BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3643.p (333 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002234686.1| hypothetical protein BCAM2083 [Burkholderia ... 124 2e-26 ref|ZP_04943483.1| hypothetical protein BCPG_05047 [Burkholderia... 124 2e-26 ref|NP_522854.1| hypothetical protein RS05340 [Ralstonia solanac... 124 2e-26 ref|YP_623343.1| hypothetical protein Bcen_3476 [Burkholderia ce... 124 2e-26 ref|YP_371577.1| hypothetical protein Bcep18194_B0819 [Burkholde... 124 3e-26 >ref|YP_002234686.1| hypothetical protein BCAM2083 [Burkholderia cenocepacia J2315] emb|CAR55941.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 505 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 1 MWTVTCPSCQKFVEFHSLASTMAVCVYCRAVVDRRNQKTRGVSRMRALAKGAGPLPIGRT 60 M+ +CP C VEF S A+ MAVC +CR+ + +R + + + A P+ IG Sbjct: 1 MFRTSCPQCGAPVEFRSAAAVMAVCAFCRSTLLKRGADVERIGELATVLDDASPIQIGTA 60 Query: 61 GCFEGRAFSIVGQRQWRADARVWNQWWLKMQGDSLEWRLLEAGGRYAIVSRVDLE---QA 117 G ++ RAF+++G+ Q DA W++W++ + W L +A G+YAI R + +A Sbjct: 61 GRYDKRAFTVLGRIQMTYDAGAWSEWYVVFDDGAFGW-LSDASGQYAITVREPDDASGRA 119 Query: 118 LQRFDQLKPRMRVKLFDRSWVVSAVRDVACSGGEGEWAMTRSARQRARMVDLEAGDGVLM 177 FD L+P MR+ R+++VS VR C+GG+GE A AR+ DL G+ Sbjct: 120 WPAFDTLEPGMRIDHGGRAYLVSDVRTARCTGGDGELPFRVDAGWEARVADLRTGNAFAT 179 Query: 178 LDYS----LGDTPVLYLGKRMALEAL 199 DYS G P +Y+G+ + +AL Sbjct: 180 YDYSDAEPNGGIPAVYVGEALEFDAL 205 >ref|ZP_04943483.1| hypothetical protein BCPG_05047 [Burkholderia cenocepacia PC184] gb|EAY66654.1| hypothetical protein BCPG_05047 [Burkholderia cenocepacia PC184] Length = 505 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 1 MWTVTCPSCQKFVEFHSLASTMAVCVYCRAVVDRRNQKTRGVSRMRALAKGAGPLPIGRT 60 M+ +CP C VEF S A+ MAVC +CR+ + +R + + + + A P+ IG T Sbjct: 1 MFRTSCPQCGAPVEFRSAAAVMAVCAFCRSTLLKRGAEVERIGELATVLDDASPIQIGTT 60 Query: 61 GCFEGRAFSIVGQRQWRADARVWNQWWLKMQGDSLEWRLLEAGGRYAIVSRVDLE---QA 117 G + RAF+++G+ Q DA W++W++ + W L +A G+YAI R + A Sbjct: 61 GRYGKRAFTVLGRIQMTYDAGAWSEWYVVFDDGAFGW-LSDASGQYAITVREPDDASGTA 119 Query: 118 LQRFDQLKPRMRVKLFDRSWVVSAVRDVACSGGEGEWAMTRSARQRARMVDLEAGDGVLM 177 FD L+P MR+ R+++VS VR C+GG+GE A AR+ DL G+ Sbjct: 120 WPAFDTLEPGMRIDHRGRAYLVSDVRTARCTGGDGELPFRVDAGWEARVADLRTGNAFAT 179 Query: 178 LDY----SLGDTPVLYLGKRMALEAL 199 DY S G +P +Y G+ + +AL Sbjct: 180 YDYSDAGSNGGSPAVYAGEALEFDAL 205 >ref|NP_522854.1| hypothetical protein RS05340 [Ralstonia solanacearum GMI1000] emb|CAD18446.1| probable transmembrane protein [Ralstonia solanacearum GMI1000] Length = 482 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 1/199 (0%) Query: 1 MWTVTCPSCQKFVEFHSLASTMAVCVYCRAVVDRRNQKTRGVSRMRALAKGAGPLPIGRT 60 M+ CP+C VE S A+ MAVC +C++ + R + + + +M