BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3629.p (430 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774578.1| major facilitator superfamily permease [Herb... 706 0.0 ref|YP_004754172.1| major facilitator superfamily (MFS) transpor... 558 e-157 emb|CCA83798.1| monocarboxylate permease, transmembrane transpor... 498 e-139 ref|YP_003749088.1| monocarboxylate permease, transmembrane tran... 498 e-138 emb|CBJ39732.1| monocarboxylate permease, transmembrane transpor... 494 e-137 >ref|YP_003774578.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ62670.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 413/418 (98%), Positives = 413/418 (98%) Query: 1 MNKLTQSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISV 60 M K TQSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISV Sbjct: 1 MTKFTQSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISV 60 Query: 61 VISVNIALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLV 120 VISVNIALYGLIGPFSAAAMQRFGIRRVVL ALVLLASGTALSTLMHMPWHMLLSWGLLV Sbjct: 61 VISVNIALYGLIGPFSAAAMQRFGIRRVVLAALVLLASGTALSTLMHMPWHMLLSWGLLV 120 Query: 121 GAGTGVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAF 180 GAGTGVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAF Sbjct: 121 GAGTGVAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAF 180 Query: 181 LVSAVALLAIPLVWLLLPESPAAIGQKMLGQTSEIKAEGLSRRNPLFIALDALRTSVRMP 240 LVSAVALLAIPLVWLLLPESPAAIGQKMLGQTSEIK EGLSRRNPLFIALDALRTSVRMP Sbjct: 181 LVSAVALLAIPLVWLLLPESPAAIGQKMLGQTSEIKDEGLSRRNPLFIALDALRTSVRMP 240 Query: 241 DFWLLFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLS 300 DFWLLFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLS Sbjct: 241 DFWLLFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLS 300 Query: 301 DRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVF 360 DRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVF Sbjct: 301 DRYNPRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVF 360 Query: 361 GRLAAPIVFGWIVAGHQLGAATATTLGGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 GRLAAPIVFGWIVAGHQLGAATATTL GYLRASLGNYTLSSILMGVACLVGAVLVLRI Sbjct: 361 GRLAAPIVFGWIVAGHQLGAATATTLAGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 >ref|YP_004754172.1| major facilitator superfamily (MFS) transporter [Collimonas fungivorans Ter331] gb|AEK63349.1| Major facilitator superfamily (MFS) transporter, monocarboxylates [Collimonas fungivorans Ter331] Length = 435 Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 311/412 (75%), Positives = 354/412 (85%), Gaps = 1/412 (0%) Query: 15 RFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISVVISVNIALYGLIGP 74 RF Y W++VG+ FLVLL +AGIRATPSVMILPLE EFGW+ +TIS VISVNIALYGLIGP Sbjct: 13 RFSYVWIIVGITFLVLLAAAGIRATPSVMILPLEHEFGWSVTTISFVISVNIALYGLIGP 72 Query: 75 FSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLVGAGTGVAANTLGAT 134 FSAAAMQR+GIR +VLGALVLLA GT +ST M MPWHM+L+WG+LVG+G+GVAANTL AT Sbjct: 73 FSAAAMQRYGIRPMVLGALVLLAVGTFVSTFMTMPWHMVLAWGILVGSGSGVAANTLAAT 132 Query: 135 IVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAFLVSAVALLAIPLVW 194 IVSRWFETRRGLAMGLLTAS+ATGQMVFLPLMA MV YGWRSVA LV++VA LAIPLV Sbjct: 133 