BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3656.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776432.1| transporter transmembrane protein [Herbaspir... 607 e-171 ref|YP_004750927.1| putative transporter [Collimonas fungivorans... 575 e-162 ref|YP_003675169.1| major facilitator superfamily protein [Methy... 503 e-140 ref|NP_767358.1| transporter [Bradyrhizobium japonicum USDA 110]... 422 e-116 ref|ZP_03629932.1| major facilitator superfamily MFS_1 [bacteriu... 390 e-106 >ref|YP_003776432.1| transporter transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64524.1| transporter transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 421 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 341/383 (89%), Positives = 361/383 (94%) Query: 1 MLMSPLGAVIMPAMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYSGFV 60 MLMSPLGA+IMP+MQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFY GFV Sbjct: 39 MLMSPLGALIMPSMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYGGFV 98 Query: 61 LGTVWCGLAQSFESLLIARIVTGLFGGVIGSITLAIATDLFAPQLRGRVMGIIQTAFAAS 120 LGTVWCGLAQSFESLL+ARIVTGLFGGVIGSITLAIATDLFAP LRGRVMG+IQT+FAAS Sbjct: 99 LGTVWCGLAQSFESLLLARIVTGLFGGVIGSITLAIATDLFAPHLRGRVMGVIQTSFAAS 158 Query: 121 QVLGIPIGLYLSNTWNWHVPFLAMAALGAVGGIVVSFKMQPVDGHLKLKQEHTAWMHLYH 180 QVLGIPIGLYLSN WNWHVPFLAMAALG GG+VV +MQPVDGHL LKQEH+AWMHLYH Sbjct: 159 QVLGIPIGLYLSNRWNWHVPFLAMAALGLAGGLVVLVRMQPVDGHLTLKQEHSAWMHLYH 218 Query: 181 TITEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDLHHLPTVYLVTGLCTIAFGPL 240 T+ EPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGID+ HLPT+YLVTGLCTIAFGPL Sbjct: 219 TLAEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDMAHLPTIYLVTGLCTIAFGPL 278 Query: 241 IGRAADKVGKFRVFVFGAVLSIIMVLIYTHLGPVTVPMIVLVNAVLFLGIFSRMIPFQAL 300 IGRAADK+GK RVF+FGAVLSIIMVLIYTHLG VTVPMIV VNAVLFLGIFSRMIPFQAL Sbjct: 279 IGRAADKLGKLRVFLFGAVLSIIMVLIYTHLGRVTVPMIVAVNAVLFLGIFSRMIPFQAL 338 Query: 301 VSSVPATTQRGSFNAISASIQQLSGGVASIVAGHIVTLGADGRLQHFDVVGYVIVGTTLL 360 VSSVPA TQRGSFNAISASIQQLSGGVAS++AGHIVTL DGRL HFD+VG+VIVGTTLL Sbjct: 339 VSSVPAATQRGSFNAISASIQQLSGGVASVIAGHIVTLAPDGRLGHFDIVGFVIVGTTLL 398 Query: 361 ASVLVWRLNRDVQARAAILAAAA 383 ASVLVWRL+RD+QAR + A A