BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3667.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776443.1| outer membrane efflux protein [Herbaspirillu... 555 e-156 ref|YP_903506.1| outer membrane efflux protein [Candidatus Ruthi... 162 1e-37 ref|YP_001944276.1| outer membrane efflux protein [Chlorobium li... 153 7e-35 ref|YP_003655673.1| outer membrane efflux protein [Arcobacter ni... 145 1e-32 ref|ZP_08460179.1| outer membrane efflux protein [Psychrobacter ... 142 1e-31 >ref|YP_003776443.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ64535.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] Length = 441 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 322/397 (81%), Positives = 362/397 (91%) Query: 41 SITLGQLVQQAALNNPAALARQRAVEAAAESVSSARWQFFPTPSMSVERAGVTSSRDISY 100 ++TLG+LV+QAA NNPAAL+RQRAVE+A ESVSSARWQFFP PS+SVERA +SRD+SY Sbjct: 45 AVTLGELVKQAAFNNPAALSRQRAVESAGESVSSARWQFFPNPSISVERASSRNSRDVSY 104 Query: 101 NGDDTVVTLRLQQTLWSGGRLTAQLEQAGHNHESAGEALREQRFRLAEQVISQYSLWVRS 160 GD +VVTLRLQQTLW+GGRLTAQLEQA HN SA EALREQR RLAEQVISQYS+WVRS Sbjct: 105 GGDSSVVTLRLQQTLWAGGRLTAQLEQAEHNQASAEEALREQRLRLAEQVISQYSMWVRS 164 Query: 161 DLATEANQKNLKALEDFLAQSQRREKEGAAARVDVTLVRGRRDQALTDLLGAKASRQSAR 220 DLA AN KNL+ LE FL QS RRE+EGAAARVDVTLVRGRRDQALTDLLGAKA R SAR Sbjct: 165 DLAASANDKNLQELEKFLEQSVRREREGAAARVDVTLVRGRRDQALTDLLGAKAGRSSAR 224 Query: 221 LQLEQLVGLPLSDEELRADVAKMSVSEDLPALTESMLESSPLLKRLRADAKVQESAIQIR 280 LQLEQLVG+PL+DEE+RADVAKM VS+DLP LTES L SSPL+KRLRADA+VQESAI+IR Sbjct: 225 LQLEQLVGMPLTDEEIRADVAKMEVSDDLPTLTESTLGSSPLIKRLRADAQVQESAIKIR 284 Query: 281 SASYWPEVYARLEHQRGNFSVPHTPNANRAFIGMQMQLGAGLSLGSEVAAAQGRYQSALL 340 ASYWPEVYARLEHQRGN+SVP+ P+ NRAFIGMQMQLGAGLSLGSEVAAA+GRY++ALL Sbjct: 285 QASYWPEVYARLEHQRGNYSVPNQPSNNRAFIGMQMQLGAGLSLGSEVAAARGRYEAALL 344 Query: 341 AVDAARLELISQIAATYTEYQQAEARARNLEDVAVSSEEVLASYTRQYLSGRRSWLDVMN 400 AVDAARLEL+SQ+ + YTEYQQA AR+RNLE+VA+S++EVL+SYTRQYLSGRRSWLDVMN Sbjct: 345 AVDAARLELVSQVGSIYTEYQQALARSRNLEEVALSADEVLSSYTRQYLSGRRSWLDVMN 404 Query: 401 AAREVVQTDLQKADVTAMIIADGRKLQLWAYGLDQVR 437 A REVVQ DLQ+ADVTAMIIA+G KL+LWAYGLD+VR Sbjct: 405 AVREVVQADLQRADVTAMIIANGHKLRLWAYGLDEVR 