BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3714.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776480.1| sugar ABC transporter permease [Herbaspirill... 464 e-129 ref|YP_001628675.1| glycerol-3-phosphat transport system, permea... 370 e-100 ref|YP_003976209.1| binding-protein-dependent transporter inner ... 369 e-100 ref|ZP_06685252.1| ABC superfamily ATP binding cassette transpor... 369 e-100 gb|EFV84754.1| glycerol-3-phosphat transport system [Achromobact... 367 e-100 >ref|YP_003776480.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64572.1| ABC-type sugar transport systems, permease component protein [Herbaspirillum seropedicae SmR1] Length = 291 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 288/291 (98%), Positives = 290/291 (99%) Query: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGGRPSVYVGLENYRLMAE 60 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKG RPSV+VGLENYRLMA+ Sbjct: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGVRPSVFVGLENYRLMAD 60 Query: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN Sbjct: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 Query: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ Sbjct: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 Query: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN Sbjct: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 Query: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ Sbjct: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 >ref|YP_001628675.1| glycerol-3-phosphat transport system, permease component [Bordetella petrii DSM 12804] emb|CAP40404.1| Glycerol-3-phosphat transport system, permease component [Bordetella petrii] Length = 291 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 221/291 (75%), Positives = 249/291 (85%) Query: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGGRPSVYVGLENYRLMAE 60 M R +V WLLL PA+VLL AFTHYPALATLWHSFFSTP+G RP+ +VGLENY +M + Sbjct: 1 MNRSLQAVYGWLLLLPALVLLAAFTHYPALATLWHSFFSTPRGSRPARFVGLENYAVMGD 60 Query: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 DPVFWQAL NNLWFALGTIPL+IA+A++MALWVN LAGRG LR+AYFTPTVLPM+AVAN Sbjct: 61 DPVFWQALWNNLWFALGTIPLSIAIALVMALWVNRNLAGRGFLRMAYFTPTVLPMVAVAN 120 Query: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 IWLFFYTPQYGL+ Q+ G NWLG T L ALMVV +WKEAGFFMIFYLAALQ Sbjct: 121 IWLFFYTPQYGLIAQVMHWFGAAGPNWLGTRDTALPALMVVTIWKEAGFFMIFYLAALQT 180 Query: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 +SP L EAA LEGASRWQYF RV +PLLMPTTLFVL+NALINAFRLVDH+VVMT+GGPDN Sbjct: 181 VSPSLREAALLEGASRWQYFRRVLWPLLMPTTLFVLVNALINAFRLVDHVVVMTRGGPDN 240 Query: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 AS+LLL+YIY+VGF+FWD+SYAA LTVVLL +L + ALVKFR LDRRTHYQ Sbjct: 241 ASTLLLFYIYQVGFSFWDTSYAATLTVVLLLILAITALVKFRWLDRRTHYQ 291 >ref|YP_003976209.1| binding-protein-dependent transporter inner membrane component family protein 3 [Achromobacter xylosoxidans A8] gb|ADP13494.1| binding-protein-dependent transport system inner membrane component family protein 3 [Achromobacter xylosoxidans A8] Length = 291 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 217/291 (74%), Positives = 251/291 (86%) Query: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGGRPSVYVGLENYRLMAE 60 M R +++ WLLL PA+VLL AFTHYPA+ATLWHSFFSTPKG RP+ +VGL+NY +M + Sbjct: 1 