Sbjct: 399 ASVLVWRLHRDLQARESAAATPA 421 >ref|YP_004750927.1| putative transporter [Collimonas fungivorans Ter331] gb|AEK60104.1| putative transporter [Collimonas fungivorans Ter331] Length = 489 Score = 575 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 299/370 (80%), Positives = 339/370 (91%) Query: 1 MLMSPLGAVIMPAMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYSGFV 60 MLMSPLGAVIMPA+ I P+QFGLVVSAYAFSAG SGLLTAGFADRFDRK+LLLFFY+GF+ Sbjct: 106 MLMSPLGAVIMPALAIGPKQFGLVVSAYAFSAGLSGLLTAGFADRFDRKKLLLFFYTGFI 165 Query: 61 LGTVWCGLAQSFESLLIARIVTGLFGGVIGSITLAIATDLFAPQLRGRVMGIIQTAFAAS 120 LGT+WCGLAQSFESLL+ARIVTGLFGGVIGS+ LAI+TDLF Q+RGRVMG+IQTAFAAS Sbjct: 166 LGTLWCGLAQSFESLLLARIVTGLFGGVIGSVVLAISTDLFPLQMRGRVMGLIQTAFAAS 225 Query: 121 QVLGIPIGLYLSNTWNWHVPFLAMAALGAVGGIVVSFKMQPVDGHLKLKQEHTAWMHLYH 180 QVLGIPIGLYLSN W+WHVPF+AMAALG VGG+ V+++MQPV HL QEH+ WMHL+H Sbjct: 226 QVLGIPIGLYLSNRWDWHVPFMAMAALGVVGGLFVTWRMQPVTAHLAAPQEHSPWMHLFH 285 Query: 181 TITEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDLHHLPTVYLVTGLCTIAFGPL 240 T+TEPRYL AFATTALL TGGFMLMPFSSAY V NLGIDLH LPTVYLVTGLCTI FGP+ Sbjct: 286 TVTEPRYLMAFATTALLTTGGFMLMPFSSAYAVSNLGIDLHSLPTVYLVTGLCTIFFGPM 345 Query: 241 IGRAADKVGKFRVFVFGAVLSIIMVLIYTHLGPVTVPMIVLVNAVLFLGIFSRMIPFQAL 300 IG+AAD GKFRVF+ G LSI+MVLIYTHLGP ++P++++VNA +F+GIFSRMIPFQAL Sbjct: 346 IGKAADTFGKFRVFILGTALSILMVLIYTHLGPTSLPLLIVVNAFMFVGIFSRMIPFQAL 405 Query: 301 VSSVPATTQRGSFNAISASIQQLSGGVASIVAGHIVTLGADGRLQHFDVVGYVIVGTTLL 360 VSSVPATTQRGSFNAISASIQQLSGG+AS+VAGHIVTLGADG+LQHFD VGYV+VGT+L+ Sbjct: 406 VSSVPATTQRGSFNAISASIQQLSGGIASVVAGHIVTLGADGKLQHFDTVGYVVVGTSLV 465 Query: 361 ASVLVWRLNR 370 A +L+WRL R Sbjct: 466 ALMLLWRLQR 475 >ref|YP_003675169.1| major facilitator superfamily protein [Methylotenera versatilis 301] gb|ADI30592.1| major facilitator superfamily MFS_1 [Methylotenera versatilis 301] Length = 419 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 264/383 (68%), Positives = 330/383 (86%) Query: 1 MLMSPLGAVIMPAMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYSGFV 60 M+MSPLGA+IMPAM+I+P+QFGL+VSAYAFSAG SGLL AGFADR+DRK++LL FY+GFV Sbjct: 35 MIMSPLGALIMPAMEISPRQFGLIVSAYAFSAGISGLLMAGFADRYDRKKILLVFYTGFV 94 Query: 61 