441 >ref|YP_903506.1| outer membrane efflux protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gb|ABL02035.1| outer membrane efflux protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 422 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 116/377 (30%), Positives = 192/377 (50%), Gaps = 1/377 (0%) Query: 44 LGQLVQQAALNNPAALARQRAVEAAAESVSSARWQFFPTPSMSVERAGVTSSRDISYNGD 103 L L+ +A +P+ + ++A ++SA+WQ+FP P SV + +S+ D +YNGD Sbjct: 30 LSNLISKAIAYHPSIKSNIFLEDSAKNEITSAKWQYFPIPKFSVSQVD-SSNTDRNYNGD 88 Query: 104 DTVVTLRLQQTLWSGGRLTAQLEQAGHNHESAGEALREQRFRLAEQVISQYSLWVRSDLA 163 V T+ L Q LW+GG + A L ++ A + + + LA +VI+ YS W S L Sbjct: 89 SRVSTISLTQPLWAGGSIDAGLAKSRAKLLLAQASTKVVQQDLALRVINAYSKWYDSYLK 148 Query: 164 TEANQKNLKALEDFLAQSQRREKEGAAARVDVTLVRGRRDQALTDLLGAKASRQSARLQL 223 ++ K+ K + +RR K+G ++ D+ LV R QA A +++ L L Sbjct: 149 KKSYSKSQKEYSMLRTRLRRRIKQGLSSSSDLNLVNSRSTQAEASFNSAIIQHKNSLLNL 208 Query: 224 EQLVGLPLSDEELRADVAKMSVSEDLPALTESMLESSPLLKRLRADAKVQESAIQIRSAS 283 E L+G + ++L D + + + L+ L +SP +K+++A++ V E+ + A Sbjct: 209 EGLLGTSIDSKDLIRDFSIVKFETNQTKLSRKALLTSPRVKQIKAESLVIEAELDQSHAK 268 Query: 284 YWPEVYARLEHQRGNFSVPHTPNANRAFIGMQMQLGAGLSLGSEVAAAQGRYQSALLAVD 343 +P++ +LE Q G+F+ NR FI GAGLS S+ + RYQS + Sbjct: 269 LYPDINLKLERQWGSFTTKDAKTENRIFIEFNSSFGAGLSNFSQTRQIKSRYQSLQAKIK 328 Query: 344 AARLELISQIAATYTEYQQAEARARNLEDVAVSSEEVLASYTRQYLSGRRSWLDVMNAAR 403 ++ QI + + + LE + E+V SY RQ+L+GR++W DVMN+ R Sbjct: 329 DEENKVAQQIKLDWMSSVSLKKQKILLELSLANIEKVRKSYYRQFLAGRKTWQDVMNSIR 388 Query: 404 EVVQTDLQKADVTAMII 420 EV Q + Q A V II Sbjct: 389 EVSQLESQLASVYGEII 405 >ref|YP_001944276.1| outer membrane efflux protein [Chlorobium limicola DSM 245] gb|ACD91297.1| outer membrane efflux protein [Chlorobium limicola DSM 245] Length = 459 Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 195/397 (49%), Gaps = 18/397 (4%) Query: 43 TLGQLVQQAALNNPAALARQRAVEAAAESVSSARWQFFPTPSMSVERAGVTSSRDISYNG 102 +L +++++A +P ++ A +A + S+AR+Q+FP P + V++ G T R Sbjct: 49 SLERMIEEAIRTHPKVSGKRAAYDAGRSATSAARYQYFPAPYIEVQQNGKTGDR------ 102 Query: 103 DDTVVTLRLQQTLWSGGRLTAQLEQAGHNHESAGEALREQRFRLAEQVISQYSLWVRSDL 162 V +QQ LW+ G+L+A L+ A + +S + E + LA V++ Y + Sbjct: 103 ---VGVFGVQQPLWTVGKLSANLKTAKSSEKSLKSGIEETQLSLALSVVNAYQSLLSYHY 159 Query: 163 ATEANQKNLKALEDFLAQSQRREKEGAAARVDVTLVRGRRDQALTDLLGAKASRQSARLQ 222 A + + LE + A RR G +A ++ +LV R Q+ +DL + QSA Q Sbjct: 160 RIIAQEAGVALLEKYSASMSRRVSAGVSATIEQSLVDSRLQQSKSDLRFFQIGFQSALDQ 219 Query: 223 LEQLVGLPLSDEELRADVAKMS-VSEDLPALTESMLESS----PLLKRLRADAKVQESAI 277 L+Q +G ++ R D+ +S VS + +S+L S+ P L RL D + Sbjct: 220 LQQYIGHSVT----RDDIEYLSRVSSEPLGNLDSILASAEQRYPSLARLDFDIETARHQK 275 Query: 278 QIRSASYWPEVYARLEHQRGNFSVPHTPNANRAFIGMQMQLGAGLSLGSEVAAAQGRYQS 337 + A +P + E+QR FS + N + ++ M G+GLS + + AQ + + Sbjct: 276 SYQIAQLFPTFTLKAEYQRDLFSTTPSTNESSVYVSMVQNFGSGLSTFANIGGAQAKIEE 335 Query: 338 ALLAVDAARLELISQIAATYTEYQQAEARARNLEDVAVSSEEVLASYTRQYLSGRRSWLD 397 + + EL + Y + R + SS +VLASYTR +++G+RSWLD Sbjct: 336 TAQLKETVKRELRVVVRNEYETCMSSFERYLLASNTVRSSGDVLASYTRMFIAGKRSWLD 395 Query: 398 VMNAAREVVQTDLQKADVTAMIIADGRKLQLWAYGLD 434 V+NAARE +Q ++ + DV + +L+L+ G + Sbjct: 396 VLNAAREFIQNEVSRGDVLSAYWGSYYRLRLYDAGFE 432 >ref|YP_003655673.1| outer membrane efflux protein [Arcobacter nitrofigilis DSM 7299] gb|ADG93166.1| outer membrane efflux protein [Arcobacter nitrofigilis DSM 7299] Length = 403 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 104/400 (26%), Positives = 199/400 (49%), Gaps = 28/400 (7%) Query: 25 ALMLAVSLAACSLPAQSITLGQLVQQAALNNPAALARQRAVEAAAESVSSARWQFFPTPS 84 +L LA+SL A + + ++++++ L++P + +++ A S++ A W +FPTPS Sbjct: 7 SLGLAISLNASD--SCEYNVNKIIEESFLSHPTMKMSEESIKEAESSLNGAFWNYFPTPS 64 Query: 85 MSVERAGVTSSRDISYNGDDTVVTLRLQQTLWSGGRLTAQLEQAGHNHESAGEALREQRF 144 + + R S G +V +L Q +W+GGR+ A +A +N E A E ++ Sbjct: 65 IELSR---------SKKGLQSV--YKLTQPVWAGGRIDANYNKAKYNKEEAYVTFEENKY 113 Query: 145 RLAEQVISQYSLWVRSDLATEANQKNLKALEDFLAQSQRREKEGAAARVDVTLVRGRRDQ 204 L + ++ + S E K K L FL +RR K G ++ D LV R + Sbjct: 114 NLVDNILEVLYSYEASKDQIEELTKGKKELNGFLKMVERRIKAGVSSDNDRELVISRISK 173 Query: 205 ALTDLLGAKASRQSARLQLEQLVGLPLSDEELRADVAKMSVSEDLPALTESMLESSPLLK 264 +D+ AK S ++A++QLE L+G L+ ++ V K++ +++ ES L+++P LK Sbjct: 174 INSDINSAKNSFKTAKMQLELLMGKKLTC-DINIGVKKLAHKDNIELNIESTLKTNPSLK 232 Query: 265 RLRADAKVQESAIQIRSASYWPEVYARLEHQRGNFSVPHTPNANRAFIGMQMQLGAGLSL 