MSRSLNALYGWLLLLPAIVLLAAFTHYPAVATLWHSFFSTPKGARPARFVGLDNYAVMRD 60 Query: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 DPVFWQ+L NNLWFALGTIP +I +A++MALWVN L+GRG LR+AYFTPTVLPM+AVAN Sbjct: 61 DPVFWQSLWNNLWFALGTIPTSIGIALIMALWVNRNLSGRGFLRMAYFTPTVLPMVAVAN 120 Query: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 IWLFFYTPQYGL+ Q+ G P NWLGN +T L ALM+V VWKEAGFFMIFYLAALQ Sbjct: 121 IWLFFYTPQYGLIAQVMQLFGSPGPNWLGNRETALPALMLVTVWKEAGFFMIFYLAALQT 180 Query: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 +SP L EAA LEGASRWQYF R+ +PLLMPTTLFVLINALINAFRLVDH+VVMT+GGPDN Sbjct: 181 VSPSLREAAMLEGASRWQYFRRILWPLLMPTTLFVLINALINAFRLVDHVVVMTRGGPDN 240 Query: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 AS+LLLYYIY+VGF+FWD++YAA LTVVLL +L L AL+KFR LDRRTHYQ Sbjct: 241 ASTLLLYYIYQVGFSFWDTAYAATLTVVLLVVLALTALIKFRWLDRRTHYQ 291 >ref|ZP_06685252.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gb|EFF77869.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 291 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 219/291 (75%), Positives = 249/291 (85%) Query: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGGRPSVYVGLENYRLMAE 60 M R ++ WLLL PA+VLL AFTHYPALATLWHSFFSTPKG RP+ +VGLENY +M + Sbjct: 1 MSRSLHALYGWLLLLPAIVLLAAFTHYPALATLWHSFFSTPKGARPARFVGLENYAVMRD 60 Query: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 DPVFWQ+L NNLWFALGTIP +I +A++MALWVN L GRG LR+AYFTPTVLPM+AVAN Sbjct: 61 DPVFWQSLWNNLWFALGTIPTSIGIALIMALWVNRNLRGRGFLRMAYFTPTVLPMVAVAN 120 Query: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 IWLFFYTPQYGL+ Q+ G G P NWLGN +T L ALM+V VWKE+GFFMIFYLAALQ Sbjct: 121 IWLFFYTPQYGLIAQVMGWFGSPGPNWLGNRETALPALMLVTVWKESGFFMIFYLAALQT 180 Query: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 +SP L EAA LEGASRWQYF R+ +PLLMPTTLFVLINALINAFRLVDH+VVMT+GGPDN Sbjct: 181 VSPSLREAAMLEGASRWQYFRRILWPLLMPTTLFVLINALINAFRLVDHVVVMTRGGPDN 240 Query: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 AS+LLLYYIY+VGF+FWD++YAA LTVVLL +L L AL KFR LDRRTHYQ Sbjct: 241 ASTLLLYYIYQVGFSFWDTAYAATLTVVLLVVLALTALFKFRWLDRRTHYQ 291 >gb|EFV84754.1| glycerol-3-phosphat transport system [Achromobacter xylosoxidans C54] Length = 291 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 219/291 (75%), Positives = 250/291 (85%) Query: 1 MKRLPSSVLPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGGRPSVYVGLENYRLMAE 60 M R +++ WLLL PA+VLL AFTHYPALATLWHSFFSTPKG RP+ +VGL+NY +M + Sbjct: 1 MSRSLNALYGWLLLLPAIVLLAAFTHYPALATLWHSFFSTPKGARPARFVGLDNYAVMRD 60 Query: 61 DPVFWQALCNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVAN 120 DPVFWQ+L NNLWFALGTIP +I +A++MALWVN L GRG LR+AYFTPTVLPM+AVAN Sbjct: 61 DPVFWQSLWNNLWFALGTIPTSIGIALVMALWVNRNLRGRGFLRMAYFTPTVLPMVAVAN 120 Query: 121 IWLFFYTPQYGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQ 180 IWLFFYTPQYGL+ Q+ G P NWLGN +T L ALM+V VWKE+GFFMIFYLAALQ Sbjct: 121 IWLFFYTPQYGLIAQVMQLFGSPGPNWLGNRETALPALMLVTVWKESGFFMIFYLAALQT 180 Query: 181 ISPVLAEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIVVMTKGGPDN 240 +SP L EAA LEGASRWQYF RV +PLLMPTTLFVLINALINAFRLVDH+VVMT+GGPDN Sbjct: 181 VSPSLREAAMLEGASRWQYFRRVLWPLLMPTTLFVLINALINAFRLVDHVVVMTRGGPDN 240 Query: 241 ASSLLLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHYQ 291 AS+LLLYYIY+VGF+FWD++YAA LTVVLL +L L ALVKFR LDRRTHYQ Sbjct: 241 ASTLLLYYIYQVGFSFWDTAYAATLTVVLLVVLALTALVKFRWLDRRTHYQ 291