BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3721.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776486.1| hypothetical protein Hsero_3094 [Herbaspiril... 139 2e-31 ref|YP_001354512.1| hypothetical protein mma_2822 [Janthinobacte... 66 3e-09 ref|YP_004537626.1| hypothetical protein Thicy_1385 [Thioalkalim... 64 1e-08 ref|ZP_02061927.1| putative outer membrane protein OmpA [Rickett... 58 7e-07 ref|ZP_02061881.1| hypothetical protein RICGR_0764 [Rickettsiell... 57 2e-06 >ref|YP_003776486.1| hypothetical protein Hsero_3094 [Herbaspirillum seropedicae SmR1] gb|ADJ64578.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 202 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 7/209 (3%) Query: 3 MKVIHLIAATAAFAMSTLGFAQESRPATGIYVGLEGGSVSYAVNDGNDGPSRDEYVESAR 62 MK +H++AA+ +S AQ + G+Y+G+EGG + V D + G + E++ Sbjct: 1 MKKMHMLAASILLVVSAAVSAQSANSDYGVYLGVEGGVGNMDV-DLDAGAA--VLSETSN 57 Query: 63 AGAVRLSVGYQFTPNFSLESGYFHLGDFKREERNAGPYRWHLTANTHGFDLLAIYKLTGF 122 G R ++GY+F NF++E+GYFH G ++ +E+ H +A GFDL IY++T F Sbjct: 58 VGVARAAIGYRFDRNFAVEAGYFHTGAYELKEQVGRGQYDHFSAKAKGFDLALIYRMTQF 117 Query: 123 IPGLYLKGGLMHSQVSLEAAEEGPYAYRRSTSHSQSGIGYQLGIGYEYDLTSRFSINGAY 182 +PGLY+KGGL+HS VS E R S + S+SG GY +G+GYE DL+ S+ Y Sbjct: 118 LPGLYVKGGLIHSTVSGRLDEVQNQRVRESHTFSRSGAGYLMGLGYELDLSRELSLTAGY 177 Query: 183 TRLQRVGGSWEDGVSVNANLLSAGLKYRF 211 TRLQ++ G +N NL SAGL+YRF Sbjct: 178 TRLQQLAGE----SRINLNLFSAGLRYRF 202 >ref|YP_001354512.1| hypothetical protein mma_2822 [Janthinobacterium sp. Marseille] gb|ABR91878.1| Hypothetical protein mma_2822 [Janthinobacterium sp. Marseille] Length = 195 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 17 MSTLGFAQESRPATGIYVGLEGGSVSYAVNDGNDGPSRDEYVESARAGAVRLSVGYQFTP 76 +S + FA E++ A Y+GL+ GS V P+ E+ R RL +GYQ TP Sbjct: 14 VSAVSFADENK-AGKFYLGLDAGSGK--VKKDPLTPNYRITSETDRVDGGRLYIGYQITP 70 Query: 77 NFSLESGYFHLGDFKREERNAGPYRWHLTANTHGFDLLAIYKLTGFIPGLYLKGGLMHSQ 136 S+E G D+K+ N G ++ T DL YK+ +PGL++ GG+ +S+ Sbjct: 71 KLSVELGAVRPSDYKQSATN-GVLSYNARVETKNHDLTLFYKVPELLPGLFVLGGVTYSK 129 Query: 137 VSLEAAEEGPY--AYRRSTSHSQSGIGYQLGIGYEYDLTSRFSINGAYTRLQRVGGSWED 194 V A + R S S ++ + G GYE L Y R Sbjct: 130 VVTSAQFTSVLLPSLRVSGSTRKTDTDFAWGGGYEARLFGNVDGRIMYARY--------- 180 Query: 195 GVSVNANLLSAGLKYRF 211 NL++ GLKYRF Sbjct: 181 ---AGTNLVTVGLKYRF 194 >ref|YP_004537626.1| hypothetical protein Thicy_1385 [Thioalkalimicrobium