLR YVYTFIELL PTLNRKL+ Sbjct: 241 GIIAGMAYDADRDKNLRMISAGHLFGTNVSRVALKQGAYLRSYVYTFIELLTPTLNRKLI 300 Query: 301 AQVMEGEKDMYEL 313 QVM GEK+MYEL Sbjct: 301 EQVMSGEKEMYEL 313