BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3685.p (161 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776457.1| transcription regulator protein [Herbaspiril... 231 2e-59 ref|YP_004751576.1| organic hydroperoxide resistance transcripti... 163 7e-39 ref|YP_002986152.1| MarR family transcriptional regulator [Dicke... 160 6e-38 ref|YP_003002770.1| MarR family transcriptional regulator [Dicke... 160 8e-38 ref|YP_003335198.1| MarR family transcriptional regulator [Dicke... 159 1e-37 >ref|YP_003776457.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64549.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 158 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 129/158 (81%), Positives = 141/158 (89%) Query: 4 MDKTHTTNLPDALIDEALLLDNQLCFAMYSASLAMTKAYKKILAPLEITYPQYLVMLVLW 63 MD T L + LID+ALLLD+QLCFAMYSASLAMTKAYKK+LAPL+ITYPQYLVM+VLW Sbjct: 1 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW 60 Query: 64 EKDGVTVSELGTRLFLDSGTLTPLLKRMESMGLLHRNRDAGDERRVVVSLSDGGRALREK 123 EKD VTVSELG RLFLDSGTLTPLLKRME+MGLLHR RDA DERRV+VSL+ GRALREK Sbjct: 61 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK 120 Query: 124 AKAVPQQMSCMLPALDQIKALVVELKQVRKGLIDAEDE 161 AK VP QMSCMLP+LDQ+K LVVELKQVRKGL DAED+ Sbjct: 121 AKTVPLQMSCMLPSLDQVKNLVVELKQVRKGLQDAEDK 158 >ref|YP_004751576.1| organic hydroperoxide resistance transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK60753.1| Organic hydroperoxide resistance transcriptional regulator [Collimonas fungivorans Ter331] Length = 161 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 88/152 (57%), Positives = 115/152 (75%), Gaps = 2/152 (1%) Query: 6 KTHTTNL-PDALIDEALLLDNQLCFAMYSASLAMTKAYKKILAPLEITYPQYLVMLVLWE 64 K T NL P++ ++LLLDNQLCFA+YSASL MTK YK +L + +TYPQYLV+L LWE Sbjct: 5 KQSTANLAPESFGPDSLLLDNQLCFALYSASLTMTKLYKPLLQKMGLTYPQYLVLLTLWE 64 Query: 65 KDGVTVSELGTRLFLDSGTLTPLLKRMESMGLLHRNRDAGDERRVVVSLSDGGRALREKA 124 +D +TVS LG RLFLDSGTLTPLLKR+ES G L R R DER+V+VSL+ G LR++A Sbjct: 65 RDELTVSALGERLFLDSGTLTPLLKRLESSGFLRRQRSPHDERQVIVSLTAAGNNLRQQA 124 Query: 125 KAVPQQMSCMLP-ALDQIKALVVELKQVRKGL 155 +PQQ+SC + +LD++KAL EL+++R + Sbjct: 125 LEIPQQVSCSVECSLDEVKALTQELRRLRAAM 156 >ref|YP_002986152.1| MarR family transcriptional regulator [Dickeya dadantii Ech703] gb|ACS84330.1| transcriptional regulator, MarR family [Dickeya dadantii Ech703] Length = 157 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 85/153 (55%), Positives = 117/153 (76%), Gaps = 1/153 (0%) Query: 4 MDKTHTTNLPDALIDEALLLDNQLCFAMYSASLAMTKAYKKILAPLEITYPQYLVMLVLW 63 M+ T P +L DEA LD QLCFA+YSA+LAM K Y+++L+ L +TYPQYLVMLVLW Sbjct: 1 MNTKDTQTSPASLGDEAYRLDGQLCFALYSANLAMNKLYRRLLSSLNLTYPQYLVMLVLW 60 Query: 64 EKDGVTVSELGTRLFLDSGTLTPLLKRMESMGLLHRNRDAGDERRVVVSLSDGGRALREK 123 E+DG+TVSELG RLFLDS TLTPLLKR++S GL+ R R DER+V++ L+D GRAL+++ Sbjct: 61 ERDGLTVSELGERLFLDSATLTPLLKRLQSAGLVVRQRGTEDERQVMIYLTDAGRALQQQ 120 Query: 124 AKAVPQQMSCMLP-ALDQIKALVVELKQVRKGL 155 A+AVP+ + C +++Q++A+ EL+ +R L Sbjct: 121 ARAVPEGVFCASECSVEQLRAIKQELEILRARL 153 >ref|YP_003002770.1| MarR family transcriptional regulator [Dickeya zeae Ech1591] gb|ACT05291.1| transcriptional regulator, MarR family [Dickeya zeae Ech1591] Length = 156 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 83/148 (56%), Positives = 112/148 (75%), Gaps = 1/148 (0%) Query: 10 TNLPDALIDEALLLDNQLCFAMYSASLAMTKAYKKILAPLEITYPQYLVMLVLWEKDGVT 69 TN L D+A LD QLCFA+YSA+LAM K Y+++L L +TYPQYLVMLVLWE+DG+T Sbjct: 6 TNTQPTLSDDAFQLDGQLCFALYSANLAMNKLYRRLLTELNLTYPQYLVMLVLWERDGIT 65 Query: 70 VSELGTRLFLDSGTLTPLLKRMESMGLLHRNRDAGDERRVVVSLSDGGRALREKAKAVPQ 129 VSELG RLFLDS TLTPLLKR+++ GL+ R R DER+V++ L+D GR L++KAKAVP+ Sbjct: 66 VSELGERLFLDSATLTPLLKRLQTAGLVTRRRGTEDERQVLIELTDDGRGLQDKAKAVPE 125 Query: 130 QMSCMLPA-LDQIKALVVELKQVRKGLI 156 + C ++Q++A+ +L+ +R LI Sbjct: 126 GVFCASECNIEQLRAIKHDLETLRASLI 153 >ref|YP_003335198.1| MarR family transcriptional regulator [Dickeya dadantii Ech586] gb|ACZ78492.1| transcriptional regulator, MarR family [Dickeya dadantii Ech586] Length = 156 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 86/154 (55%), Positives = 115/154 (74%), Gaps = 2/154 (1%) Query: 4 MDKTHTTNLPDALIDEALLLDNQLCFAMYSASLAMTKAYKKILAPLEITYPQYLVMLVLW 63 M++ T P L D+A LD QLCFA+YSA+LAM K Y+++L L +TYPQYLVMLVLW Sbjct: 1 MNRNDTDTKP-ILSDDAFRLDGQLCFALYSANLAMNKLYRRLLTELNLTYPQYLVMLVLW 59 Query: 64 EKDGVTVSELGTRLFLDSGTLTPLLKRMESMGLLHRNRDAGDERRVVVSLSDGGRALREK 123 E+DGVTVSELG RLFLDS TLTPLLKR+++ GL+ R R DER+V++ L+D GRAL+ K Sbjct: 60 ERDGVTVSELGERLFLDSATLTPLLKRLQTAGLVTRRRGTQDERQVLIELTDDGRALQTK 119 Query: 124 AKAVPQQMSCMLPA-LDQIKALVVELKQVRKGLI 156 AKAVP+ + C ++Q++A+ +L+ +R LI Sbjct: 120 AKAVPEGVFCASECNIEQLRAIKHDLETLRASLI 153