BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3715.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776481.1| sugar ABC transporter permease [Herbaspirill... 414 e-113 ref|ZP_06685251.1| ABC superfamily ATP binding cassette transpor... 384 e-105 ref|YP_003976208.1| binding-protein-dependent transporter inner ... 382 e-104 gb|EFV84753.1| glycerol-3-phosphat transport system [Achromobact... 382 e-104 ref|YP_004418220.1| glycerol-3-phosphat transport system, permea... 372 e-101 >ref|YP_003776481.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64573.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 276 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 269/276 (97%), Positives = 272/276 (98%) Query: 1 MIAPTSPFAERHRALETVSAWVLALLWLLPLLYALWTAFHPAAYATRLVLDAPLTLQNFA 60 MIAPTSPFA+RHRALETVSAWVLALLWLLPLLYALWTAFHPAA+ATR LDAPLTLQNF Sbjct: 1 MIAPTSPFADRHRALETVSAWVLALLWLLPLLYALWTAFHPAAFATRFTLDAPLTLQNFV 60 Query: 61 NAWHAAPFPRYFLNTFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMP 120 NAW AAPFPRYFLNTFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMP Sbjct: 61 NAWQAAPFPRYFLNTFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMP 120 Query: 121 DILIVENYQTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAW 180 DILIVENYQTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAW Sbjct: 121 DILIVENYQTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAW 180 Query: 181 QILMQVYVPLAKPIYIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVD 240 QILMQVYVPLA+PIYIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVD Sbjct: 181 QILMQVYVPLARPIYIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVD 240 Query: 241 WSIITAATLMTSAPLLLAFLLFQRQFVQSFMRAGIR 276 WSIITAATLMTSAPLLLAFLLFQRQFVQSFMRAGIR Sbjct: 241 WSIITAATLMTSAPLLLAFLLFQRQFVQSFMRAGIR 276 >ref|ZP_06685251.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gb|EFF77868.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 266 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 212/262 (80%), Positives = 240/262 (91%) Query: 15 LETVSAWVLALLWLLPLLYALWTAFHPAAYATRLVLDAPLTLQNFANAWHAAPFPRYFLN 74 L+T+ AW L LLW+LPL YA+W AFHP AYATR L APLTL NFA AW AAPFPRYFLN Sbjct: 5 LDTLGAWALGLLWILPLAYAMWAAFHPPAYATRFELFAPLTLDNFARAWQAAPFPRYFLN 64 Query: 75 TFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMPDILIVENYQTMNLL 134 TFLLVTM+LAAQLVL+TLA YAFARF FRG + +FMLVLLQLM+MPD+L+VENY++M+ L Sbjct: 65 TFLLVTMVLAAQLVLSTLAGYAFARFEFRGRDFVFMLVLLQLMIMPDVLLVENYRSMSQL 124 Query: 135 GLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAWQILMQVYVPLAKPI 194 G+RDT+ +IGLPYFASAFGIFLLRQTFKTVPREL+EAA +EGASA QIL +VYVPLAKPI Sbjct: 125 GIRDTVFAIGLPYFASAFGIFLLRQTFKTVPRELEEAARMEGASAMQILWKVYVPLAKPI 184 Query: 195 YIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVDWSIITAATLMTSAP 254 Y+A+GLVSVS HWNNFLWPLI+TNSVESRPLTVGLQVFSSTDQG+DWS+ITAATLM++AP Sbjct: 185 YVAYGLVSVSHHWNNFLWPLIITNSVESRPLTVGLQVFSSTDQGIDWSVITAATLMSAAP 244 Query: 255 LLLAFLLFQRQFVQSFMRAGIR 276 LL+AFLLFQRQFVQSFMRAGIR Sbjct: 245 LLIAFLLFQRQFVQSFMRAGIR 266 >ref|YP_003976208.1| binding-protein-dependent transporter inner membrane component family protein 2 [Achromobacter xylosoxidans A8] gb|ADP13493.1| binding-protein-dependent transport system inner membrane component family protein 2 [Achromobacter xylosoxidans A8] Length = 266 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 209/262 (79%), Positives = 240/262 (91%) Query: 15 LETVSAWVLALLWLLPLLYALWTAFHPAAYATRLVLDAPLTLQNFANAWHAAPFPRYFLN 74 L+T+ AW L LLW+LPL YA+W