BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3716.p (175 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776482.1| lipoprotein [Herbaspirillum seropedicae SmR1... 322 2e-86 ref|YP_004754128.1| hypothetical protein CFU_3481 [Collimonas fu... 194 6e-48 ref|YP_001099287.1| hypothetical protein HEAR0977 [Herminiimonas... 178 2e-43 ref|YP_001352798.1| hypothetical protein mma_1108 [Janthinobacte... 171 3e-41 ref|YP_001807763.1| hypothetical protein BamMC406_1056 [Burkhold... 120 7e-26 >ref|YP_003776482.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ64574.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 175 Score = 322 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 153/175 (87%), Positives = 161/175 (92%) Query: 1 MREPIFTRLRRHAGHFGALLVALAMFGCDRNGNPIEEFGLDKLQKGVSSEADVRGVMGQP 60 M +P FTRLRRHAG FGA LVALAM GCDRNG PIEEFGLDKLQKG+SSEADVR VMGQP Sbjct: 1 MTDPFFTRLRRHAGKFGAFLVALAMLGCDRNGKPIEEFGLDKLQKGISSEADVRDVMGQP 60 Query: 61 DTVWEDGGGAKTLEYPKGPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTEQIR 120 DTVW+DG GA+TLEYPKGP+GIRTWMF IGASGTLIDY QVLTQEHFDTIR GM+ EQIR Sbjct: 61 DTVWDDGQGARTLEYPKGPQGIRTWMFSIGASGTLIDYQQVLTQEHFDTIRAGMTAEQIR 120 Query: 121 REFGRPRSVVQFARKNEEVWDWKYHYVHEDRLFNVHFDITTKQVVRTSISEISGH 175 R+FGRPRSVVQF RKNEEVWDWKYHYVHEDRLFNVHFD+ TKQVVRTSISEISGH Sbjct: 121 RQFGRPRSVVQFGRKNEEVWDWKYHYVHEDRLFNVHFDMNTKQVVRTSISEISGH 175 >ref|YP_004754128.1| hypothetical protein CFU_3481 [Collimonas fungivorans Ter331] gb|AEK63305.1| hypothetical protein CFU_3481 [Collimonas fungivorans Ter331] Length = 185 Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 91/159 (57%), Positives = 116/159 (72%), Gaps = 1/159 (0%) Query: 18 ALLVALAMFGCDRNGNPIEEFGLDKLQKGVSSEADVRGVMGQPDTVWEDGGGAKTLEYPK 77 A+++ + CD+NGN I+E GL+KL +GVS+EADVR MGQPDTVWE G ++LEYPK Sbjct: 27 AVVLPFMIAACDQNGNFIQEAGLEKLSRGVSTEADVRNAMGQPDTVWEAESGERSLEYPK 86 Query: 78 GPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTEQIRREFGRPRSVVQFARKNE 137 GP G RTW+F IG G L DY QVLT+E+F I+ GM+ E++RR GRPR+VVQF RKNE Sbjct: 87 GPSGARTWIFYIGKDGKLSDYKQVLTEENFARIKVGMNKEEVRRMLGRPRTVVQFTRKNE 146 Query: 138 EVWDWKYHYVHEDR-LFNVHFDITTKQVVRTSISEISGH 175 EVWDW+Y + FNVH DIT+ V TS+S++ GH Sbjct: 147 EVWDWRYTQADASQAFFNVHMDITSGLVTGTSVSQVYGH 185 >ref|YP_001099287.1| hypothetical protein HEAR0977 [Herminiimonas arsenicoxydans] emb|CAL61160.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 166 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 3/155 (1%) Query: 18 ALLVALAMFGCDRNGNPIEEFGLDKLQKGVSSEADVRGVMGQPDTVWEDGGGAKTLEYPK 77 + L MFGC NG IE+FGL+KL KGVSSEADVR MG+P+TV ++ GA+TLEYPK Sbjct: 10 GFVCGLLMFGC--NGRAIEDFGLEKLIKGVSSEADVRSAMGEPETVRDEENGARTLEYPK 67 Query: 78 GPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTEQIRREFGRPRSVVQFARKNE 137 GP G RT+M + A G YTQVLT E+F TI GMS +Q+RR+ G+PR+VV+F KNE Sbjct: 68 GPSGHRTFMINLDAQGVFQAYTQVLTPENFATIEAGMSRDQVRRKLGKPRTVVKFGLKNE 127 Query: 138 EVWDWKY-HYVHEDRLFNVHFDITTKQVVRTSISE 171 EVWDW+Y +R FNVHFDI + +V RTS+S+ Sbjct: 128 EVWDWRYLEGPVTERFFNVHFDIDSGKVTRTSVSD 162 >ref|YP_001352798.1| hypothetical protein mma_1108 [Janthinobacterium sp. Marseille] gb|ABR90631.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 159 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 88/164 (53%), Positives = 116/164 (70%), Gaps = 10/164 (6%) Query: 9 LRRHAGHFGALLVALAMFGCDRNGNPIEEFGLDKLQKGVSSEADVRGVMGQPDTVWEDGG 68 +R G F +LL M GC ++ EFGL+KL KGVS+EADVR MG+P+ VWE+ Sbjct: 1 MRTLLGFFCSLL----MLGCQQS-----EFGLEKLTKGVSTEADVRSAMGEPEIVWEEHN 51 Query: 69 GAKTLEYPKGPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTEQIRREFGRPRS 128 G++TLEYPKGP G RT+M I A G L DYTQVLT ++F TI+ GM+ E++RR+ G+PR+ Sbjct: 52 GSRTLEYPKGPAGHRTYMVDIDAQGKLRDYTQVLTNDNFATIKVGMTREEVRRKLGKPRT 111 Query: 129 VVQFARKNEEVWDWKY-HYVHEDRLFNVHFDITTKQVVRTSISE 171 V +F KNEEVWDW+Y +R FNVHFD+ T +V RTS+S+ Sbjct: 112 VGKFNLKNEEVWDWRYLEGPSIERFFNVHFDLETGKVTRTSVSD 155 >ref|YP_001807763.1| hypothetical protein BamMC406_1056 [Burkholderia ambifaria MC40-6] gb|ACB63547.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6] Length = 185 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 16/155 (10%) Query: 19 LLVALAMFGCD-RNGN----PIEEFG---------LDKLQKGVSSEADVRGVMGQPDTVW 64 L ALA+ GCD + GN I +F L L+ GVS+EADVRG MG+PDT Sbjct: 13 LAAALALTGCDDKQGNLDVQRIRDFFNAIKPAPLLLKGLKVGVSTEADVRGTMGKPDTER 72 Query: 65 EDGGGAKTLEYPKGPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTEQIRREFG 124 G+K LEYP+GP G +TW + ASG TQVLT E+F +RPGM +++RR G Sbjct: 73 TFTDGSKRLEYPRGPMGNQTWFVDLDASGHYAGATQVLTAENFAKVRPGMDEDEVRRLLG 132 Query: 125 RPRSVVQFARKNEEVWDWKY--HYVHEDRLFNVHF 157 +P + Q+ K E VW W++ V+ D FNVHF Sbjct: 133 KPGDIAQYPLKPETVWSWRWLEDGVNTDAFFNVHF 167