BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3718.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776484.1| hypothetical protein Hsero_3092 [Herbaspiril... 531 e-149 ref|YP_001099285.1| putative segregation and condensation protei... 430 e-118 ref|YP_004754130.1| segregation and condensation protein A [Coll... 429 e-118 ref|YP_003604336.1| chromosome segregation and condensation prot... 416 e-114 ref|YP_001352796.1| segregation and condensation protein A [Jant... 407 e-111 >ref|YP_003776484.1| hypothetical protein Hsero_3092 [Herbaspirillum seropedicae SmR1] gb|ADJ64576.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 298 Score = 531 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 289/298 (96%), Positives = 294/298 (98%) Query: 1 MTVQAGGTDPAGQPGAEPSADAIDITPAGQQDTTPDVIDGVALARLYGEPLFQLPNDLYI 60 MT QAGG D AGQPGAEPSADAIDITPAGQQD+TPDVIDGVALARLYGEPLFQLPNDLYI Sbjct: 1 MTAQAGGADLAGQPGAEPSADAIDITPAGQQDSTPDVIDGVALARLYGEPLFQLPNDLYI 60 Query: 61 PPDALEVFLEAFQGPLDLLLYLIRKQNFNILDIPLAQVTAQYLEYVEQIRKQNLELAAEY 120 PPDALEVFLEAFQGPLDLLLYLIRKQNFNILDIPLAQVTAQYLEYV+QIRKQNLELAAEY Sbjct: 61 PPDALEVFLEAFQGPLDLLLYLIRKQNFNILDIPLAQVTAQYLEYVDQIRKQNLELAAEY 120 Query: 121 LLMAAMLIEIKSRMLLPAKKAEPGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRD 180 LLMAAMLIEIKSRMLLPAKKAE GEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRD Sbjct: 121 LLMAAMLIEIKSRMLLPAKKAESGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRD 180 Query: 181 YVRTQVHIEQTVVTRWPEVDIDDLKAVWADILKRAKLTQHHHISREELSVREHMTGILRR 240 YVRTQVHIEQTVVTRWPEV++DDLKAVWADIL+RAKLTQHHHISREELSVREHMTGILRR Sbjct: 181 YVRTQVHIEQTVVTRWPEVNMDDLKAVWADILRRAKLTQHHHISREELSVREHMTGILRR 240 Query: 241 LQSARFVEFSDLFDPSRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 LQSARFVEFSDLFDPSRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS Sbjct: 241 LQSARFVEFSDLFDPSRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 >ref|YP_001099285.1| putative segregation and condensation protein A [Herminiimonas arsenicoxydans] emb|CAL61158.1| Conserved hypothetical protein, putative segregation and condensation protein A [Herminiimonas arsenicoxydans] Length = 292 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 227/283 (80%), Positives = 255/283 (90%) Query: 16 AEPSADAIDITPAGQQDTTPDVIDGVALARLYGEPLFQLPNDLYIPPDALEVFLEAFQGP 75 A + A D+ G+ DTTPDVIDGVA ARLYGEPLF++P DLYIPPDALEVFLEAF+GP Sbjct: 10 AHLPSSAPDLVVDGRPDTTPDVIDGVAYARLYGEPLFRMPTDLYIPPDALEVFLEAFEGP 