BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3705.p (471 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776473.1| glutamyl-tRNA synthetase [Herbaspirillum ser... 905 0.0 ref|YP_004754122.1| glutamyl-tRNA synthetase [Collimonas fungivo... 822 0.0 ref|YP_001352803.1| glutamyl-tRNA synthetase [Janthinobacterium ... 806 0.0 ref|YP_001099291.1| glutamyl-tRNA synthetase [Herminiimonas arse... 790 0.0 ref|ZP_08276270.1| Glutamyl-tRNA synthetase [Oxalobacteraceae ba... 764 0.0 >ref|YP_003776473.1| glutamyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64565.1| glutamyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 482 Score = 905 bits (2338), Expect = 0.0, Method: Composition-based stats. Identities = 440/470 (93%), Positives = 452/470 (96%) Query: 1 MTSTVPATPVRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFILRIEDTDVERSTPEA 60 + + + AT VRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTF+LRIEDTDVERSTPEA Sbjct: 13 LLAIMTATQVRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFVLRIEDTDVERSTPEA 72 Query: 61 VQAIIEGMQWLGLEHDEGPFYQMKRMDRYREVIGQMLEQGTAYYCYCTPEEVEAMRERQR 120 VQAIIEGMQWLGLEHDEGPFYQMKRMDRYREVI QMLEQGTAYYCYCTPEEVEAMRERQR Sbjct: 73 VQAIIEGMQWLGLEHDEGPFYQMKRMDRYREVIAQMLEQGTAYYCYCTPEEVEAMRERQR 132 Query: 121 AAGEKPRYDGTWRPEAGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDD 180 AAGEKPRYDGTWRPE GKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDD Sbjct: 133 AAGEKPRYDGTWRPEPGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDD 192 Query: 181 LVIARPDGTPTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPM 240 LVIARPDGTPTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPM Sbjct: 193 LVIARPDGTPTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPM 252 Query: 241 ILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSMEQFCGWFDLD 300 ILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSM+QFC WFDLD Sbjct: 253 ILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSMQQFCAWFDLD 312 Query: 301 HLSKSPAQFNPEKLNWLNNHYIKLADNARLATLARPLLEKEGAQFDGAPPLAQTIALLKD 360 HL+K+PAQFNPEKLNWLNNHYIKLADNARLA L RPLLE +GA F+GAP LA IALLKD Sbjct: 313 HLTKAPAQFNPEKLNWLNNHYIKLADNARLAGLVRPLLEAQGAVFEGAPDLAAVIALLKD 372 Query: 361 RANTVNEIAAAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWSKEAIAPMIK 420 RANTVNEIAAAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEW+KEAIAPMIK Sbjct: 373 RANTVNEIAAAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWTKEAIAPMIK 432 Query: 421 EVLAAHGIKMPQLAMPLRLIVAGQLQTPAIDAVLELFGRDVVLARLQNYL 470 EVLAAHGIKMPQLAMPLRLIVAGQLQTPAIDAVL+LFGR+ V ARL YL Sbjct: 433 EVLAAHGIKMPQLAMPLRLIVAGQLQTPAIDAVLQLFGREAVQARLSGYL 482 >ref|YP_004754122.1| glutamyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK63299.1| Glutamyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 