BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3703.p         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003744012.1| hypothetical protein RCFBP_10040 [Ralstonia ...   266   8e-69

>ref|YP_003744012.1| hypothetical protein RCFBP_10040 [Ralstonia solanacearum CFBP2957]
 emb|CBJ41358.1| protein of unknown function [Ralstonia solanacearum CFBP2957]
          Length = 1183

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 169/529 (31%), Positives = 267/529 (50%), Gaps = 56/529 (10%)

Query: 1   MLYFVQSQRWDIWQVMGNGLTRKIMHQVSVKQYAALVTGFLTAAAPKTCSRGAANLEAPL 60
           ++++    +WD+W+   +G  +K++ QV+ ++YA +  G    A    C+RGA+NL A L
Sbjct: 68  LVFYKDRCKWDVWRSYNDGTLKKLLEQVTPEEYARMADGLKDDAKGSVCARGASNLPAGL 127

Query: 61  ISINGAKDVQSVWLAFTPRLWSPPVLQRYADNPMVDLPGPDGKAVRKEKLRTLRGREIYP 120
           I++ G      +WLA TP LW+P VL+ Y           D  + R  ++  L+ +    
Sbjct: 128 ITLVGPNTQSEIWLACTPHLWAPQVLRDYTT---------DRHSKRATRMTLLKAK---- 174

Query: 121 AKWIKQGEFPQSGCLPLNAANLEQHVADF---VKEGGA---AFVKGFEFALKPLDNERFG 174
             WI+ G  P+ G + LN   L+ +V +F   +   GA   + +  FE AL PL  +RFG
Sbjct: 175 -AWIEGGTLPEKGTMLLNTDALQHNVIEFNGAIPPAGAKRASILSAFENALVPLATDRFG 233

Query: 175 QAAAMDKAVRATEKLDHPTLYVNKSLLVMLPDDVGVIEQHNHLRLCALESQKAWAAGGPH 234
           QA AM +AVR  EK   P    +K+L+VML D +GV+  HN +RL  +E++KAWAAG P 
Sbjct: 234 QAPAMVRAVRDIEKTAGPK-SKDKALIVMLQDPIGVVADHNQIRLMTVEAKKAWAAGSPD 292

Query: 235 SDGTGFDPLRSWKLRSALHVEMIESWVVATRLADQKTLQEAGGYRHHHIISEAEFEQIRA 294
            +G   DP R WKLRS+LH + IE W +A    + +        R    ++E +F + +A
Sbjct: 293 YNGRDADPERPWKLRSSLHAQTIEGWAIAQAREEARRYVTREMNRGIPPMTEEDFRKQKA 352

Query: 295 REQASGKAYY----------------PLGTKITRNDSK-------------PGTYRVTPP 325
                  A +                 L     R D++             PG       
Sbjct: 353 AGTLPDGATFESIPFMDVDYSRLLKGELPKSTVRLDTEGRPVPQTVGLRDHPGQQTTLGY 412

Query: 326 PAQIEQKLESVAE-----QNARSRIERYRGKLRMEELEQFRQEFRAGMARWET-YVARLD 379
           P      +++VA+     Q A  R +RYR KLR  EL  +R  ++    RW+  ++A+ D
Sbjct: 413 PRLPSADVKAVADHHYNGQTATGRRDRYREKLRFGELTDWRNTYQKASDRWDAEFIAKRD 472

Query: 380 GDHVRWLTSGSLALTLRHDFDQNLSLTAVSSAYGSVVQQVFEYLDRLGAVEKAWGGGAIS 439
            D+V WL S SL   + HDFD  ++L  +  A G++ QQV +   RL AVEKA GGGA+ 
Sbjct: 473 RDYVAWLKSPSLEQAMLHDFDWGINLKNIVPALGTIAQQVSDVASRLVAVEKACGGGALG 532

Query: 440 VSSSRELARAYGKDPEAPVTWLEQAMLEPWDLYEAILSDPGEAQGCQRK 488
             S++       +  + P  W++++++ P+D  ++I+SDPG+ +    K
Sbjct: 533 SDSAKVFVEWLDRPIDDPKNWVDRSLVVPFDATQSIMSDPGKRKDTMEK 581