BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3726.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754134.1| Fe3+-siderophore ABC transporter permease [C... 251 8e-65 ref|ZP_08276042.1| ABC-type Fe3+-siderophore transport system pe... 217 2e-54 ref|YP_002513648.1| transporter permease [Thioalkalivibrio sulfi... 196 5e-48 ref|YP_002006440.1| cobalamin transporter, inner membrane compon... 186 4e-45 ref|YP_727415.1| ABC-type cobalamin transporter, permease compon... 185 9e-45 >ref|YP_004754134.1| Fe3+-siderophore ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK63311.1| ABC-type Fe3+-siderophore transport system permease component [Collimonas fungivorans Ter331] Length = 328 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 219/326 (67%), Positives = 257/326 (78%), Gaps = 5/326 (1%) Query: 1 MRRYLPVLCTLLLLSLLALSAAVLCGSTGCLRPSASADQVAMLLSLRVPRALTAFAVGGA 60 +RR L +LC L + + LAL+ AV CGS+GC + DQV LSLR+PRALTAF VGG Sbjct: 7 LRRALAILCCLAVFAALALALAVSCGSSGC---GLAVDQV--YLSLRLPRALTAFVVGGL 61 Query: 61 LALSGALMQVLLRNPLADPYVLGLSGGSAAGALLAMLAALRLGWPVQAVTAPGALLGAGL 120 LAL+GALMQVLLRNPLADPYVLGLSGGSAAGAL A+L A R G+ A A GA +GAGL Sbjct: 62 LALAGALMQVLLRNPLADPYVLGLSGGSAAGALSALLVASRFGFMGDAAAALGAAVGAGL 121 Query: 121 AMLLLFGLVRPSLRHLAVSPLLSSQRLLLTGVMLAAGFGALISLALSIAPDAQLRGMVFW 180 A+LLLFGL R +LR L S RL+LTGVM+AAGFGA+++L L++APD +LRGM+FW Sbjct: 122 AVLLLFGLARQALRRLPDVGQHSGHRLILTGVMIAAGFGAIVTLVLTLAPDGELRGMLFW 181 Query: 181 LIGDLDDARLLPLMAPVLLLALLWSWRHAPSLNLLARGDAFAQLLGVPVMRLRVMLLCVA 240 L+GDL+D RLL A +LLL L+WS +A LNLLARG+ FAQLLGVPV+RLR++ LC A Sbjct: 182 LMGDLEDGRLLLPAAVLLLLILIWSIFNARQLNLLARGEGFAQLLGVPVLRLRLLTLCAA 241 Query: 241 AACTAGAVAMAGTIGFVGLVVPHGLRLLVGNDQRLLLPACVLGGGAMLTLADLLARTVAA 300 + TA AV +AGTIGF+GLVVPH +RLLVGNDQR+LLPA VL GGA L LADL ART A Sbjct: 242 SLATAAAVTVAGTIGFIGLVVPHAIRLLVGNDQRILLPASVLTGGAALALADLAARTAVA 301 Query: 301 PVQLPVGVITALVGVPMFLWLLARSR 326 P QLPVGVITALVGVP+FLWLLARSR Sbjct: 302 PTQLPVGVITALVGVPVFLWLLARSR 327 >ref|ZP_08276042.1| ABC-type Fe3+-siderophore transport system permease component [Oxalobacteraceae bacterium IMCC9480] gb|EGF30492.1| ABC-type Fe3+-siderophore transport system permease component [Oxalobacteraceae bacterium IMCC9480] Length = 322 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 197/302 (65%), Positives = 231/302 (76%), Gaps = 9/302 (2%) Query: 25 CGSTGCLRPSASADQVAMLLSLRVPRALTAFAVGGALALSGALMQVLLRNPLADPYVLGL 84 CGSTGC SA ++ +LR+PRAL+AFAVGG LAL+GALMQVLLRNPLADPYVLG+ Sbjct: 29 CGSTGCFAGSAD-----IVWALRLPRALSAFAVGGLLALAGALMQVLLRNPLADPYVLGV 83 Query: 85 SGGSAAGALLAMLAALRLGWPVQAVTAPGALLGAGLAMLLLFGLVRPSLRHLAVSPLLSS 144 SGG+AAGA+ AML A + GAL GA LA LLFGL R +L L+ S +S Sbjct: 84 SGGAAAGAMSAMLLAPAAL--LAWSAHVGALAGALLATGLLFGLARGALLRLSGS--VSG 139 Query: 145 QRLLLTGVMLAAGFGALISLALSIAPDAQLRGMVFWLIGDLDDARLLPLMAPVLLLALLW 204 RL+LTGVM+AAGFGA ++L L++APDA+LRGM+FWL+GDLD+ L LLLA++W Sbjct: 140 IRLILTGVMIAAGFGACMTLILTLAPDARLRGMIFWLMGDLDNNLLYAPACIALLLAVIW 199 Query: 205 SWRHAPSLNLLARGDAFAQLLGVPVMRLRVMLLCVAAACTAGAVAMAGTIGFVGLVVPHG 264 S +A LN+LA GDA AQLLGVPV+RLR + L VA+ TA AVA+AGTIGFVGLVVPH Sbjct: 200 SCANAARLNVLAHGDAAAQLLGVPVLRLRALTLLVASVATAAAVAVAGTIGFVGLVVPHA 259 Query: 265 LRLLVGNDQRLLLPACVLGGGAMLTLADLLARTVAAPVQLPVGVITALVGVPMFLWLLAR 324 LRLL GNDQRLLLPAC LGGG L LADLLART+ AP QLPVGVITALVGVP+FL+LL R Sbjct: 260 LRLLFGNDQRLLLPACALGGGIALVLADLLARTIVAPTQLPVGVITALVGVPVFLFLLQR 319 Query: 325 SR 326 R Sbjct: 320 GR 321 >ref|YP_002513648.1| transporter permease [Thioalkalivibrio sulfidophilus HL-EbGr7] gb|ACL72661.1| transport system permease protein [Thioalkalivibrio sulfidophilus HL-EbGr7] Length = 322 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 161/285 (56%), Positives = 203/285 (71%), Gaps = 12/285 (4%) Query: 42 MLLSLRVPRALTAFAVGGALALSGALMQVLLRNPLADPYVLGLSGGSAAGALLAMLAALR 101 +++ LR+PR L AFA G LA++GALMQVLLRNPLADPYVLG+SGG+A GALL+MLA L Sbjct: 50 LVMELRLPRTLAAFATGALLAVAGALMQVLLRNPLADPYVLGISGGAAVGALLSMLAGL- 108 Query: 102 LGWPVQAVTAPGALLGAGLAMLLLFGLVRPSLRHLAVSPLLSSQRLLLTGVMLAAGFGAL 161 A+ + A GA L+ LL+FGL + S RLLLTGV++AAG+GAL Sbjct: 109 ----ATALVSGAAFAGALLSTLLVFGLAHGTGS-------WSPVRLLLTGVVVAAGWGAL 157 Query: 162 ISLALSIAPDAQLRGMVFWLIGDLDDARLLPLMAPVLLLALLWSWRHAPSLNLLARGDAF 221 IS L+++P A+L GM++WL+GDL AR + VL+L LL +W LN+LARG Sbjct: 158 ISFILAVSPGAELPGMLYWLMGDLSHARNPVMGWGVLVLVLLIAWPLGRHLNVLARGSLQ 217 Query: 222 AQLLGVPVMRLRVMLLCVAAACTAGAVAMAGTIGFVGLVVPHGLRLLVGNDQRLLLPACV 281 A LGV V L + +AA TA AV +AGT+GFVGL+VPH LRL++GNDQR++LPA Sbjct: 218 AAALGVSVRPLEWTVYLLAALLTATAVTLAGTVGFVGLIVPHMLRLVLGNDQRIILPAAA 277 Query: 282 LGGGAMLTLADLLARTVAAPVQLPVGVITALVGVPMFLWLLARSR 326 L GG +LTLAD LARTV AP QLPVGVITA++GVP+FL+LL RSR Sbjct: 278 LAGGILLTLADTLARTVIAPQQLPVGVITAMLGVPVFLYLLHRSR 322 >ref|YP_002006440.1| cobalamin transporter, inner membrane component (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] emb|CAQ70379.1| cobalamin transport system, inner membrane component (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] Length = 335 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 163/286 (56%), Positives = 201/286 (70%), Gaps = 7/286 (2%) Query: 41 AMLLSLRVPRALTAFAVGGALALSGALMQVLLRNPLADPYVLGLSGGSAAGALLAMLAAL 100 A++ LR+PRA AFA GG LALSGALMQVLLRNPLA+PYVLG+SGG++ ALLAMLA Sbjct: 52 AIVHELRLPRAAAAFACGGLLALSGALMQVLLRNPLAEPYVLGVSGGASTAALLAMLALA 111 Query: 101 RLGWPVQAVTAPGALLGAGLAMLLLFGLVRPSLRHLAVSP--LLSSQRLLLTGVMLAAGF 158 W VQA A +GA LAM+L+ L R L H V + RLLLTGV+LAAG+ Sbjct: 112 PW-WGVQAAAA----IGALLAMVLVASLARRDLLHPQVQGGHREAGARLLLTGVILAAGW 166 Query: 159 GALISLALSIAPDAQLRGMVFWLIGDLDDARLLPLMAPVLLLALLWSWRHAPSLNLLARG 218 GA+I+L LS+AP+++LRGM+FWL GDL L+ ALL + A +LN++ G Sbjct: 167 GAVITLILSVAPESRLRGMLFWLTGDLGGTASYGGALATLVAALLLAMPLARALNVMLLG 226 Query: 219 DAFAQLLGVPVMRLRVMLLCVAAACTAGAVAMAGTIGFVGLVVPHGLRLLVGNDQRLLLP 278 + AQ LGV V R+R++ +A+ C A A+ AG+IGFVGLVVPH +RL GNDQRLLLP Sbjct: 227 ETVAQSLGVRVGRVRLVTFMLASLCIAAAITTAGSIGFVGLVVPHLVRLAWGNDQRLLLP 286 Query: 279 ACVLGGGAMLTLADLLARTVAAPVQLPVGVITALVGVPMFLWLLAR 324 A L GGA+L ADL+ARTV AP QLPVGVIT L+GVP FL+LL R Sbjct: 287 AATLLGGALLMAADLIARTVVAPAQLPVGVITGLLGVPTFLYLLLR 332 >ref|YP_727415.1| ABC-type cobalamin transporter, permease component (BtuC) [Ralstonia eutropha H16] emb|CAJ94047.1| ABC-type cobalamin transporter, permease component (BtuC) [Ralstonia eutropha H16] Length = 335 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 163/296 (55%), Positives = 202/296 (68%), Gaps = 7/296 (2%) Query: 31 LRPSASADQVAMLLSLRVPRALTAFAVGGALALSGALMQVLLRNPLADPYVLGLSGGSAA 90 L + + A++ LR+PRA AFA GG LALSGALMQVLLRNPLA+PYVLG+SGG++ Sbjct: 42 LSSADTGTPAAIVRELRLPRAAAAFACGGLLALSGALMQVLLRNPLAEPYVLGVSGGAST 101 Query: 91 GALLAMLAALRLGWPVQAVTAPGALLGAGLAMLLLFGLVRPSLRHLAVSP--LLSSQRLL 148 ALLAML W VQA A GA AM+L+ L R L H V + RLL Sbjct: 102 AALLAMLLLAPW-WGVQAAAA----AGALAAMVLVASLARRDLLHPQVQGGHREAGARLL 156 Query: 149 LTGVMLAAGFGALISLALSIAPDAQLRGMVFWLIGDLDDARLLPLMAPVLLLALLWSWRH 208 LTGV+LAAG+GA+I+L LSIAP+++LRGM+FWL GDL +L++ALL + Sbjct: 157 LTGVILAAGWGAVITLILSIAPESRLRGMLFWLTGDLGGTAAYGGALAMLVVALLLAMPM 216 Query: 209 APSLNLLARGDAFAQLLGVPVMRLRVMLLCVAAACTAGAVAMAGTIGFVGLVVPHGLRLL 268 A +LN++ G+ AQ LGV V R+R+ +A+ C A A+ AG+IGFVGLVVPH +RL Sbjct: 217 ARALNVMLLGETVAQSLGVRVGRVRLATFLLASLCIAAAITTAGSIGFVGLVVPHLVRLA 276 Query: 269 VGNDQRLLLPACVLGGGAMLTLADLLARTVAAPVQLPVGVITALVGVPMFLWLLAR 324 GNDQRLLLPA L GGA+L ADL+ARTV AP QLPVGVIT L+GVP FL+LL R Sbjct: 277 WGNDQRLLLPAATLLGGALLMAADLIARTVVAPAQLPVGVITGLLGVPTFLYLLLR 332