BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3651.p (518 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 632 e-179 ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 494 e-137 ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transduce... 462 e-128 ref|YP_003774686.1| methyl-accepting chemotaxis protein I [Herba... 447 e-123 ref|YP_003278243.1| methyl-accepting chemotaxis sensory transduc... 429 e-118 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 408/484 (84%), Positives = 438/484 (90%) Query: 1 MNILGNMNIGKRLTLGFAVILAFSAIVAGISLWRLEQVSTATREMMNDPLKTERLMGDWY 60 MNI+GNMNIG+RLTLGFA+IL FS I+AGI LWRL+ V+ ATREMM +PLKTERLM DWY Sbjct: 1 MNIIGNMNIGRRLTLGFALILTFSIIIAGIGLWRLDHVAQATREMMAEPLKTERLMADWY 60 Query: 61 TNLTAGIRRTLAIAKSSDPSLAAYFAEEAAASTKSSSEYQKQVEGLLVTPEEKALFQKIG 120 TNL AGIRRT+AIAKSSDP+L YFA E AAS+KSS EYQKQVE LL TPEEKALFQKIG Sbjct: 61 TNLVAGIRRTIAIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKIG 120 Query: 121 EQRKVYLSSRDQIVKLKAAGNVEEAMRLLETTFVPTAATYQKLMREMVDIQRKDIDDTAK 180 E RK+YLSSRD+I K KAAGN EEAMR+L+ FVP A YQ MR++VD QRK++DDTA+ Sbjct: 121 ELRKLYLSSRDEINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTAR 180 Query: 181 EIDNIAAQSRILIVVLEGLILLLGIVLARTLTLGITKPLQTAVVVSRKVAEGDLATQVQV 240 EID IAA+SR LI+VLEGLILLLGIV AR LTLGITKPL AV VSR VAEGDL++++ V Sbjct: 181 EIDAIAAKSRTLILVLEGLILLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEIAV 240 Query: 241 TSRDETGQLLQSLKDMNDSLRGIVANVRTGTDTISTASAEIAAGNLDLSGRTEQQASSLE 300 TSRDETGQLLQSLKDMN SLRGIV+NVR+GTDTISTAS+EIAAGNLDLS RTEQQASSL Sbjct: 241 TSRDETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNLDLSSRTEQQASSLA 300 Query: 301 ETASAMEELISTVRQNADNARQASQLAQSASSVAEQGGGVVSQVVDTMGAINASSRKIVD 360 ETASAMEELISTVRQNADNARQASQLA SAS+VAEQGGGVVSQVVDTMGAINASSRKIVD Sbjct: 301 ETASAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVDTMGAINASSRKIVD 360 Query: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELIND 420 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSASAAKEIKELIND Sbjct: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIND 420 Query: 421 SVEKVGDGSRLVEQAGVTMQEVVSSVRHVTDIVAEISAASAEQTSGIEQINLAITQMDQV 480 SV KV DGSRLVEQAG TMQEVVSSVR VTDIVAEISAAS EQT GIEQINLAITQMDQV Sbjct: 421 SVGKVDDGSRLVEQAGNTMQEVVSSVRRVTDIVAEISAASTEQTHGIEQINLAITQMDQV 480 Query: 481 TQQN 484 TQQN Sbjct: 481 TQQN 484 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 310/490 (63%), Positives = 377/490 (76%) Query: 1 MNILGNMNIGKRLTLGFAVILAFSAIVAGISLWRLEQVSTATREMMNDPLKTERLMGDWY 60 M I +M IGKRL GFAV+LAF+ ++ GI +W+L + ATREM +PL ERL+ DW Sbjct: 1 MKIFASMKIGKRLGFGFAVVLAFAVLITGIGVWQLNALGNATREMTREPLAKERLISDWS 60 Query: 61 TNLTAGIRRTLAIAKSSDPSLAAYFAEEAAASTKSSSEYQKQVEGLLVTPEEKALFQKIG 120 N+ + RT A+AKSSDPSL +F+ AA TKS+S KQ+E LL + EEK LF K+ Sbjct: 61 RNINVAVIRTTAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVS 120 Query: 121 EQRKVYLSSRDQIVKLKAAGNVEEAMRLLETTFVPTAATYQKLMREMVDIQRKDIDDTAK 180 + RK YLSSRDQ+ KLKA G +EA RLLE+T++P A Y KL+ E + +QRK++D A Sbjct: 121 DVRKAYLSSRDQVTKLKADGQADEANRLLESTYIPAADNYMKLVSEFLGLQRKNLDAKAV 180 Query: 181 EIDNIAAQSRILIVVLEGLILLLGIVLARTLTLGITKPLQTAVVVSRKVAEGDLATQVQV 240 EI I SR +V L L+L G++ A LT+GIT PL AV V+R+VA+GDLAT +Q Sbjct: 181 EISGIETTSRNYLVALAALVLTFGVICAWLLTVGITGPLTNAVAVARRVADGDLATDIQT 240 Query: 241 TSRDETGQLLQSLKDMNDSLRGIVANVRTGTDTISTASAEIAAGNLDLSGRTEQQASSLE 300 +DET QLLQ+L M D+L IV NVR G++ ++TASAEIA GN DLS RTEQQAS+LE Sbjct: 241 EGKDETAQLLQALSAMKDNLARIVGNVRQGSEGVATASAEIAQGNNDLSARTEQQASALE 300 Query: 301 ETASAMEELISTVRQNADNARQASQLAQSASSVAEQGGGVVSQVVDTMGAINASSRKIVD 360 ETA++MEEL +TVRQNADNARQA+QLAQSAS+VA +GG VVS+VV+TM IN SS+KI D Sbjct: 301 ETAASMEELSATVRQNADNARQANQLAQSASTVAIKGGEVVSRVVETMKGINDSSKKISD 360 Query: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELIND 420 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK LIND Sbjct: 361 IIQVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKGLIND 420 Query: 421 SVEKVGDGSRLVEQAGVTMQEVVSSVRHVTDIVAEISAASAEQTSGIEQINLAITQMDQV 480 SV++V GS LV+QAGVTM EVVSS+R VTDI+ EISAAS EQ+ G+ Q++ A+TQMDQV Sbjct: 421 SVQRVEQGSTLVDQAGVTMTEVVSSIRRVTDIMGEISAASTEQSQGVAQVSEAVTQMDQV 480 Query: 481 TQQNAALVEQ 490 TQQNAALVE+ Sbjct: 481 TQQNAALVEE 490 >ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] gb|EER57813.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] Length = 527 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 293/481 (60%), Positives = 366/481 (76%) Query: 4 LGNMNIGKRLTLGFAVILAFSAIVAGISLWRLEQVSTATREMMNDPLKTERLMGDWYTNL 63 + N+ IG RL GFA++LA ++ LWRL+ V+ AT +M PL ER++ DWY + Sbjct: 1 MKNLKIGTRLGGGFALVLALMVLMTLFGLWRLQTVAQATNDMTQQPLAMERMISDWYRYV 60 Query: 64 TAGIRRTLAIAKSSDPSLAAYFAEEAAASTKSSSEYQKQVEGLLVTPEEKALFQKIGEQR 123 +G RRT AI KS+DPSLA +FAE+AA ST+ S + Q ++E LL P EK L+ I + R Sbjct: 61 YSGARRTTAIVKSTDPSLAGFFAEDAAMSTRESGKLQDRIEPLLSNPAEKELWVTIKKAR 120 Query: 124 KVYLSSRDQIVKLKAAGNVEEAMRLLETTFVPTAATYQKLMREMVDIQRKDIDDTAKEID 183 YLSSRDQ VK KA G +EEA R L ++P A Y L+++++D+QR ID TAK+I Sbjct: 121 VTYLSSRDQAVKAKADGQLEEAERTLTQVYLPAAEKYMALIQQLLDLQRASIDATAKDIQ 180 Query: 184 