BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3670.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776446.1| sulfite oxidase transmembrane subunit YedZ p... 339 2e-91 ref|YP_001101360.1| hypothetical protein HEAR3130 [Herminiimonas... 236 1e-60 ref|YP_004751102.1| hypothetical protein CFU_0442 [Collimonas fu... 220 9e-56 ref|YP_001355062.1| hypothetical protein mma_3372 [Janthinobacte... 212 3e-53 ref|YP_002006890.1| sulfite oxidase subunit yedz [Cupriavidus ta... 211 5e-53 >ref|YP_003776446.1| sulfite oxidase transmembrane subunit YedZ protein [Herbaspirillum seropedicae SmR1] gb|ADJ64538.1| sulfite oxidase transmembrane subunit YedZ protein [Herbaspirillum seropedicae SmR1] Length = 212 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 190/209 (90%), Positives = 202/209 (96%) Query: 1 MQLAPAALRNLKPRTVTGLWWLFLALAFVPLGRLVVLGFTGGLGANPLEFITHSTGDWTL 60 MQLAPAAL NLKPRTVTGLWWLFLALA +PL RLV+LGFTGGLGANPLEFITHSTGDWTL Sbjct: 1 MQLAPAALHNLKPRTVTGLWWLFLALACLPLLRLVILGFTGGLGANPLEFITHSTGDWTL 60 Query: 61 YLFCITLAVTPLRKITGLNWLVRMRRMLGLMAFLYLCLHFTTFVWFDHFFDLGEIWKDIV 120 YLFC+TLAVTPLRK+TGLNWLVRMRRMLGLMAF YLCLHFTTFVWFDHFFDLGEIWKDI+ Sbjct: 61 YLFCLTLAVTPLRKLTGLNWLVRMRRMLGLMAFFYLCLHFTTFVWFDHFFDLGEIWKDIL 120 Query: 121 KRPFITVGVLALLLSIPLAITSTNGMVRRLGGKRWQALHRLVYVIVPLGVLHYWWDKAGK 180 KRPFITVGV+ALLLSIPLA+TSTNGMVRRLGGKRWQALHRLVY+IVPLGVLHYWWDKAGK Sbjct: 121 KRPFITVGVIALLLSIPLALTSTNGMVRRLGGKRWQALHRLVYLIVPLGVLHYWWDKAGK 180 Query: 181 NLIAQPLLFAVLVGVMLALRLLWRRSGAS 209 NLIAQPLLFAVLVG+ML LRL+WR+ A+ Sbjct: 181 NLIAQPLLFAVLVGLMLVLRLVWRKGRAA 209 >ref|YP_001101360.1| hypothetical protein HEAR3130 [Herminiimonas arsenicoxydans] sp|A4G9Q2|YEDZ_HERAR RecName: Full=Sulfoxide reductase heme-binding subunit yedZ; AltName: Full=Flavocytochrome yedZ emb|CAL63239.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 218 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 121/182 (66%), Positives = 147/182 (80%), Gaps = 1/182 (0%) Query: 22 LFLALAFVPLGRLVVLGFTGGLGANPLEFITHSTGDWTLYLFCITLAVTPLRKITGLNWL 81 LF+A A +P GRL + T LGANP+EFIT +TGDWTLY C+TLA+TPLR+++ NWL Sbjct: 18 LFIA-ALLPFGRLALFTLTDQLGANPIEFITRNTGDWTLYFLCMTLAITPLRRLSQWNWL 76 Query: 82 VRMRRMLGLMAFLYLCLHFTTFVWFDHFFDLGEIWKDIVKRPFITVGVLALLLSIPLAIT 141 +R+RRMLGL AF Y CLHFTTF+WFDHFFD+ E+ KD+VKRPFITVG A +L IPLAIT Sbjct: 77 IRLRRMLGLFAFFYACLHFTTFLWFDHFFDVNEMLKDVVKRPFITVGFSAFVLLIPLAIT 136 Query: 142 STNGMVRRLGGKRWQALHRLVYVIVPLGVLHYWWDKAGKNLIAQPLLFAVLVGVMLALRL 201 STNGMV+RLGGKRWQ LHRLVYVI LG+LHYWW KAGK+ QP++F +V V+L +R+ Sbjct: 137 STNGMVKRLGGKRWQWLHRLVYVIAALGILHYWWMKAGKHDFEQPIIFGTIVAVLLLVRV 196 Query: 202 LW 203 W Sbjct: 197 FW 198 >ref|YP_004751102.1| hypothetical protein CFU_0442 [Collimonas fungivorans