69 Query: 76 LDLLLYLIRKQNFNILDIPLAQVTAQYLEYVEQIRKQNLELAAEYLLMAAMLIEIKSRML 135 LDLLLYLIRKQNFNILDIP+AQVT QYL+YV+QIR NLELAAEYLLMAAMLIEIKSRML Sbjct: 70 LDLLLYLIRKQNFNILDIPMAQVTKQYLQYVDQIRLHNLELAAEYLLMAAMLIEIKSRML 129 Query: 136 LPAKKAEPGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRDYVRTQVHIEQTVVTR 195 LP +KA+ GEE DPRAELVRRLLEYEQ+KLA+Q++D LPQ+GRDYVRTQ++IEQ VTR Sbjct: 130 LPVRKADTGEEAGDPRAELVRRLLEYEQMKLASQQIDALPQLGRDYVRTQIYIEQNTVTR 189 Query: 196 WPEVDIDDLKAVWADILKRAKLTQHHHISREELSVREHMTGILRRLQSARFVEFSDLFDP 255 WPEVDI DL+A WAD++KRAKLT HH ISREELSVREHMT ILRRLQS +FVEF+DLFDP Sbjct: 190 WPEVDIVDLQAAWADLIKRAKLTAHHMISREELSVREHMTSILRRLQSTKFVEFADLFDP 249 Query: 256 SRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 +RGVPV+VVNF+ALLELAKETLIEITQAE FAPIYVRL+Y+PS Sbjct: 250 TRGVPVIVVNFVALLELAKETLIEITQAEPFAPIYVRLAYAPS 292 >ref|YP_004754130.1| segregation and condensation protein A [Collimonas fungivorans Ter331] gb|AEK63307.1| Segregation and condensation protein A [Collimonas fungivorans Ter331] Length = 287 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 227/279 (81%), Positives = 258/279 (92%), Gaps = 1/279 (0%) Query: 20 ADAIDITPAGQQDTTPDVIDGVALARLYGEPLFQLPNDLYIPPDALEVFLEAFQGPLDLL 79 +DA ++T GQ D+TP+VIDGVA ARLYGEPLF++P DLYIPPDALE+FLEAF+GPLDLL Sbjct: 6 SDAAELTLEGQPDSTPNVIDGVAFARLYGEPLFRMPTDLYIPPDALEIFLEAFEGPLDLL 65 Query: 80 LYLIRKQNFNILDIPLAQVTAQYLEYVEQIRKQNLELAAEYLLMAAMLIEIKSRMLLPAK 139 LYLIRKQNFNILDIP+AQVT QYLEYV+QIR NLELAAEYLLMAAMLIEIKSRMLLP + Sbjct: 66 LYLIRKQNFNILDIPMAQVTLQYLEYVDQIRITNLELAAEYLLMAAMLIEIKSRMLLPVR 125 Query: 140 KAEPGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRDYVRTQVHIEQTVVTRWPEV 199 K + EE EDPRAELVRRLLEYEQ+KLAA+E+D LPQ+GRDYVRTQ++IEQ VTRWP+V Sbjct: 126 KTD-SEEAEDPRAELVRRLLEYEQMKLAAREIDALPQLGRDYVRTQIYIEQNTVTRWPDV 184 Query: 200 DIDDLKAVWADILKRAKLTQHHHISREELSVREHMTGILRRLQSARFVEFSDLFDPSRGV 259 ++DDL+A WAD++KRAKLT HH ISREELSVREHMTGILRRLQSARFVEF++LFDPSRGV Sbjct: 185 NLDDLQAAWADVIKRAKLTAHHTISREELSVREHMTGILRRLQSARFVEFAELFDPSRGV 244 Query: 260 PVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 PV+VVNFIA+LELAKETLIEITQAE FAPIYVRL+YSP+ Sbjct: 245 PVLVVNFIAMLELAKETLIEITQAEPFAPIYVRLAYSPT 283 >ref|YP_003604336.1| chromosome segregation and condensation protein ScpA [Burkholderia sp. CCGE1002] gb|ADG14825.1| chromosome segregation and condensation protein ScpA [Burkholderia sp. CCGE1002] Length = 303 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 