AFHP AYATR L APLTL NF AW+AAPFPRYFLN Sbjct: 5 LDTLGAWALGLLWILPLAYAMWAAFHPPAYATRFDLFAPLTLDNFVRAWNAAPFPRYFLN 64 Query: 75 TFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMPDILIVENYQTMNLL 134 TFLLVTM+LAAQLVL+TLA YAFARF FRG + +FMLVLLQLM+MPD+L+VENY++M+ L Sbjct: 65 TFLLVTMVLAAQLVLSTLAGYAFARFEFRGRDFVFMLVLLQLMIMPDVLLVENYRSMSQL 124 Query: 135 GLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAWQILMQVYVPLAKPI 194 G+RDT+ +IGLPYFASAFGIFLLRQTFKTVPREL+EAA +EGA+A Q+L +VYVPLAKPI Sbjct: 125 GIRDTVFAIGLPYFASAFGIFLLRQTFKTVPRELEEAARMEGANALQVLWKVYVPLAKPI 184 Query: 195 YIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVDWSIITAATLMTSAP 254 Y+A+GLVSVS HWNNFLWPLI+TNSVESRPLTVGLQVFSSTDQG+DWS+ITAATLM++AP Sbjct: 185 YVAYGLVSVSHHWNNFLWPLIITNSVESRPLTVGLQVFSSTDQGIDWSVITAATLMSAAP 244 Query: 255 LLLAFLLFQRQFVQSFMRAGIR 276 LL+AFLLFQRQFVQSFMRAGIR Sbjct: 245 LLIAFLLFQRQFVQSFMRAGIR 266 >gb|EFV84753.1| glycerol-3-phosphat transport system [Achromobacter xylosoxidans C54] gb|EGP46435.1| binding-protein-dependent transport system inner membrane component family protein 2 [Achromobacter xylosoxidans AXX-A] Length = 266 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 209/262 (79%), Positives = 239/262 (91%) Query: 15 LETVSAWVLALLWLLPLLYALWTAFHPAAYATRLVLDAPLTLQNFANAWHAAPFPRYFLN 74 L+T+ AW L LLW+LPL YA+W AFHP AYATR L APLTL NFA AW AAPFPRYF N Sbjct: 5 LDTLGAWALGLLWILPLAYAVWAAFHPPAYATRFDLFAPLTLDNFARAWQAAPFPRYFAN 64 Query: 75 TFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMPDILIVENYQTMNLL 134 TFLLVTM+LAAQLVL+TLA YAFARF FRG + +FMLVLLQLM+MPD+L+VENY++M+ L Sbjct: 65 TFLLVTMVLAAQLVLSTLAGYAFARFEFRGRDFVFMLVLLQLMIMPDVLLVENYRSMSQL 124 Query: 135 GLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAWQILMQVYVPLAKPI 194 G+RDT+ +IGLPYFASAFGIFLLRQTFKTVPREL+EAA +EGA+A Q+L +VYVPLAKPI Sbjct: 125 GIRDTVFAIGLPYFASAFGIFLLRQTFKTVPRELEEAARMEGANALQVLWKVYVPLAKPI 184 Query: 195 YIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVDWSIITAATLMTSAP 254 Y+A+GLVSVS HWNNFLWPLI+TNSVESRPLTVGLQVFSSTDQG+DWS+ITAATLM++AP Sbjct: 185 YVAYGLVSVSHHWNNFLWPLIITNSVESRPLTVGLQVFSSTDQGIDWSVITAATLMSAAP 244 Query: 255 LLLAFLLFQRQFVQSFMRAGIR 276 LL+AFLLFQRQFVQSFMRAGIR Sbjct: 245 LLIAFLLFQRQFVQSFMRAGIR 266 >ref|YP_004418220.1| glycerol-3-phosphat transport system, permease component [Pusillimonas sp. T7-7] gb|AEC21596.1| glycerol-3-phosphat transport system, permease component [Pusillimonas sp. T7-7] Length = 266 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 206/264 (78%), Positives = 242/264 (91%) Query: 13 RALETVSAWVLALLWLLPLLYALWTAFHPAAYATRLVLDAPLTLQNFANAWHAAPFPRYF 72 + L+T+ AW+L +LW LPL Y LW AFHP+AY+T+ L APLTL NF AW AAPF +YF Sbjct: 3 QKLDTLGAWLLGILWFLPLAYTLWAAFHPSAYSTQFDLTAPLTLDNFTAAWSAAPFAQYF 62 Query: 73 LNTFLLVTMILAAQLVLATLAAYAFARFTFRGSNVMFMLVLLQLMVMPDILIVENYQTMN 132 LNTF+LVTM+LAAQLVL+TLAAY+FARFTF+G +++FMLVLLQLM+MPD+LIVENY+ M+ Sbjct: 63 LNTFILVTMVLAAQLVLSTLAAYSFARFTFKGRDLVFMLVLLQLMIMPDVLIVENYRLMS 122 Query: 133 LLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAWQILMQVYVPLAK 192 LG+RDTI ++GLPYFASAFGIFLLRQTFKTVPREL+EAA VEGAS WQILM+VYVPLA+ Sbjct: 123 WLGVRDTIFAVGLPYFASAFGIFLLRQTFKTVPRELEEAARVEGASRWQILMKVYVPLAR 182 Query: 193 PIYIAFGLVSVSTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVDWSIITAATLMTS 252 PIY+A+GLVSVS HWNNFLWPLI+TNSVESRPLTVGLQVF+STDQG+DWSIITAATL+++ Sbjct: 183 PIYVAYGLVSVSYHWNNFLWPLIITNSVESRPLTVGLQVFASTDQGIDWSIITAATLLSA 242 Query: 253 APLLLAFLLFQRQFVQSFMRAGIR 276 APLL+AFLLFQRQFVQSFMRAGIR Sbjct: 243 APLLVAFLLFQRQFVQSFMRAGIR 266