LGTVWCGLAQSFESLLIARIVTGLFGGVIGSITLAIATDLFAPQLRGRVMGIIQTAFAAS 120 TVWCGLAQ+F LL+ARIVTG+FGGVIGS+ LAIATDLFAPQLRGRVMG+IQTAFAAS Sbjct: 95 AATVWCGLAQTFPMLLLARIVTGIFGGVIGSVVLAIATDLFAPQLRGRVMGVIQTAFAAS 154 Query: 121 QVLGIPIGLYLSNTWNWHVPFLAMAALGAVGGIVVSFKMQPVDGHLKLKQEHTAWMHLYH 180 QVLG+P+GLYLSN W WH PFLAMAA GA+GGI++ ++MQPV GHLK QEH+A+ HL + Sbjct: 155 QVLGLPVGLYLSNRWTWHAPFLAMAAFGAIGGIIIVWRMQPVVGHLKAPQEHSAFTHLLN 214 Query: 181 TITEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDLHHLPTVYLVTGLCTIAFGPL 240 T+++PR+LTAFATTALL TGGFMLMPFSS + V NLG+ + HLPT+YL+TGLCTI GPL Sbjct: 215 TLSDPRHLTAFATTALLTTGGFMLMPFSSVFTVNNLGVSIEHLPTIYLITGLCTIFVGPL 274 Query: 241 IGRAADKVGKFRVFVFGAVLSIIMVLIYTHLGPVTVPMIVLVNAVLFLGIFSRMIPFQAL 300 +G+ ADK GK VF+ G+++++IMV+IYTHLG V +++VN ++F+GIFSRMIPFQAL Sbjct: 275 VGKVADKFGKIPVFMAGSIVTMIMVMIYTHLGTVPFTTVIIVNVLMFIGIFSRMIPFQAL 334 Query: 301 VSSVPATTQRGSFNAISASIQQLSGGVASIVAGHIVTLGADGRLQHFDVVGYVIVGTTLL 360 V+SVP TT+RGSFNA+SASIQQ +GG ASI+AGHIV +GADG+LQHF VGY++VGTT++ Sbjct: 335 VTSVPETTKRGSFNAVSASIQQFAGGFASILAGHIVAIGADGKLQHFPWVGYIVVGTTIV 394 Query: 361 ASVLVWRLNRDVQARAAILAAAA 383 ++L W + + +Q RA + AA Sbjct: 395 TAILTWFIQQGIQKRAQPIPDAA 417 >ref|NP_767358.1| transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC45983.1| bll0718 [Bradyrhizobium japonicum USDA 110] Length = 423 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 231/377 (61%), Positives = 294/377 (77%) Query: 1 MLMSPLGAVIMPAMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYSGFV 60 ++MSPLGA++MPA+ IT QFG+ VSAYAFSAG SG+L AGFADRFDRKRLLLFFY GF Sbjct: 43 IIMSPLGAILMPALDITATQFGVAVSAYAFSAGLSGILAAGFADRFDRKRLLLFFYVGFT 102 Query: 61 LGTVWCGLAQSFESLLIARIVTGLFGGVIGSITLAIATDLFAPQLRGRVMGIIQTAFAAS 120 LGT+ C +AQ++ LL+ RIVTGLFGGVIGS+ LAI TDLF LRGRVMG +QTAFAAS Sbjct: 103 LGTLLCAMAQTYHVLLLGRIVTGLFGGVIGSVVLAIITDLFPLHLRGRVMGFVQTAFAAS 162 Query: 121 QVLGIPIGLYLSNTWNWHVPFLAMAALGAVGGIVVSFKMQPVDGHLKLKQEHTAWMHLYH 180 QVLGIP GL+L+N WNWHV F A+ L +++F M+PVD HL+LKQ+ + HL Sbjct: 163 QVLGIPAGLFLANHWNWHVCFAAIVGLSIAAIAIIAFAMEPVDAHLRLKQDRNPFHHLIA 222 Query: 181 TITEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDLHHLPTVYLVTGLCTIAFGPL 240 T+ + RY AFA T LL TGG+MLMPFSSAY V NLGID+ HLPT+YLV+GL +I GPL Sbjct: 223 