BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3730.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776487.1| chemotaxis phosphatase [Herbaspirillum serop... 334 9e-90 ref|YP_001352776.1| CheZ chemotaxis protein [Janthinobacterium s... 253 2e-65 ref|YP_001099263.1| chemotaxis protein CheZ-like [Herminiimonas ... 244 8e-63 ref|ZP_08276040.1| Chemotaxis response - phosphatase CheZ [Oxalo... 243 2e-62 ref|ZP_03699452.1| chemotaxis phosphatase, CheZ [Lutiella nitrof... 172 4e-41 >ref|YP_003776487.1| chemotaxis phosphatase [Herbaspirillum seropedicae SmR1] gb|ADJ64579.1| chemotaxis phosphatase protein [Herbaspirillum seropedicae SmR1] Length = 246 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 207/249 (83%), Positives = 219/249 (87%), Gaps = 3/249 (1%) Query: 1 MSDDVDLEALFDEISSQTLPGMTAEPATAAAAPAAAGTEEAAAGEQEDQSDKPMYERLGG 60 MSDDVDLEALFDEIS+QTLP MTA T A A A A A EDQSDKPMY RLGG Sbjct: 1 MSDDVDLEALFDEISAQTLPAMTA---TGEEAVAQAADGAAEAAAPEDQSDKPMYARLGG 57 Query: 61 IVRLLHDSMRELGYDRSLTDVAEQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRL 120 IVRLLHDSMRELGYDRSL DVA QIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRL Sbjct: 58 IVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRL 117 Query: 121 QEQAKDINARWTKLYAGQMNIEEFKALAGDSQKFSNSVMESTEAEKARMLEIMMAQDFQD 180 QEQAKDIN RW++LYAGQM+I+EFK LAGDSQKFS +V+ESTEAEKARMLEIMMAQDFQD Sbjct: 118 QEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQD 177 Query: 181 ITGQLIKKIVGITAAAERELAQLLRDNAPPEVKAQIDADKPATLMNGPSVGGTAMAQDDV 240 ITGQLIKKIVGIT AERELAQLLRDNAPPEV+AQI+A+KP +LMNGP+ GTAM Q DV Sbjct: 178 ITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPASPGTAMGQTDV 237 Query: 241 DDLLDSLGF 249 DDLLDSLGF Sbjct: 238 DDLLDSLGF 246 >ref|YP_001352776.1| CheZ chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR90007.1| CheZ chemotaxis protein [Janthinobacterium sp. Marseille] Length = 263 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 144/203 (70%), Positives = 167/203 (82%) Query: 47 EDQSDKPMYERLGGIVRLLHDSMRELGYDRSLTDVAEQIGDAQSRLEHIATLTEQAANKV 106 ED DKPM+ERLGGIVRLLHDS+RELGYDRSL++VA +I DAQ RLE++ATLTEQAANKV Sbjct: 61 EDNGDKPMFERLGGIVRLLHDSLRELGYDRSLSNVASEITDAQGRLEYVATLTEQAANKV 120 Query: 107 LNALDSGMPAQDRLQEQAKDINARWTKLYAGQMNIEEFKALAGDSQKFSNSVMESTEAEK 166 LNA+D GMP QD L + AKD++ARW +L+ G+++++EFK LA DS++F+ V E TEAEK Sbjct: 121 LNAIDVGMPEQDALSKSAKDMDARWAQLFEGKLSVDEFKTLANDSRQFAGKVTEVTEAEK 180 Query: 167 ARMLEIMMAQDFQDITGQLIKKIVGITAAAERELAQLLRDNAPPEVKAQIDADKPATLMN 226 AR+LEIMMAQDFQDITGQLIKKIV IT AE ELAQLLRDNAPPEVKA +KP LMN Sbjct: 181 ARLLEIMMAQDFQDITGQLIKKIVAITHKAESELAQLLRDNAPPEVKAAHPENKPVELMN 240 Query: 227 GPSVGGTAMAQDDVDDLLDSLGF 249 GPS AM QDDVD LL LGF Sbjct: 241 GPSAPAIAMVQDDVDSLLADLGF 263 >ref|YP_001099263.1| chemotaxis protein CheZ-like [Herminiimonas arsenicoxydans] emb|CAL61136.1| putative chemotaxis phosphatase, CheZ-like [Herminiimonas arsenicoxydans] Length = 253 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 161/254 (63%), Positives = 189/254 (74%), Gaps = 6/254 (2%) Query: 1 MSDDVD-LEALFDEISSQTLPGMTAEPATAAAAPAAAGTEEAAAGEQEDQSDKPMYERLG 59 MS DVD +ALF+EIS+Q + A PA A AA + ED S+KPM+ERLG