BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3639.p (167 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776423.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate... 268 2e-70 ref|YP_001100185.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate ... 248 2e-64 ref|YP_001353100.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate... 248 3e-64 gb|AEG69028.1| 2c-methyl-d-erythritol 2,4-cyclodiphosphate synth... 238 2e-61 ref|ZP_00942955.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate ... 238 2e-61 >ref|YP_003776423.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64515.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 167 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 143/161 (88%), Positives = 148/161 (91%) Query: 4 SSPFPFRIGQGYDCHALVEGRPLILGGVTIPHKKGLLGHSDADALLHAITDALFGAAALG 63 S P FRIGQGYDCH LVEGRPLILGGVTIPH KGLLGHSDADALLHAITDALFGAAALG Sbjct: 2 SHPIAFRIGQGYDCHVLVEGRPLILGGVTIPHHKGLLGHSDADALLHAITDALFGAAALG 61 Query: 64 DIGRHFPDTDPQFKGADSRVLLREAAKRLAAAGYAVGNVDATIIAQAPKMAPHIPSMVAN 123 DIGRHFPDTDPQFKGADSRVLLREA KRLAAAGY VGNVDATIIAQAPKMAPHI +MV + Sbjct: 62 DIGRHFPDTDPQFKGADSRVLLREAGKRLAAAGYRVGNVDATIIAQAPKMAPHIGAMVIH 121 Query: 124 VAADLGISEGQVNIKAKTNEKMGFLGREEGIATEAVVLIHR 164 +A DLGIS QVN+KAKTNEKMGFLGREEGIATEAV LI+R Sbjct: 122 IAEDLGISPQQVNVKAKTNEKMGFLGREEGIATEAVALIYR 162 >ref|YP_001100185.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Herminiimonas arsenicoxydans] emb|CAL62061.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) (MECDP-synthase) [Herminiimonas arsenicoxydans] Length = 168 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 129/164 (78%), Positives = 145/164 (88%) Query: 3 ASSPFPFRIGQGYDCHALVEGRPLILGGVTIPHKKGLLGHSDADALLHAITDALFGAAAL 62 A+ PFRIGQGYDCHALVEGR LI+GGVTIPH GLLGHSDAD LLHAITDALFGAAAL Sbjct: 5 ATLSMPFRIGQGYDCHALVEGRKLIIGGVTIPHVTGLLGHSDADVLLHAITDALFGAAAL 64 Query: 63 GDIGRHFPDTDPQFKGADSRVLLREAAKRLAAAGYAVGNVDATIIAQAPKMAPHIPSMVA 122 GDIGRHFPDT +F GADSRVLLREAAKR+AAAG+ +GNVDATIIAQ PKMAPHI M+A Sbjct: 65 GDIGRHFPDTAVEFAGADSRVLLREAAKRVAAAGFYIGNVDATIIAQRPKMAPHITQMIA 124 Query: 123 NVAADLGISEGQVNIKAKTNEKMGFLGREEGIATEAVVLIHRQN 166 NVA DLG++ Q+NIKAKTNEK+G+LGREEGIA EAV LI++++ Sbjct: 125 NVAEDLGVAVNQINIKAKTNEKLGYLGREEGIAAEAVALIYQRS 168 >ref|YP_001353100.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Janthinobacterium sp. Marseille] gb|ABR89210.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Janthinobacterium sp. Marseille] Length = 168 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 129/164 (78%), Positives = 146/164 (89%) Query: 1 MNASSPFPFRIGQGYDCHALVEGRPLILGGVTIPHKKGLLGHSDADALLHAITDALFGAA 60 ++ ++ PFRIGQGYDCHALVEGR LI+GGVTIPH GLLGHSDAD LLHAITDALFGAA Sbjct: 3 VSQATALPFRIGQGYDCHALVEGRKLIIGGVTIPHSTGLLGHSDADVLLHAITDALFGAA 62 Query: 61 ALGDIGRHFPDTDPQFKGADSRVLLREAAKRLAAAGYAVGNVDATIIAQAPKMAPHIPSM 120 ALGDIGRHFPDT +F GADSRVLLREA KR+AAAGY +GNVDATIIAQ PKM PHIP+M Sbjct: 63 ALGDIGRHFPDTAVEFAGADSRVLLREAVKRVAAAGYRIGNVDATIIAQRPKMVPHIPTM 122 Query: 121 VANVAADLGISEGQVNIKAKTNEKMGFLGREEGIATEAVVLIHR 164 VA++AADLG++ QV+IKAKTNEK+G+LGREEGIA EAV LI+R Sbjct: 123 VAHIAADLGVAPDQVSIKAKTNEKLGYLGREEGIAAEAVALIYR 166 >gb|AEG69028.1| 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase [Ralstonia solanacearum Po82] Length = 168 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 124/155 (80%), Positives = 136/155 (87%) Query: 10 RIGQGYDCHALVEGRPLILGGVTIPHKKGLLGHSDADALLHAITDALFGAAALGDIGRHF 69 RIGQGYD HALVEGR LILGGV IPH +GLLGHSDADALLHAITDALFGAA LGDIGRHF Sbjct: 7 RIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHF 66 Query: 70 PDTDPQFKGADSRVLLREAAKRLAAAGYAVGNVDATIIAQAPKMAPHIPSMVANVAADLG 129 PDTDP F GADSRVLLREA +R+ AGYAVGNVDATIIAQ PK+APH+ MVAN+AADLG Sbjct: 67 PDTDPAFAGADSRVLLREAVRRVREAGYAVGNVDATIIAQRPKLAPHVAGMVANLAADLG 126 Query: 130 ISEGQVNIKAKTNEKMGFLGREEGIATEAVVLIHR 164 I+ G+ N+KAKTNEK+GF GREEGI +A VLI+R Sbjct: 127 IAPGRCNVKAKTNEKLGFEGREEGIVAQAAVLIYR 161 >ref|ZP_00942955.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Ralstonia solanacearum UW551] ref|YP_002259426.1| cd00554, mecdp synthase (2-c-methyl-d-erythritol-2,4-cyclodiphosphate synthase) protein [Ralstonia solanacearum IPO1609] gb|EAP74709.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Ralstonia solanacearum UW551] emb|CAQ61358.1| cd00554, mecdp synthase (2-c-methyl-d-erythritol-2,4-cyclodiphosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 168 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 124/155 (80%), Positives = 136/155 (87%) Query: 10 RIGQGYDCHALVEGRPLILGGVTIPHKKGLLGHSDADALLHAITDALFGAAALGDIGRHF 69 RIGQGYD HALVEGR LILGGV IPH +GLLGHSDADALLHAITDALFGAA LGDIGRHF Sbjct: 7 RIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHF 66 Query: 70 PDTDPQFKGADSRVLLREAAKRLAAAGYAVGNVDATIIAQAPKMAPHIPSMVANVAADLG 129 PDTDP F GADSRVLLREA +R+ AGYAVGNVDATIIAQ PK+APH+ MVAN+AADLG Sbjct: 67 PDTDPVFAGADSRVLLREAVRRVREAGYAVGNVDATIIAQRPKLAPHVAGMVANLAADLG 126 Query: 130 ISEGQVNIKAKTNEKMGFLGREEGIATEAVVLIHR 164 I+ G+ N+KAKTNEK+GF GREEGI +A VLI+R Sbjct: 127 IASGRCNVKAKTNEKLGFEGREEGIVAQAAVLIYR 161