NIAAQSRILIVVLEGLILLLGIVLARTLTLGITKPLQTAVVVSRKVAEGDLATQVQVTSR 243 + A+SR+ +++L L + +G V A LT GIT+PL AV V+R VA+ DL T V+V SR Sbjct: 181 GVYAESRMWLMLLCVLAVAVGGVCAWWLTHGITRPLSEAVRVARAVADNDLTTTVEVHSR 240 Query: 244 DETGQLLQSLKDMNDSLRGIVANVRTGTDTISTASAEIAAGNLDLSGRTEQQASSLEETA 303 DETGQL+++L+ MN SL +V VR GT+ I+TAS +I AGN DLS RTEQQASSLEETA Sbjct: 241 DETGQLMEALQHMNTSLAQVVGRVRAGTEGIATASNQIDAGNQDLSSRTEQQASSLEETA 300 Query: 304 SAMEELISTVRQNADNARQASQLAQSASSVAEQGGGVVSQVVDTMGAINASSRKIVDIIS 363 ++MEEL STVRQNADNARQA+QLA SAS VA QGG VV+ VVDTM AINASSRKI DII Sbjct: 301 ASMEELTSTVRQNADNARQANQLASSASQVAMQGGQVVAHVVDTMSAINASSRKIADIIG 360 Query: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELINDSVE 423 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA+AAK+IK LI++SV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKDIKTLIDNSVG 420 Query: 424 KVGDGSRLVEQAGVTMQEVVSSVRHVTDIVAEISAASAEQTSGIEQINLAITQMDQVTQQ 483 KV +G++ V +AG TM +V SV+ VTDI+AEI+AAS EQ+SGI+Q++ AI+QMDQVTQQ Sbjct: 421 KVDEGTQQVAEAGKTMDAIVDSVKRVTDIMAEIAAASQEQSSGIDQVHQAISQMDQVTQQ 480 Query: 484 N 484 N Sbjct: 481 N 481 >ref|YP_003774686.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ62778.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] Length = 541 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 303/487 (62%), Positives = 370/487 (75%), Gaps = 3/487 (0%) Query: 1 MNILGNMNIGKRLTLGFAVILAFSAIVAGISLWRLEQVSTATREMMNDPLKTERLMGDWY 60 M NM IG+RL LGFAVILA +++V +S+WRL+ ++ AT EMM++PL ERL+ DWY Sbjct: 1 MRYFANMKIGRRLALGFAVILAAASVVVALSIWRLQGIAAATDEMMHEPLTKERLVSDWY 60 Query: 61 TNLTAGIRRTLAIAKSSDPSLAAYFAEEAAASTKSSSEYQKQVEGLLVTPEEKALFQKIG 120 + +RRT AIAKSSDPSLAA+FA++AAA+++ S+E QK +E L+ + +EKA+F K+G Sbjct: 61 RTIHTSVRRTTAIAKSSDPSLAAFFADDAAAASRMSTEQQKAIEALIESDQEKAVFTKLG 120 Query: 121 EQRKVYLSSRDQIVKLKAAGNVEEAMRLLETTFVPTAATYQKLMREMVDIQRKDIDDTAK 180 E RK Y+ RD I K KA G EEA ++L F Y L+++++ +QR +ID A Sbjct: 121 EVRKDYIKYRDAISKAKAEGRTEEAAQILAGPFDVAGKGYLDLLQQLLTLQRANIDQVAA 180 Query: 181 EIDNIAAQSRILIVVLEGLILLLGIVLARTLTLGITKPLQTAVVVSRKVAEGDLATQVQ- 239 I + +SR L++ L L ++LG + ARTL LGIT+PL+ AV V+ VA GDL ++ Sbjct: 181 HIQTVYRESRNLMLALAFLQVVLGWLFARTLALGITRPLEQAVEVAEAVAAGDLTHRIDE 240 Query: 240 --VTSRDETGQLLQSLKDMNDSLRGIVANVRTGTDTISTASAEIAAGNLDLSGRTEQQAS 297 DETG+L+ +L M +L IV VR GTD I+TAS EIA GNLDLS RTE+QA Sbjct: 241 RLAARGDETGKLMHALHAMTGNLARIVGQVRGGTDAIATASKEIATGNLDLSARTERQAG 300 Query: 298 SLEETASAMEELISTVRQNADNARQASQLAQSASSVAEQGGGVVSQVVDTMGAINASSRK 357 +LEETASAMEEL STV QNADNARQA+QLA SASSVA+QGG VVSQV+ TMG+IN SSRK Sbjct: 301 ALEETASAMEELTSTVSQNADNARQANQLAASASSVAQQGGEVVSQVISTMGSINESSRK 