480 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 392/479 (81%), Positives = 435/479 (90%), Gaps = 9/479 (1%) Query: 1 MTSTVPAT---------PVRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFILRIEDT 51 MT++ PA+ PVRTRFAPSPTGYLHLGGARTALFSWAYAR FGGTF+LRIEDT Sbjct: 1 MTASTPASNSSLKPALKPVRTRFAPSPTGYLHLGGARTALFSWAYARHFGGTFVLRIEDT 60 Query: 52 DVERSTPEAVQAIIEGMQWLGLEHDEGPFYQMKRMDRYREVIGQMLEQGTAYYCYCTPEE 111 D+ERSTPEAVQAII+GMQWLGLEHDEGPFYQM+RMDRYREVIGQML+QGTAY+CY +PEE Sbjct: 61 DLERSTPEAVQAIIDGMQWLGLEHDEGPFYQMRRMDRYREVIGQMLQQGTAYHCYSSPEE 120 Query: 112 VEAMRERQRAAGEKPRYDGTWRPEAGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPI 171 VEAMRER RAAGEKPRYDGTWRPEAGKTLP +P RKPVVRFKNP DG+VSW+DVVKG I Sbjct: 121 VEAMRERMRAAGEKPRYDGTWRPEAGKTLPPVPADRKPVVRFKNPLDGDVSWDDVVKGNI 180 Query: 172 TISNRELDDLVIARPDGTPTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGT 231 TISNRE+DDLVIARPDGTPTYNFCVVVDDWDM+ITHVIRGDDHVNNTPRQINILKALG Sbjct: 181 TISNREMDDLVIARPDGTPTYNFCVVVDDWDMQITHVIRGDDHVNNTPRQINILKALGAE 240 Query: 232 LPEYGHVPMILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSME 291 LP YGHVPMILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHG++EIFS+E Sbjct: 241 LPLYGHVPMILGADGEKLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGNEEIFSVE 300 Query: 292 QFCGWFDLDHLSKSPAQFNPEKLNWLNNHYIKLADNARLATLARPLLEKEGAQFDGAPPL 351 QFC WFDLDHLSKSPAQFNPEKL +NNHYIKLADN RLA L +PL+E++GA F AP L Sbjct: 301 QFCAWFDLDHLSKSPAQFNPEKLASINNHYIKLADNERLAALVKPLMEQDGADFSNAPAL 360 Query: 352 AQTIALLKDRANTVNEIAAAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWS 411 + I LLK+RA+TVNEI AA++FYR+PAPDAAL+AQH T+A+KPALADFA R A+VEW+ Sbjct: 361 PKVIGLLKERAHTVNEIGVAAMLFYRKPAPDAALLAQHFTDAVKPALADFAARCASVEWN 420 Query: 412 KEAIAPMIKEVLAAHGIKMPQLAMPLRLIVAGQLQTPAIDAVLELFGRDVVLARLQNYL 470 KE++APMIKEVLAAH +KMPQ+AMPLRL++ GQLQTPAIDAVLEL GR+ V+ARLQ +L Sbjct: 421 KESLAPMIKEVLAAHALKMPQIAMPLRLMLTGQLQTPAIDAVLELLGREAVMARLQPHL 479 >ref|YP_001352803.1| glutamyl-tRNA synthetase [Janthinobacterium sp. Marseille] sp|A6SX06|SYE_JANMA RecName: Full=Glutamyl-tRNA synthetase; AltName: Full=Glutamate--tRNA ligase; Short=GluRS gb|ABR88734.1| Glutamyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 463 Score = 806 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 379/457 (82%), Positives = 421/457 (92%) Query: 10 VRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFILRIEDTDVERSTPEAVQAIIEGMQ 69 VRTRFAPSPTGYLH+GGARTALFSWAYAR FGGTF+LRIEDTD+ERSTPEAVQAIIEGM+ Sbjct: 3 VRTRFAPSPTGYLHVGGARTALFSWAYARHFGGTFVLRIEDTDLERSTPEAVQAIIEGME 62 Query: 70 WLGLEHDEGPFYQMKRMDRYREVIGQMLEQGTAYYCYCTPEEVEAMRERQRAAGEKPRYD 129 WLGL HDEGPFYQM+RMDRYREVIGQML GTAY+CY +PEEVEAMRERQRAAGEKPRYD Sbjct: 63 WLGLHHDEGPFYQMQRMDRYREVIGQMLAAGTAYHCYSSPEEVEAMRERQRAAGEKPRYD 122 Query: 130 GTWRPEAGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDDLVIARPDGT 189 GTWRPEAGKTLPAIPEGRKPVVRF+NP +G+V+W DVVKG ITISNRELDDLVIARPDGT Sbjct: 123 GTWRPEAGKTLPAIPEGRKPVVRFRNPTEGDVTWLDVVKGSITISNRELDDLVIARPDGT 182 Query: 190 PTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPMILGADGEKL 249 PTYNFCV VDD DMKITHVIRGDDHVNNTPRQINIL+ALG TLP YGH+PMILG DGEKL Sbjct: 183 PTYNFCVAVDDSDMKITHVIRGDDHVNNTPRQINILQALGATLPHYGHLPMILGTDGEKL 242 Query: 250 SKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSMEQFCGWFDLDHLSKSPAQF 309 SKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDE+FSMEQF WFDLDHL+KSPAQF Sbjct: 243 SKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEVFSMEQFTQWFDLDHLTKSPAQF 302 Query: 310 NPEKLNWLNNHYIKLADNARLATLARPLLEKEGAQFDGAPPLAQTIALLKDRANTVNEIA 369 NPEKL+WLNNHYIK ADN RLA L RP++E GAQF+ AP LA IAL+K+R NT+NE+A Sbjct: 303 NPEKLDWLNNHYIKQADNTRLAGLVRPMMEGLGAQFENAPDLAAVIALMKERVNTLNELA 362 Query: 370 AAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWSKEAIAPMIKEVLAAHGIK 429 AA++FYRQPA DAAL+AQH+T+AI+PALA + +++ TV WSKEA++ +KEVLAAH +K Sbjct: 363 VAAMLFYRQPAADAALLAQHLTDAIRPALAQYVEQLKTVAWSKEALSATLKEVLAAHKLK 422 Query: 430 MPQLAMPLRLIVAGQLQTPAIDAVLELFGRDVVLARL 466 MPQLAMPLRL++ GQLQTP+IDAV+ELFGR+VVLARL Sbjct: 423 MPQLAMPLRLLITGQLQTPSIDAVVELFGREVVLARL 459 >ref|YP_001099291.1| glutamyl-tRNA synthetase [Herminiimonas arsenicoxydans] sp|A4G3S7|SYE_HERAR RecName: Full=Glutamyl-tRNA synthetase; AltName: Full=Glutamate--tRNA ligase; Short=GluRS emb|CAL61164.1| Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) [Herminiimonas arsenicoxydans] Length = 467 Score = 790 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 370/463 (79%), Positives = 414/463 (89%) Query: 8 TPVRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFILRIEDTDVERSTPEAVQAIIEG 67 TP+RTRFAPSPTGYLH+GGARTALFSWAYAR FGGTF+LRIEDTD+ERSTPEAVQAIIEG Sbjct: 5 TPIRTRFAPSPTGYLHVGGARTALFSWAYARHFGGTFVLRIEDTDLERSTPEAVQAIIEG 64 Query: 68 MQWLGLEHDEGPFYQMKRMDRYREVIGQMLEQGTAYYCYCTPEEVEAMRERQRAAGEKPR 127 M+WLGL HDEGPFYQM+RMDRYREVI QML GTAYYCY + EEVEAMRERQRAAGEKPR Sbjct: 65 MEWLGLHHDEGPFYQMQRMDRYREVIAQMLAAGTAYYCYSSSEEVEAMRERQRAAGEKPR 124 Query: 128 YDGTWRPEAGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDDLVIARPD 187 YDGTWRPEAGKTLPAIP RKPVVRF+NP +G+V+W DVVKG ITISNRELDDLVIAR D Sbjct: 125 YDGTWRPEAGKTLPAIPADRKPVVRFRNPMEGDVTWLDVVKGQITISNRELDDLVIARQD 184 Query: 188 GTPTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPMILGADGE 247 GTPTYNFCV VDD DMKITHVIRGDDHVNNTPRQINILKALG LP YGH+PMILGADG Sbjct: 185 GTPTYNFCVAVDDSDMKITHVIRGDDHVNNTPRQINILKALGAELPHYGHLPMILGADGA 244 Query: 248 KLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSMEQFCGWFDLDHLSKSPA 307 KLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDE+FSMEQF WFDLDHL+KSPA Sbjct: 245 KLSKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEVFSMEQFTEWFDLDHLTKSPA 304 Query: 308 QFNPEKLNWLNNHYIKLADNARLATLARPLLEKEGAQFDGAPPLAQTIALLKDRANTVNE 367 QF+PEKL+W+NNHYIK ADN RLA L +P++E GAQFD AP L I L+K+R T+NE Sbjct: 305 QFDPEKLDWINNHYIKQADNTRLAGLIKPMMENLGAQFDNAPDLPAVIGLMKERVKTLNE 364 Query: 368 IAAAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWSKEAIAPMIKEVLAAHG 427 +A A++FYRQPAPDAAL+ QH+T+A+KPALA + +++ TV W K+A++ +KEVLA H Sbjct: 365 LAVTAMLFYRQPAPDAALLTQHLTDAVKPALAQYVEQLKTVAWGKDALSAALKEVLATHK 424 Query: 428 IKMPQLAMPLRLIVAGQLQTPAIDAVLELFGRDVVLARLQNYL 470 +KMPQLAMPLRLI+ GQLQTP+IDAV+ELFGR+VVLAR+ NYL Sbjct: 425 LKMPQLAMPLRLIITGQLQTPSIDAVVELFGREVVLARIANYL 467 >ref|ZP_08276270.1| Glutamyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30260.1| Glutamyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 462 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 361/457 (78%), Positives = 411/457 (89%), Gaps = 2/457 (0%) Query: 10 VRTRFAPSPTGYLHLGGARTALFSWAYARRFGGTFILRIEDTDVERSTPEAVQAIIEGMQ 69 VRTRFAPSPTGYLHLGGARTALF+WAYAR FGGTFILRIEDTD+ERSTP+AVQAI++GM Sbjct: 3 VRTRFAPSPTGYLHLGGARTALFAWAYARHFGGTFILRIEDTDLERSTPQAVQAILDGMA 62 Query: 70 WLGLEHDEGPFYQMKRMDRYREVIGQMLEQGTAYYCYCTPEEVEAMRERQRAAGEKPRYD 129 WLGL+HDEGPFYQM+RMDRYREV+GQ+L G AY+CY +P EVEAMRERQR AG+KPRYD Sbjct: 63 WLGLQHDEGPFYQMQRMDRYREVVGQLLASGAAYHCYSSPAEVEAMRERQRLAGDKPRYD 122 Query: 130 GTWRPEAGKTLPAIPEGRKPVVRFKNPQDGEVSWNDVVKGPITISNRELDDLVIARPDGT 189 GTWRPE GKTLP +P R+PVVRF+NP DG+V+W D+VKGPITI+NRE+DDLVIARPDGT Sbjct: 123 GTWRPEPGKTLPPVPADRQPVVRFRNPLDGQVTWIDLVKGPITIANREMDDLVIARPDGT 182 Query: 190 PTYNFCVVVDDWDMKITHVIRGDDHVNNTPRQINILKALGGTLPEYGHVPMILGADGEKL 249 PTYNFCV VDD DM+ITHVIRGDDHVNNTPRQINIL+ALG LPEYGH+PMILG DGEKL Sbjct: 183 PTYNFCVAVDDSDMEITHVIRGDDHVNNTPRQINILQALGAKLPEYGHLPMILGTDGEKL 242 Query: 250 SKRHGAVSVMDYPAQGYLPEAMLNYLARLGWSHGDDEIFSMEQFCGWFDLDHLSKSPAQF 309 SKRHGAVSVMDYPAQG+LPEAMLNYLARLGWSHGD+EIFSM QF WFDLDHLSKSPAQF Sbjct: 243 SKRHGAVSVMDYPAQGFLPEAMLNYLARLGWSHGDEEIFSMAQFIEWFDLDHLSKSPAQF 302 Query: 310 NPEKLNWLNNHYIKLADNARLATLARPLLEKEGAQFDGAPPLAQTIALLKDRANTVNEIA 369 NPEKL W+NNHYIK D+A+LA L RPL+ AQFDG+P LA+ I L+K+RANT+ E+A Sbjct: 303 NPEKLAWVNNHYIKHTDDAQLAELVRPLMID--AQFDGSPDLARAIGLMKERANTLMEVA 360 Query: 370 AAALMFYRQPAPDAALVAQHITEAIKPALADFAQRVATVEWSKEAIAPMIKEVLAAHGIK 429 +A ++FYRQP PDAAL+ QH+T+A+KPALADFA R TVEW+K A+A MIKEVLA+HG+K Sbjct: 361 SATMLFYRQPQPDAALLTQHLTDAVKPALADFAARCDTVEWTKVALAAMIKEVLASHGLK 420 Query: 430 MPQLAMPLRLIVAGQLQTPAIDAVLELFGRDVVLARL 466 MPQLAMPLRL++ GQLQTPAIDAV+ELFGR +VL RL Sbjct: 421 MPQLAMPLRLLLTGQLQTPAIDAVIELFGRPLVLQRL 457