BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3674.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776450.1| hypothetical protein Hsero_3054 [Herbaspiril... 536 e-150 ref|YP_001889359.1| hypothetical protein Bphyt_5642 [Burkholderi... 385 e-105 ref|ZP_07675485.1| conserved hypothetical protein [Ralstonia sp.... 379 e-103 ref|YP_003607705.1| hypothetical protein BC1002_4201 [Burkholder... 357 1e-96 ref|ZP_08273875.1| hypothetical protein IMCC9480_2159 [Oxalobact... 354 2e-95 >ref|YP_003776450.1| hypothetical protein Hsero_3054 [Herbaspirillum seropedicae SmR1] gb|ADJ64542.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 374 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 346/387 (89%), Positives = 361/387 (93%), Gaps = 13/387 (3%) Query: 1 MLGFDFRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVEQVERVRPAKV 60 MLGFD RVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVE +ERVRP +V Sbjct: 1 MLGFDLRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVELIERVRPPRV 60 Query: 61 PRAVSIAVVFVLAIGIVAAVATIFGARIQEEALRLSEQLPALLRSNDAVSKIPLPGFAEP 120 PR VSIA+VFVLAI IVA VATIFGARIQEEALRLSEQLPALLRSNDAVS++PLPGFAEP Sbjct: 61 PRTVSIALVFVLAIAIVATVATIFGARIQEEALRLSEQLPALLRSNDAVSRLPLPGFAEP 120 Query: 121 LRARILGFIRDQLANGTDQAMPLAKQFGMGVMHAASNLIYLVLVPVISFLLIKEAPAMRD 180 LRARILGF+RDQLA GTDQAMPLAKQFG+GVMHAASNLIYLVLVPVISFLLIKEAPAMR+ Sbjct: 121 LRARILGFVRDQLAAGTDQAMPLAKQFGVGVMHAASNLIYLVLVPVISFLLIKEAPAMRE 180 Query: 181 EILSWMNRSNRKLWDGIIKDLDVLLSRYVRALLFLSIATLVAYSIAFSLMGVPYAMLLAG 240 E+LSWM+R+NRKLWDGI+ DLDVLLSRYVRALLFLS+AT VAYSIAFSLMGVPYAMLLAG Sbjct: 181 EMLSWMSRANRKLWDGIVTDLDVLLSRYVRALLFLSVATFVAYSIAFSLMGVPYAMLLAG 240 Query: 241 LAAVLEFIPFAGPLAASAAALVVAGFSGYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 LAAVLEFIPFAGPLAASAAALVVAGFS YDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE Sbjct: 241 LAAVLEFIPFAGPLAASAAALVVAGFSAYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 Query: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARRAAEAREAELAAQA 360 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARRA+EAR+AEL A Sbjct: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARRASEARQAEL---A 357 Query: 361 AQEALRSAEVAEPATAPPALPPTGRTS 387 AQEALR T PP PPTG S Sbjct: 358 AQEALR--------TEPP--PPTGSAS 374 >ref|YP_001889359.1| hypothetical protein Bphyt_5642 [Burkholderia phytofirmans PsJN] gb|ACD19989.