221/289 (76%), Positives = 254/289 (87%), Gaps = 3/289 (1%) Query: 10 PAGQPGAEPSADAIDITPAGQQDTTPDVIDGVALARLYGEPLFQLPNDLYIPPDALEVFL 69 P P PS A+ TPA D+TPD +DGVA ARLYGEPLF+LPNDLYIPPDALEVFL Sbjct: 18 PFHGPAPAPSDTALS-TPA--TDSTPDTVDGVAFARLYGEPLFKLPNDLYIPPDALEVFL 74 Query: 70 EAFQGPLDLLLYLIRKQNFNILDIPLAQVTAQYLEYVEQIRKQNLELAAEYLLMAAMLIE 129 E F+GPLDLLLYLIRKQNFN+LDIP+A VTAQYL YVEQ+RK NLELA+EYLLMAAMLIE Sbjct: 75 ETFEGPLDLLLYLIRKQNFNVLDIPMADVTAQYLGYVEQLRKTNLELASEYLLMAAMLIE 134 Query: 130 IKSRMLLPAKKAEPGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRDYVRTQVHIE 189 IKSRMLLP KKA+ GEE EDPRAELVRRLLEYEQIKLAAQ +DQLPQ+GRD++R +V+IE Sbjct: 135 IKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQIKLAAQRIDQLPQLGRDFLRAEVYIE 194 Query: 190 QTVVTRWPEVDIDDLKAVWADILKRAKLTQHHHISREELSVREHMTGILRRLQSARFVEF 249 Q+V R+P+V+ DDL+A WAD++KRAKL QHH ISREELSVREHM+ ILR+LQ+ARF+EF Sbjct: 195 QSVTPRFPDVNSDDLRAAWADVIKRAKLVQHHKISREELSVREHMSLILRQLQNARFIEF 254 Query: 250 SDLFDPSRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 SDLFD SRGVPVVVVNFIA+LEL +E+L+EITQAE FAPIYVRL+Y P+ Sbjct: 255 SDLFDTSRGVPVVVVNFIAVLELCRESLVEITQAEPFAPIYVRLAYLPA 303 >ref|YP_001352796.1| segregation and condensation protein A [Janthinobacterium sp. Marseille] gb|ABR89896.1| Segregation and condensation protein A [Janthinobacterium sp. Marseille] Length = 292 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 227/283 (80%), Positives = 256/283 (90%) Query: 16 AEPSADAIDITPAGQQDTTPDVIDGVALARLYGEPLFQLPNDLYIPPDALEVFLEAFQGP 75 A + A D+ G+ DTTPDVIDGVA ARLYGEPLF++P DLYIPPDALEVFLEAF+GP Sbjct: 10 AHLPSSAPDLVVEGRPDTTPDVIDGVAYARLYGEPLFRMPTDLYIPPDALEVFLEAFEGP 69 Query: 76 LDLLLYLIRKQNFNILDIPLAQVTAQYLEYVEQIRKQNLELAAEYLLMAAMLIEIKSRML 135 LDLLLYLIRKQNFNILDIP+AQVT QYL+YV+QIR NLELAAEYLLMAAMLIEIKSRML Sbjct: 70 LDLLLYLIRKQNFNILDIPMAQVTKQYLQYVDQIRLHNLELAAEYLLMAAMLIEIKSRML 129 Query: 136 LPAKKAEPGEEPEDPRAELVRRLLEYEQIKLAAQELDQLPQVGRDYVRTQVHIEQTVVTR 195 LP +KA+ GEE DPRAELVRRLLEYEQ+KLA+Q++D LPQ+GRDYVRTQ++IEQ++VTR Sbjct: 130 LPVRKADTGEEAADPRAELVRRLLEYEQMKLASQQIDALPQLGRDYVRTQIYIEQSIVTR 189 Query: 196 WPEVDIDDLKAVWADILKRAKLTQHHHISREELSVREHMTGILRRLQSARFVEFSDLFDP 255 WPEV++ DL+ WAD+LKRAKLT HH ISREELSVREHMT ILRRLQS +FVEF+DLFDP Sbjct: 190 WPEVEVVDLQQAWADLLKRAKLTAHHMISREELSVREHMTAILRRLQSTKFVEFADLFDP 249 Query: 256 SRGVPVVVVNFIALLELAKETLIEITQAEAFAPIYVRLSYSPS 298 SRGVPVVVVNF+ALLELAKETLIEITQAE FAPIYVRL+Y+PS Sbjct: 250 SRGVPVVVVNFVALLELAKETLIEITQAEPFAPIYVRLAYAPS 292