BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3702.p         (499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003744012.1| hypothetical protein RCFBP_10040 [Ralstonia ...   268   2e-69

>ref|YP_003744012.1| hypothetical protein RCFBP_10040 [Ralstonia solanacearum CFBP2957]
 emb|CBJ41358.1| protein of unknown function [Ralstonia solanacearum CFBP2957]
          Length = 1183

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 180/534 (33%), Positives = 277/534 (51%), Gaps = 44/534 (8%)

Query: 1    MEMMMDP-ATERYVTISVKLPIGEALDAMVQGVRPASLGMTMETKVGTDRTTRHQSRDAL 59
            ME +  P   + YVT+  K+P G+ LDA+ +      +  +M +K  T R  R ++   L
Sbjct: 657  MEQVTHPDVAQPYVTVRFKIPQGDVLDAVAEAFSKGQIEASMTSKAATTRAERRETGRTL 716

Query: 60   RKLAKHQARGLQLPEYFPVVVTERKLAELKAHAGRQQEQLVEVVGDGQLGHLSERFQLPK 119
            RKLA     GL +PE +PV++T+  LA ++  A R  E+LVEVV D  LG L + F+LPK
Sbjct: 717  RKLAGRP--GLDVPESYPVMLTQDTLARIQKQAARAGEELVEVVPDDILGGLKQPFKLPK 774

Query: 120  STALKLLGEQASLAKAGRQALWSRQGKITLVLASVQMAALTAALNKLDQEEGDAYVDTLM 179
            S A +L+GEQA+  +A  + L +++ ++  VLA  Q+ AL  +L  L   +G  YVD LM
Sbjct: 775  SLATRLIGEQATAGRATLETLVAKETRVVRVLAVFQVWALLVSLKSLKNAQGYEYVDALM 834

Query: 180  SVMGSTAGLLEGAFGISAAAVEIRRAGNKLVLSSSLMA-ASVLRLLSGMAGAAASGFDMV 238
            SV    +GL++G   IS   +E R  G  L L     A  ++LRL SGMAGAA S FD V
Sbjct: 835  SVFSCVSGLMQGGLAISLTTIEARTVGAGLKLVPRAAANITLLRLASGMAGAAGSAFDAV 894

Query: 239  AAIAKYSSRNARGERAAAKSYLVSFGFFAAS----AISASG----SFTIAFANARVSRFV 290
             + AKY++R   G+  AA  Y      FA S    A+ AS     S + + A +   R  
Sbjct: 895  GSFAKYAARKGTGDTQAATEYFRVGLMFAGSAGALAMGASAIYLRSLSQSLAKSTAQR-- 952

Query: 291  ISRAIVVG-LGGATSATMVAATATGIGILLGIAGFAFALYAESLEDDLNEIFLKRCYWGK 349
             + AI VG LGGA    ++ AT TG+GI++ + GF ++LYA  +EDDLN+ FLKR YWG 
Sbjct: 953  -AAAIAVGELGGAAFVGLIGATLTGVGIVVSVIGFGWSLYALYMEDDLNDTFLKRSYWGI 1011

Query: 350  SERTETRFAAAEEPLDKRNLEEMLTWSERGLAAEVKGFQSLSVGVKASLTWSKNYFSD-- 407
             +   + F      +   +   +  W ++GL  E + F  L++G+K +L W++       
Sbjct: 1012 GDSPVSSFGGPR--VSHGDQAPVEAWIKKGLLEEAEAFAGLTLGIKITLEWARQEMGTPS 1069

Query: 408  -------------------NVLQARIEVVHEGQAPRVDYTVQLLPENLGRT----AEESA 444
                               + L+A++E    G   R+ +++  + ++ G+      ++  
Sbjct: 1070 IGEMVSPILVGGYKYLTRGHALKAKLESQSHGDNRRISWSIT-VKDSAGKILTGLTDKDV 1128

Query: 445  LMVLDADSRRYVLDIKMPLDAKTWNAAQSAHLTYRLYEQVPRAPFAQDAFELKR 498
             +  D DS R V ++ +PLD   +  A  A  TY+ YEQ  R   + D   +K+
Sbjct: 1129 SLRSDKDSGRDVFEVTLPLDDTAYEQAAQAEFTYKFYEQYERVGLSSDTLRVKK 1182