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 361 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 225/360 (62%), Positives = 281/360 (78%), Gaps = 5/360 (1%) Query: 1 MLGFDFRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVEQVERVRPAKV 60 MLGFD R AR VWT L+ALL + Y S+T+LV+VFAVFFSYL+YP+V+ VER+RP ++ Sbjct: 1 MLGFDVRTARQVWTALLIALLFFCIYMASSTLLVVVFAVFFSYLIYPMVDLVERIRPRRM 60 Query: 61 PRAVSIAVVFVLAIGIVAAVATIFGARIQEEALRLSEQLPALLRSNDAVSKIPLPGFAEP 120 PR SIA+VFV+ + ++A V +IFG ++Q+EA L QLP L++S D ++IPLP F EP Sbjct: 61 PRVASIALVFVVVVAVIAVVGSIFGVQLQDEATHLLAQLPQLMKS-DVPNRIPLPHFLEP 119 Query: 121 LRARILGFIRDQLANGTDQAMPLAKQFGMGVMHAASNLIYLVLVPVISFLLIKEAPAMRD 180 LR RI+ F+R Q+ G+D+A+P+A+ G+GVMHAASNLIYLVL+P++SFLLIKE P MR+ Sbjct: 120 LRERIVDFVRGQIETGSDKAVPMARSVGLGVMHAASNLIYLVLIPILSFLLIKEGPQMRE 179 Query: 181 EILSWMNRSNRKLWDGIIKDLDVLLSRYVRALLFLSIATLVAYSIAFSLMGVPYAMLLAG 240 + L +N +R LW I+ DL+VLLS+YVRALLFLS+ATL+ Y +AFSL+GVPYA LLA Sbjct: 180 DFLDLLNDRHRTLWAEIVTDLNVLLSKYVRALLFLSLATLICYGMAFSLLGVPYAFLLAV 239 Query: 241 LAAVLEFIPFAGPLAASAAALVVAGFSGYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 A +LEF+PFAGPL A A LVVA FSGY HLLWLV FI YR+FQDYVLNPYLMSEGVE Sbjct: 240 SAGLLEFVPFAGPLGAVAITLVVAVFSGYPHLLWLVIFIALYRLFQDYVLNPYLMSEGVE 299 Query: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARRAAEAREAELAAQA 360 VSP +VI+GLLAGDQLGGVAGIFL+VPV+A LKII RA + AA E E A +A Sbjct: 300 VSPFLVIVGLLAGDQLGGVAGIFLAVPVIAMLKIIIGRA----RVFYAASHDEGEAARRA 355 >ref|ZP_07675485.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gb|EFP66082.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 350 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 227/349 (65%), Positives = 281/349 (80%) Query: 1 MLGFDFRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVEQVERVRPAKV 60 MLGFD R RIVWTVFL AL + + Y I++ +LV VFAVFFSYL+YPL+EQ+ER P + Sbjct: 1 MLGFDPRTGRIVWTVFLFALAVLIIYKIASVLLVTVFAVFFSYLLYPLIEQLERRMPRQA 60 Query: 61 PRAVSIAVVFVLAIGIVAAVATIFGARIQEEALRLSEQLPALLRSNDAVSKIPLPGFAEP 120 PR+VSI VVF+L + +V ++FG +QEEA RL++QLP LL ++ ++ LP F EP Sbjct: 61 PRSVSIGVVFILVVLVVIVAGSVFGVTVQEEAGRLADQLPKLLDTSTMADRLALPNFLEP 120 Query: 121 LRARILGFIRDQLANGTDQAMPLAKQFGMGVMHAASNLIYLVLVPVISFLLIKEAPAMRD 180 LRARIL F+R+QL+ +DQAMPL + G+GVMHAASNL+YLVL+P++SFL+I EAP++ Sbjct: 121 LRARILEFLREQLSTTSDQAMPLVRNIGLGVMHAASNLVYLVLIPIMSFLMINEAPSIHA 180 Query: 181 EILSWMNRSNRKLWDGIIKDLDVLLSRYVRALLFLSIATLVAYSIAFSLMGVPYAMLLAG 240 +LSW+ S+++LW II DLD LLSRYVRALL LS+ATL+ YSIAF L+GVPYA+LLA Sbjct: 181 ALLSWIRSSDKRLWGNIIDDLDTLLSRYVRALLLLSLATLLFYSIAFYLLGVPYALLLAT 240 Query: 241 LAAVLEFIPFAGPLAASAAALVVAGFSGYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 AAVLEFIPFAGPLAA A + VA FSGY HL WL+GFIV YR+FQDYVLNPYLMSEGV+ Sbjct: 241 TAAVLEFIPFAGPLAAVVAIVTVAVFSGYPHLFWLIGFIVVYRLFQDYVLNPYLMSEGVK 300 Query: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARRAA 349 VSPL+VI+GLLAG+QLGGVAGIFLSVPV+AALKI+ +RA AAQ R A Sbjct: 301 VSPLLVIVGLLAGEQLGGVAGIFLSVPVIAALKIVLSRAWAAQSLGREA 349 >ref|YP_003607705.1| hypothetical protein BC1002_4201 [Burkholderia sp. CCGE1002] gb|ADG18194.