Ter331] gb|AEK60279.1| putative membrane protein [Collimonas fungivorans Ter331] Length = 218 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 107/164 (65%), Positives = 136/164 (82%) Query: 38 GFTGGLGANPLEFITHSTGDWTLYLFCITLAVTPLRKITGLNWLVRMRRMLGLMAFLYLC 97 GFT LGANP+EFIT S+GDWTLY C+TLAVTPLR+ T NWL+++RRMLGL +F Y C Sbjct: 31 GFTDRLGANPIEFITRSSGDWTLYFLCLTLAVTPLRRFTNWNWLIKLRRMLGLFSFFYAC 90 Query: 98 LHFTTFVWFDHFFDLGEIWKDIVKRPFITVGVLALLLSIPLAITSTNGMVRRLGGKRWQA 157 LHFTTF+WFDHFFD+GE+ KD+VKRPFITVG +A +L IPLA+TSTNGM+RRLGGKRWQ Sbjct: 91 LHFTTFLWFDHFFDVGEMLKDVVKRPFITVGFIAFVLLIPLALTSTNGMIRRLGGKRWQW 150 Query: 158 LHRLVYVIVPLGVLHYWWDKAGKNLIAQPLLFAVLVGVMLALRL 201 LHR +Y I LG+LH+WW +AGK+ +P++F +V ++L +R+ Sbjct: 151 LHRSLYAISMLGILHFWWMRAGKHNFEKPIVFGTIVALLLLVRV 194 >ref|YP_001355062.1| hypothetical protein mma_3372 [Janthinobacterium sp. Marseille] gb|ABR90028.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 213 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 111/181 (61%), Positives = 136/181 (75%) Query: 10 NLKPRTVTGLWWLFLALAFVPLGRLVVLGFTGGLGANPLEFITHSTGDWTLYLFCITLAV 69 N PR +T + + LA +P RL V T LGANP+EFIT +TGDWTLY C+TLA+ Sbjct: 4 NPTPRQLTLVKCVLFLLALLPFARLAVFTVTDQLGANPIEFITRNTGDWTLYFLCMTLAI 63 Query: 70 TPLRKITGLNWLVRMRRMLGLMAFLYLCLHFTTFVWFDHFFDLGEIWKDIVKRPFITVGV 129 TPLR+ + NWL+++RRMLGL AF Y LHF TF WFDHFFD+ E+W D++KRPFITVG Sbjct: 64 TPLRRFSKWNWLLKLRRMLGLFAFFYASLHFMTFFWFDHFFDVSEMWADVLKRPFITVGF 123 Query: 130 LALLLSIPLAITSTNGMVRRLGGKRWQALHRLVYVIVPLGVLHYWWDKAGKNLIAQPLLF 189 A +L IPLA+TSTNGMV+RLGGKRWQ LHRL+Y I LG+LHYWW KAGK+ QP++F Sbjct: 124 TAFVLLIPLAVTSTNGMVKRLGGKRWQWLHRLIYAIALLGILHYWWMKAGKHDFEQPIIF 183 Query: 190 A 190 Sbjct: 184 G 184 >ref|YP_002006890.1| sulfite oxidase subunit yedz [Cupriavidus taiwanensis LMG 19424] emb|CAQ70829.1| conserved hypothetical protein, UPF0191 [Cupriavidus taiwanensis LMG 19424] Length = 227 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 122/208 (58%), Positives = 148/208 (71%), Gaps = 1/208 (0%) Query: 5 PAALRNLKPRTVTGLWWLFLALAFVPLGRLVVLGFTGGLGANPLEFITHSTGDWTLYLFC 64 PA L L P+ V L L LA +P RL+ LG TG GANPLEF+T STG WTL + C Sbjct: 15 PAGLATLAPQRVRALKVLIWVLALLPFVRLLYLGATGQYGANPLEFVTRSTGTWTLVMLC 74 Query: 65 ITLAVTPLRKITGLNWLVRMRRMLGLMAFLYLCLHFTTFVWFDHFFDLGEIWKDIVKRPF 124 +TLA+TPLR++TG NWL+RMRRMLGL AF Y HF ++ D FD+ + KD+ KRPF Sbjct: 75 LTLAITPLRRLTGWNWLIRMRRMLGLFAFFYGLQHFLLWIGVDRGFDVAYMIKDVYKRPF 134 Query: 125 ITVGVLALLLSIPLAITSTNGMVRRLGGKRWQALHRLVYVIVPLGVLHYWWDKAGKNLIA 184 ITVG A +L +PLA+TSTNGMVRRLGGKRWQALHRLVY I L +LHYWW KAGKN Sbjct: 135 ITVGFTAFMLMVPLALTSTNGMVRRLGGKRWQALHRLVYAIAVLAILHYWWHKAGKNDFG 194 Query: 185 QPLLFAVLVGVMLALRLLWR-RSGASGT 211 + ++A +V V+L +RL WR R A+GT Sbjct: 195 EVSIYAAVVFVLLGMRLWWRLRKPAAGT 222