Sbjct: 1 MSGDVDDFDALFEEISAQRAETVATAAPAVTAPPAPAARAPAAEPD-EDLSEKPMFERLG 59 Query: 60 GIVRLLHDSMRELGYDRSLTDVAEQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDR 119 GIVRLLHDS+RELGYDRSL+DVA +I DAQ RLE++ATLTEQAANKVLNA+D GMP QD Sbjct: 60 GIVRLLHDSLRELGYDRSLSDVASEITDAQGRLEYVATLTEQAANKVLNAIDIGMPQQDA 119 Query: 120 LQEQAKDINARWTKLYAGQMNIEEFKALAGDSQKFSNSVMESTEAEKARMLEIMMAQDFQ 179 L + AK+++ RW +L+ G+++++EFK LA DS++FS V E TEAEKAR+LEIMMAQDFQ Sbjct: 120 LSKTAKEMDTRWAQLFDGKLSVDEFKKLATDSRQFSAKVAEVTEAEKARLLEIMMAQDFQ 179 Query: 180 DITGQLIKKIVGITAAAERELAQLLRDNAPPEVKA----QIDADKPATLMNGPSVGGTAM 235 DITGQLIKKIV IT AE ELAQLLRDNAPPE+KA D P LMNGPS AM Sbjct: 180 DITGQLIKKIVTITHKAESELAQLLRDNAPPEIKAARAEAKPGDAPVQLMNGPSAPAIAM 239 Query: 236 AQDDVDDLLDSLGF 249 QDDVD LL LGF Sbjct: 240 VQDDVDGLLADLGF 253 >ref|ZP_08276040.1| Chemotaxis response - phosphatase CheZ [Oxalobacteraceae bacterium IMCC9480] gb|EGF30490.1| Chemotaxis response - phosphatase CheZ [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 151/256 (58%), Positives = 188/256 (73%), Gaps = 9/256 (3%) Query: 1 MSDDVDLEALFDEISSQTLPGMTAEPATAAAAPAAAGTEEAAAGEQEDQ-------SDKP 53 MSDD D ALF+E+++Q + A APA G + + EQ + SD P Sbjct: 1 MSDDFD--ALFEEVAAQRTATLADPEPEATTAPATTGAKISQEQEQPEHDATQSRTSDNP 58 Query: 54 MYERLGGIVRLLHDSMRELGYDRSLTDVAEQIGDAQSRLEHIATLTEQAANKVLNALDSG 113 M+ERLGGIVRLLHDS+RELGYDR+L QI DAQ RLE+IATLTEQAANKVLN +D G Sbjct: 59 MFERLGGIVRLLHDSLRELGYDRTLHVATSQITDAQDRLEYIATLTEQAANKVLNTIDEG 118 Query: 114 MPAQDRLQEQAKDINARWTKLYAGQMNIEEFKALAGDSQKFSNSVMESTEAEKARMLEIM 173 MPAQD L +QA+D+++RWT+LY G+++++EFK LA DS+ F+ +V+ +T+ EKAR+LEIM Sbjct: 119 MPAQDALAKQARDMDSRWTQLYDGKLSVDEFKVLAADSRSFAGTVLTNTDTEKARLLEIM 178 Query: 174 MAQDFQDITGQLIKKIVGITAAAERELAQLLRDNAPPEVKAQIDADKPATLMNGPSVGGT 233 MAQDFQDITGQLIKKIV IT E ELAQLLRDNAPPE+ + +K + LM GP++ G Sbjct: 179 MAQDFQDITGQLIKKIVVITQKVEIELAQLLRDNAPPELLKERREEKESDLMQGPAIVGV 238 Query: 234 AMAQDDVDDLLDSLGF 249 AM QDDVD LLD LGF Sbjct: 239 AMQQDDVDSLLDGLGF 254 >ref|ZP_03699452.1| chemotaxis phosphatase, CheZ [Lutiella nitroferrum 2002] gb|EEG07632.1| chemotaxis phosphatase, CheZ [Lutiella nitroferrum 2002] Length = 249 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 110/252 (43%), Positives = 158/252 (62%), Gaps = 17/252 (6%) Query: 3 DDVDLEALFDEISSQTLPGMTAEPATAAAAPAAAGTEEAAAGEQEDQSDKPMYERLGGIV 62 D DLEALFD I+ Q G P A+ A +A + AA G S MYE++G + Sbjct: 10 DTPDLEALFDSIAQQHQAGT---PQIASEADSATASTSAAEG-----SPSVMYEQIGQLT 61 Query: 63 RLLHDSMRELGYDRSLTDVAEQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQE 122 R LH ++R++GYD+SL VA I DA+ RL +I+TLTE AA +VLNA D P QD L+ Sbjct: 62 RKLHSALRDMGYDKSLERVANAIPDARDRLSYISTLTESAAERVLNATDIAKPIQDELES 121 Query: 123 QAKDINARWTKLYAGQMNIEEFKALAGDSQKFSNSVMESTEAEKARMLEIMMAQDFQDIT 182 AK ++ RW +L+A ++++EF+ L+ D+ ++ SV E T+A A++L+I+MAQDFQD+T Sbjct: 122 NAKQLSERWNRLFANMLSVDEFRQLSQDTHRYLQSVPEQTQATSAQLLDIVMAQDFQDLT 181 Query: 183 GQLIKKIVGITAAAERELAQLLRDNAPPEVKAQIDADKPATLMNGPSVGGTAMA-----Q 237 GQ+IKK++G+ E +L L + +P E K +ID TL+NGP + + Q Sbjct: 182 GQVIKKMMGMVKTIETDLVAFLIEFSPEEKKTEID----PTLLNGPVINPEGRSDVVTNQ 237 Query: 238 DDVDDLLDSLGF 249 VDDLL+SLGF Sbjct: 238 QQVDDLLESLGF 249