360 Query: 358 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKEL 417 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIK L Sbjct: 361 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKAL 420 Query: 418 INDSVEKVGDGSRLVEQAGVTMQEVVSSVRHVTDIVAEISAASAEQTSGIEQINLAITQM 477 I+DSV KVG GS LV +AG TM EVV+SVR V DIV+EISAAS+EQ+ GI Q+NLAIT M Sbjct: 421 IDDSVAKVGSGSELVTRAGSTMDEVVASVRQVADIVSEISAASSEQSDGISQVNLAITDM 480 Query: 478 DQVTQQN 484 DQ TQQN Sbjct: 481 DQTTQQN 487 >ref|YP_003278243.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni CNB-2] gb|ACY32947.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni CNB-2] Length = 529 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 294/488 (60%), Positives = 371/488 (76%) Query: 4 LGNMNIGKRLTLGFAVILAFSAIVAGISLWRLEQVSTATREMMNDPLKTERLMGDWYTNL 63 L +NIG RL LGFAV+LAF+ ++ I +W+L V AT++MM +PL ERL+ DW +N+ Sbjct: 16 LTKLNIGARLGLGFAVVLAFAVVITVIGIWQLHSVGKATQQMMQEPLTKERLISDWNSNV 75 Query: 64 TAGIRRTLAIAKSSDPSLAAYFAEEAAASTKSSSEYQKQVEGLLVTPEEKALFQKIGEQR 123 + + RT AIAKSSD SL + A +AAA+TKS++ KQ+E L+ P E+ + KI + R Sbjct: 76 SVAVARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLITQPAEREILDKIMQVR 135 Query: 124 KVYLSSRDQIVKLKAAGNVEEAMRLLETTFVPTAATYQKLMREMVDIQRKDIDDTAKEID 183 K Y++SRD++ +LKA G EEA L ++VP A Y KL+ E++++QR +D A E++ Sbjct: 136 KTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVE 195 Query: 184 NIAAQSRILIVVLEGLILLLGIVLARTLTLGITKPLQTAVVVSRKVAEGDLATQVQVTSR 243 I + SR +VL L L +G V A LT GIT PL+ AV V+R+VA+GDL ++ V+S Sbjct: 196 QIESSSRTYFLVLALLALAIGTVSAWRLTQGITAPLKHAVSVARRVADGDLTARIHVSSS 255 Query: 244 DETGQLLQSLKDMNDSLRGIVANVRTGTDTISTASAEIAAGNLDLSGRTEQQASSLEETA 303 DETGQL+Q+L DMN SL +V VR GTD+I+TAS +IAAGN DLS RTE+QASSL++TA Sbjct: 256 DETGQLMQALHDMNTSLDRLVGQVRQGTDSIATASGQIAAGNHDLSARTEEQASSLQQTA 315 Query: 304 SAMEELISTVRQNADNARQASQLAQSASSVAEQGGGVVSQVVDTMGAINASSRKIVDIIS 363 ++ME+L STV+QNADNA QA+QLA SAS VA +GG VVSQVV+TMGAI+ SSRKI DII Sbjct: 316 ASMEQLTSTVKQNADNASQANQLALSASDVAVKGGMVVSQVVETMGAISQSSRKISDIIG 375 Query: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELINDSVE 423 VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK+LI SV Sbjct: 376 VIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSAEAAKEIKQLIQASVT 435 Query: 424 KVGDGSRLVEQAGVTMQEVVSSVRHVTDIVAEISAASAEQTSGIEQINLAITQMDQVTQQ 483 KV +GS V QAG TM E+VSSV+ VTDI+ EI+AAS EQTSGIEQIN A+ +MD VTQQ Sbjct: 436 KVEEGSAQVSQAGQTMDEIVSSVQRVTDIMGEITAASHEQTSGIEQINRAVAEMDLVTQQ 495 Query: 484 NAALVEQA 491 NAALVE++ Sbjct: 496 NAALVEES 503