A+ + + IG T Sbjct: 1 MFHANCPACGAPVELKSAAAVMAVCSFCKSTLLRDGETLKDIGKMSAVLEDYARVQIGTT 60 Query: 61 GCFEGRAFSIVGQRQWRADARVWNQWWLKMQGDSLEWRLLEAGGRYAIVSRVDLEQALQR 120 G ++GRAF+++G+ Q R DA WN+W+ S W L EA G+ + Sbjct: 61 GRYQGRAFTVIGRIQLRYDAGFWNEWYALFDDGSDGW-LAEASGQVTMTLASGRPADAVP 119 Query: 121 FDQLKPRMRVKLFDRSWVVSAVRDVACSGGEGEWAMTRSARQRARMVDLEAGDGVLMLDY 180 F+ L+P + +V+S VR+ C+GGEGE RAR+ D + D L LDY Sbjct: 120 FESLRPGQSYDADGKRFVLSDVREADCTGGEGELPFRVGQGWRARVADGRSKDAFLTLDY 179 Query: 181 SLGDTPVLYLGKRMALEAL 199 S G PVLYLG +L+AL Sbjct: 180 SDGTAPVLYLGVATSLKAL 198 >ref|YP_623343.1| hypothetical protein Bcen_3476 [Burkholderia cenocepacia AU 1054] ref|YP_838517.1| hypothetical protein Bcen2424_4890 [Burkholderia cenocepacia HI2424] ref|YP_001779013.1| hypothetical protein Bcenmc03_5396 [Burkholderia cenocepacia MC0-3] gb|ABF78370.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gb|ABK11624.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] gb|ACA94523.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 505 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 1 MWTVTCPSCQKFVEFHSLASTMAVCVYCRAVVDRRNQKTRGVSRMRALAKGAGPLPIGRT 60 M+ +CP C VEF S A+ MAVC +CR+ + +R + + + + A P+ IG Sbjct: 1 MFRTSCPQCGAPVEFRSAAAVMAVCAFCRSTLLKRGTEVERIGELATVLDDASPIQIGTA 60 Query: 61 GCFEGRAFSIVGQRQWRADARVWNQWWLKMQGDSLEWRLLEAGGRYAIVSRVDLEQ---A 117 G ++ RAF+++G+ Q DA W++W++ + W L +A G+YAI R + A Sbjct: 61 GRYDKRAFTVLGRIQMTYDAGAWSEWYVVFDDGAFGW-LSDASGQYAITVREPDDASGGA 119 Query: 118 LQRFDQLKPRMRVKLFDRSWVVSAVRDVACSGGEGEWAMTRSARQRARMVDLEAGDGVLM 177 FD L+P MR+ R+++VS VR C+GG+GE A AR+ DL G+ Sbjct: 120 WPAFDTLEPGMRIDHGGRAYLVSDVRTARCTGGDGELPFRVDAGWEARVADLRTGNAFAT 179 Query: 178 LDY----SLGDTPVLYLGKRMALEAL 199 DY S G +P +Y G+ + +AL Sbjct: 180 CDYSDAGSNGGSPAVYAGEALEFDAL 205 >ref|YP_371577.1| hypothetical protein Bcep18194_B0819 [Burkholderia sp. 383] gb|ABB10933.1| hypothetical protein Bcep18194_B0819 [Burkholderia sp. 383] Length = 505 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 1 MWTVTCPSCQKFVEFHSLASTMAVCVYCRAVVDRRNQKTRGVSRMRALAKGAGPLPIGRT 60 M++ +CP C VEF S A+ MAVC +CR+ + +R + + + A P+ IG Sbjct: 1 MFSTSCPQCGAPVEFRSAAAVMAVCAFCRSTLLKRGTDVERIGELATVLDDASPIQIGTA 60 Query: 61 GCFEGRAFSIVGQRQWRADARVWNQWWLKMQGDSLEWRLLEAGGRYAIVSRVDLEQ---A 117 G ++ RAF+++G+ Q DA W++W++ + W L +A G+YAI R + A Sbjct: 61 GRYDKRAFTVLGRIQMTYDAGAWSEWYVVFDDGTFGW-LSDASGQYAITVREPDDASGGA 119 Query: 118 LQRFDQLKPRMRVKLFDRSWVVSAVRDVACSGGEGEWAMTRSARQRARMVDLEAGDGVLM 177 F L+P MR+ R+++VS VR C+GG+GE A AR+VDL G+ Sbjct: 120 WPAFGTLEPGMRIDHGGRAFLVSDVRTARCTGGDGELPFRVDAGWEARVVDLRTGNAFAT 179 Query: 178 LDYSLGD----TPVLYLGKRMALEAL 199 DYS D +P +Y G+ + +AL Sbjct: 180 YDYSDADSNGGSPAVYTGEALEFDAL 205