TVAQKRYTLAFAVTTLLATGGYMLMPFSSAYTVNNLGIDMLHLPTIYLVSGLFSIVTGPL 282 Query: 241 IGRAADKVGKFRVFVFGAVLSIIMVLIYTHLGPVTVPMIVLVNAVLFLGIFSRMIPFQAL 300 +GRA+D GK+ FVFG+V+S+IMVLIYTHLG V++ +LVN ++F+GIFSRMIP QAL Sbjct: 283 VGRASDAFGKYPTFVFGSVVSVIMVLIYTHLGHVSLATAILVNVLMFVGIFSRMIPSQAL 342 Query: 301 VSSVPATTQRGSFNAISASIQQLSGGVASIVAGHIVTLGADGRLQHFDVVGYVIVGTTLL 360 +S++P +QRGSF+AISAS+QQLSGG+ S++AG I+ DG L HFD +GYV+V + ++ Sbjct: 343 MSAIPDPSQRGSFSAISASLQQLSGGLGSMLAGAIIAQAPDGSLIHFDRIGYVVVASAIV 402 Query: 361 ASVLVWRLNRDVQARAA 377 + V ++ + + V RA Sbjct: 403 SLVAMYFVQKAVAERAG 419 >ref|ZP_03629932.1| major facilitator superfamily MFS_1 [bacterium Ellin514] gb|EEF59711.1| major facilitator superfamily MFS_1 [bacterium Ellin514] Length = 421 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 213/395 (53%), Positives = 293/395 (74%), Gaps = 4/395 (1%) Query: 1 MLMSPLGAVIMPAMQITPQQFGLVVSAYAFSAGASGLLTAGFADRFDRKRLLLFFYSGFV 60 M++SPLGA+++ ++I +FGLVVS YAFSAG SGLLTAGFAD+FDRK+LLLFFY+GF+ Sbjct: 26 MILSPLGAMLLEELKIPTTKFGLVVSVYAFSAGVSGLLTAGFADKFDRKKLLLFFYTGFI 85 Query: 61 LGTVWCGLAQSFESLLIARIVTGLFGGVIGSITLAIATDLFAPQLRGRVMGIIQTAFAAS 120 LGTV CG+A ++ LLIARIVTGLFGGVIGSIT+AI DLFA ++RGRVMGI+QTAFAAS Sbjct: 86 LGTVLCGIASNYHFLLIARIVTGLFGGVIGSITMAITADLFALEMRGRVMGIVQTAFAAS 145 Query: 121 QVLGIPIGLYLSNTWNWHVPFLAMAALGAVGGIVVSFKMQPVDGHLKLKQEHTAWMHLYH 180 QV+G+P+GL+LSN W WH PFL +A +G G+V++ ++P+D HLK+K + A+ HL+ Sbjct: 146 QVMGLPMGLFLSNHWGWHAPFLMIAGIGTAVGVVIAIGLKPIDAHLKIKNDRNAFEHLFK 205 Query: 181 TITEPRYLTAFATTALLMTGGFMLMPFSSAYLVGNLGIDLHHLPTVYLVTGLCTIAFGPL 240 T+ P YL AFA T +L TGGFMLMPF S + V NLGI + LP +Y+VTG C I GPL Sbjct: 206 TVLRPNYLRAFAATVVLATGGFMLMPFGSTFTVHNLGISMDKLPMIYMVTGTCAIIAGPL 265 Query: 241 IGRAADKVGKFRVFVFGAVLSIIMVLIYTHLGPVTVPMIVLVNAVLFLGIFSRMIPFQAL 300 IGR +D +GK+ VF G+VL +IMV+IY +LG + ++LV+ +LF+ I +RMI AL Sbjct: 266 IGRLSDAIGKYPVFFMGSVLGMIMVVIYCNLGITPLWAVILVSVLLFIAISARMISISAL 325 Query: 301 VSSVPATTQRGSFNAISASIQQLSGGVASIVAGHIVTLGADGRLQHFDVVGYVIVGTTLL 360 +S+VP RG+F +++AS QQ +GG+AS +AG IV G+L+ + ++GYV+V L+ Sbjct: 326 ISAVPDMKDRGAFMSVNASTQQFAGGIASALAGLIVVQNQSGKLERYGLLGYVVVCAMLV 385 Query: 361 ASVLVWRLNRDVQARAAIL----AAAAQASPANAA 391 L++ +++ VQA+A + AA +A PA+ Sbjct: 386 TLGLMYSIHKMVQAKAKAMPTAEAAGKEAVPASTG 420