cyclicum ALM1] gb|AEG32147.1| hypothetical protein Thicy_1385 [Thioalkalimicrobium cyclicum ALM1] Length = 204 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 16/149 (10%) Query: 67 RLSVGYQFTPNFSLESGYFHLGDFKREER----NAGPYRWHLTANTHGFDLLAIYKLTGF 122 R+ VG+ T N +LE+GYF G + R + R + GFD+ A Y F Sbjct: 68 RIHVGHFVTDNLALEAGYFKTGSYDGTYRVLSGDFAGLRLRSSVEVSGFDISANY----F 123 Query: 123 IPGLYLKGGLMHSQVSLEAAEEGPYAYRRSTSHSQSGIGYQLGIGYEYDLTSRFSINGAY 182 Y+KGGL S++ E G S S+ +SG G+ LG GY+ LT + +Y Sbjct: 124 FGDFYIKGGLHSSKIDFEIKAPGGI----SISNDESGTGFLLGAGYQGALTDQVGYRLSY 179 Query: 183 TRLQRVGGSWEDGVSVNANLLSAGLKYRF 211 T + + G + VN+++ +AGL Y+F Sbjct: 180 TYMDSIAGESD----VNSSIFAAGLIYKF 204 >ref|ZP_02061927.1| putative outer membrane protein OmpA [Rickettsiella grylli] gb|EDP45932.1| putative outer membrane protein OmpA [Rickettsiella grylli] Length = 200 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 17/152 (11%) Query: 65 AVRLSVGYQFTPNFSLESGYFHLGDFKREERNAGPYRWHLTANTHGFDLLAIYKLTGFIP 124 A R+++GYQF PN + E GY L D +E + P +T N H FDL+ G +P Sbjct: 60 AGRVAIGYQFNPNLAAEMGYLQLAD--QEAKLKSPVNQSITINQHAFDLVG----KGILP 113 Query: 125 -----GLYLKGGLMHSQVSLEAAEEGPYAYRRSTSHSQSGIGYQLGIGYEYDLTSRFSIN 179 LY K G+ + L ++ + ++ + GIG Y++T I+ Sbjct: 114 LSDKFNLYAKAGVAYLVTDLSGDTINQHSIIKPV--AKQSWAPEAGIGLTYNVTPNMFID 171 Query: 180 GAYTRLQRVGGSWEDGVSVNANLLSAGLKYRF 211 A+T +Q +G + N N+ + GL + F Sbjct: 172 TAFTHIQPIGKNKPS----NINMATIGLGFTF 199 >ref|ZP_02061881.1| hypothetical protein RICGR_0764 [Rickettsiella grylli] gb|EDP45886.1| hypothetical protein RICGR_0764 [Rickettsiella grylli] Length = 206 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 26/215 (12%) Query: 9 IAATAAFAMSTLGFAQESRPATGIYVGLEGGSVSYAVND----GNDGPSRDEYVESARAG 64 + T F +S LG A G+YV G V YA N+ D + ES+ G Sbjct: 5 VLTTTVFGVSALGAMIAHAAAPGVYVT---GQVGYANNNMHLATEDRIDNNNLSESSLGG 61 Query: 65 AVRLSVGYQFTPNFSLESGYFHLGDFKREERNAGPYRW------HLTANTHGFDLLA--I 116 R+++GYQF NF+LE+GYFH K+ G + +L H DL+A I Sbjct: 62 --RVAIGYQFNQNFALETGYFH--SMKKHVTLVGKDKAETLISDNLGLRQHAIDLVAKSI 117 Query: 117 YKLTGFIPGLYLKGGLMHSQVSLEAAEEGPYAYRRSTSHSQSGIGYQLGIGYEYDLTSRF 176 + + L L G L + ++ + ++ S ++ + + IG YD+T Sbjct: 118 FPVN---TNLNLYGKLGVAYLTTDFDKDTFNGRPISNMIAKHKLAPEAAIGVSYDITPNV 174 Query: 177 SINGAYTRLQRVGGSWEDGVSVNANLLSAGLKYRF 211 SI+ ++T +Q +G + N + ++ GL Y F Sbjct: 175 SIDSSWTHIQPIGKNRPG----NIDFVALGLGYNF 205