324 + + K ++I AS++P V E + G+ + N ++ + GAGLS Sbjct: 233 KYDSKIKSAREEVKIAKASFFPTVSIVGEQRDGSIYSNDSSKNNSIYLSLTASTGAGLS- 291 Query: 325 GSEVAAAQGRYQSALLAVDAARLELISQ-------IAATYTEYQQAEARARNLEDVAVSS 377 A Y+SA + ++ + E +S+ Y + E + LE ++ Sbjct: 292 ------AYSNYESAKIEMNRMKFEKLSKEKEVEKDFLQNYNSFISIEKELKILEYTVSTT 345 Query: 378 EEVLASYTRQYLSGRRSWLDVMNAAREVVQTDLQKADVTA 417 E VL S R +L G++ WL+++++++E++Q ++ ++ A Sbjct: 346 ENVLESNKRLFLIGKKQWLNLVDSSKELMQLRIEYTNLLA 385 >ref|ZP_08460179.1| outer membrane efflux protein [Psychrobacter sp. 1501(2011)] gb|EGK14913.1| outer membrane efflux protein [Psychrobacter sp. 1501(2011)] Length = 523 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 208/422 (49%), Gaps = 36/422 (8%) Query: 26 LMLAVSL-AACSLPAQS------ITLGQLVQQAALNNPAALARQRAVEAAAESVSSARWQ 78 L+LA+SL C+LP + + + L+ QA +P + + +A E +++A+ Sbjct: 10 LLLALSLMVGCTLPTYANTVVTDVQINSLISQAIETHPLVGSARAEQQATTEGINAAKLN 69 Query: 79 FFPTPSMSVERAGVTSSRDISYNGDDTVVTLRLQQTLWSGGRLTAQLEQAGHNHESAGEA 138 PTPS+S N DD V + ++Q LW+GGRLTA + QA + ++A E Sbjct: 70 LLPTPSISTSYG----------NNDDIVSEIGIRQPLWTGGRLTANVNQAIFDDKAATEN 119 Query: 139 LREQRFRLAEQVISQYSLWVRSDLATEANQKNLKALEDFLAQSQRREKEGAAARVDVTLV 198 + EQ+ ++A+ I + ++ + + + L F A QRR +G +AR+++ LV Sbjct: 120 IYEQQNQVAKTTIEAWQTYIAAVAQQRVYLETIDQLRKFEAMMQRRVSQGVSARIELDLV 179 Query: 199 RGRRDQALTDLLGAKASRQSARLQLEQLVG--LPLSDEE-------LRADVAKMSVSEDL 249 R Q A+ + A +L+Q+ G LP E L K S + Sbjct: 180 TNRILQETNAYEAAREQQHIAEARLQQITGRALPRGSEHNVPQLNLLVDQAKKASAGFEK 239 Query: 250 PALTESMLESSPLLKRL-RADAKVQESAIQIRSASYWPEVYARLEHQRGNFSVPHTPNAN 308 A +E+ + ++K + + ++ QE ++ +SA+ +P VYA +H + H N + Sbjct: 240 LAFSEASFYNPTVVKEMFQIESAKQE--VKAQSATRYPTVYAEYKH-----TYDHDTNED 292 Query: 309 --RAFIGMQMQLGAGLSLGSEVAAAQGRYQSALLAVDAARLELISQIAATYTEYQQAEAR 366 + ++G+ Q GAG S + A++ R S + +AA+ +++ I Y ++ A +R Sbjct: 293 DGQFYVGLNYQPGAGFSNLALTRASEARVNSLIQNKEAAQRQVMENIQIQYQQFASARSR 352 Query: 367 ARNLEDVAVSSEEVLASYTRQYLSGRRSWLDVMNAAREVVQTDLQKADVTAMIIADGRKL 426 +L ++ VL SY RQ+++GR+SWL+V+N+ RE+ + + I+ KL Sbjct: 353 ELSLVSAVAGAQIVLDSYQRQFIAGRKSWLEVLNSVRELSDYQINLVQTRSDILGSFYKL 412 Query: 427 QL 428 Q+ Sbjct: 413 QV 414