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 220/339 (64%), Positives = 270/339 (79%), Gaps = 1/339 (0%) Query: 1 MLGFDFRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVEQVERVRPAKV 60 MLGFD AR VWT L+ALL +V Y S TVLV+VFAVFFSYL+YP+V VERVRP +V Sbjct: 1 MLGFDVGAARKVWTASLLALLFFVIYVASTTVLVIVFAVFFSYLIYPMVALVERVRPRRV 60 Query: 61 PRAVSIAVVFVLAIGIVAAVATIFGARIQEEALRLSEQLPALLRSNDAVSKIPLPGFAEP 120 PR +SIAVVFV+ + ++A V ++FG +Q++A L QLP LLR+ D ++ PLP F EP Sbjct: 61 PRVMSIAVVFVVVVALLAVVGSLFGVELQDQATHLFTQLPGLLRT-DVPNRFPLPHFLEP 119 Query: 121 LRARILGFIRDQLANGTDQAMPLAKQFGMGVMHAASNLIYLVLVPVISFLLIKEAPAMRD 180 LR RI+ F+R Q+ G+D+A+PLA+ G+GV+HAASNLIYLVL+P++SFLLIK+ MRD Sbjct: 120 LRERIVDFVRSQIETGSDKAVPLARSLGLGVVHAASNLIYLVLIPILSFLLIKDGERMRD 179 Query: 181 EILSWMNRSNRKLWDGIIKDLDVLLSRYVRALLFLSIATLVAYSIAFSLMGVPYAMLLAG 240 L+ +NR +R LW I+ D++VLLS+YVRALLFLS+ATL Y +AFSL+GVPYA LLA Sbjct: 180 AFLALLNRRHRVLWSEIVDDVNVLLSKYVRALLFLSLATLFGYGVAFSLLGVPYAFLLAV 239 Query: 241 LAAVLEFIPFAGPLAASAAALVVAGFSGYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 A +LEF+PFAGPLAA A LVVA FSGY HLLWLV FI YR+FQDYVLNPYLMSEGVE Sbjct: 240 SAGLLEFVPFAGPLAAVAITLVVAVFSGYPHLLWLVIFIGLYRLFQDYVLNPYLMSEGVE 299 Query: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRA 339 VSP +VI+GLLAGDQLGGVAGIFL+VPV+A LKI+ RA Sbjct: 300 VSPFLVIVGLLAGDQLGGVAGIFLAVPVIATLKIVIGRA 338 >ref|ZP_08273875.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32653.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] Length = 354 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 206/343 (60%), Positives = 272/343 (79%) Query: 1 MLGFDFRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVEQVERVRPAKV 60 M GFD R+AR+VWT LVA L+V Y++ +T+LV+VFA+FFSYL+YPLV +ER +P +V Sbjct: 1 MFGFDVRIARVVWTGLLVAFFLFVAYSVRSTLLVVVFAIFFSYLLYPLVGLIERFKPLRV 60 Query: 61 PRAVSIAVVFVLAIGIVAAVATIFGARIQEEALRLSEQLPALLRSNDAVSKIPLPGFAEP 120 PR VSIA+VF+ A+ + A +FG+ I EEA+RLS+QLP LL + ++IPLPGF E Sbjct: 61 PRTVSIAIVFIFAVLVFGAAGALFGSTITEEAMRLSQQLPTLLDPANISARIPLPGFLEA 120 Query: 121 LRARILGFIRDQLANGTDQAMPLAKQFGMGVMHAASNLIYLVLVPVISFLLIKEAPAMRD 180 RA+IL F+ +Q+ +GT QA+P+A++ GM VMH A+NLIYL+L+PV+SFLLIKEAP +R Sbjct: 121 QRAQILAFVTEQVQHGTGQALPMAQRLGMEVMHVATNLIYLILIPVLSFLLIKEAPLLRA 180 Query: 181 EILSWMNRSNRKLWDGIIKDLDVLLSRYVRALLFLSIATLVAYSIAFSLMGVPYAMLLAG 240 E LS + ++ LW GI++DLDVLLS+YVRALL LS+AT V YS+ FS +GVPY++LLAG Sbjct: 181 EFLSSLGAASAPLWRGILEDLDVLLSKYVRALLLLSMATFVVYSLVFSALGVPYSLLLAG 240 Query: 241 LAAVLEFIPFAGPLAASAAALVVAGFSGYDHLLWLVGFIVAYRVFQDYVLNPYLMSEGVE 300 +A +LE IPF GPL+A L V+ FSG+ HLLWL+ FI+AYR+FQDYVL+P LMSEGVE Sbjct: 241 VAGLLEVIPFVGPLSAVLIILCVSAFSGFPHLLWLLVFIIAYRMFQDYVLSPMLMSEGVE 300 Query: 301 VSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQ 343 VSPL+VI+GLLAGD+L GV GIFLSVPV+AA+KI+ R + + Sbjct: 301 VSPLLVIVGLLAGDELAGVIGIFLSVPVLAAIKILIVRVRSPR 343