IVSRWFETRRGLAMGLLTASSATGQMVFLPLMAYMVEHYGWRSVAMLVASVAALAIPLVA 192 Query: 195 LLLPESPAAIGQKMLGQTSEIKAEGLSR-RNPLFIALDALRTSVRMPDFWLLFASFFVCG 253 + LPE P IG K GQ E+ E +S+ +NPL IA +AL +V++ DFWLLF SFF+CG Sbjct: 193 IFLPERPQDIGMKRYGQFEELPPEAVSKSKNPLSIAFEALGKAVKIRDFWLLFFSFFICG 252 Query: 254 LSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDRYNPRVLLFWYY 313 +STNGYIG+ FIAMC DYGI+ V ASILA MG+LDL GTT+SGWLSDR+N RVLLFWYY Sbjct: 253 MSTNGYIGSHFIAMCGDYGISAVGGASILATMGLLDLFGTTMSGWLSDRFNARVLLFWYY 312 Query: 314 GLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGRLAAPIVFGWIV 373 GLRG+ALIFLP+AFGL Y+GL +FA+FYGLDWIATVPPTVRLANDVFGRLAAPIVFGWIV Sbjct: 313 GLRGVALIFLPHAFGLSYFGLPVFALFYGLDWIATVPPTVRLANDVFGRLAAPIVFGWIV 372 Query: 374 AGHQLGAATATTLGGYLRASLGNYTLSSILMGVACLVGAVLVLRIKGKAGGA 425 AGHQLGAA+AT L G LR SLG+YTLSS+LMG AC+V AV+VLRIKG G Sbjct: 373 AGHQLGAASATMLAGSLRNSLGSYTLSSVLMGAACIVAAVMVLRIKGHHAGG 424 >emb|CCA83798.1| monocarboxylate permease, transmembrane transport protein of the MFS family [blood disease bacterium R229] Length = 432 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 277/414 (66%), Positives = 335/414 (80%), Gaps = 1/414 (0%) Query: 6 QSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISVVISVN 65 Q LA V PRFHY W+ + V+FL+LLC+AG RATPSVM+LPLE EFGW+R TIS+ IS+ Sbjct: 2 QRLARFVAPRFHYGWIALAVVFLILLCAAGTRATPSVMMLPLEHEFGWSRGTISLAISIG 61 Query: 66 IALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLVGAGTG 125 IALYGL GPF+AA+MQ FGIR VLGAL LL SGTALS +M PW M+L WG++VG GTG Sbjct: 62 IALYGLTGPFAAASMQYFGIRPTVLGALALLISGTALSAMMSQPWQMVLLWGVMVGGGTG 121 Query: 126 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAFLVSAV 185 VAA TLGAT+V+RWF T RGLAMG+LTAS+ATGQ+VFLP+MAA+V +GWR V +V+ Sbjct: 122 VAAITLGATVVNRWFTTHRGLAMGILTASSATGQLVFLPMMAAVVEHHGWRPVVLIVAGA 181 Query: 186 ALLAIPLVWLLLPESPAAIGQKMLGQTSEI-KAEGLSRRNPLFIALDALRTSVRMPDFWL 244 L +P+V LLPESP ++G + G+ ++ +A+ R NP+ +A+ L ++R DFWL Sbjct: 182 LALLLPIVGFLLPESPKSVGLRTYGEPADAPEADHGPRANPITLAMHTLVQAMRKRDFWL 241 Query: 245 LFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDRYN 304 LFASFF+CG STNGYIGT FIAMC D+G+ EV AS+LAAMG+ DLVGTTLSGWLSDRYN Sbjct: 242 LFASFFICGASTNGYIGTHFIAMCADHGLTEVKGASLLAAMGIFDLVGTTLSGWLSDRYN 301 Query: 305 PRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGRLA 364 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ A Sbjct: 302 SRVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAA 361 Query: 365 APIVFGWIVAGHQLGAATATTLGGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 APIVFGWIVAGHQLGAA AT G +RASLGNYT++S++ G C+ GA LVLRI Sbjct: 362 APIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTVASMISGGLCVAGAFLVLRI 415 >ref|YP_003749088.1| monocarboxylate permease, transmembrane transport protein of the mfs family [Ralstonia solanacearum PSI07] emb|CBJ34435.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia solanacearum PSI07] emb|CCA87400.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia syzygii R24] Length = 432 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 276/414 (66%), Positives = 335/414 (80%), Gaps = 1/414 (0%) Query: 6 QSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISVVISVN 65 Q LA V PRFHY W+ + V+FL+LLC+AG RATPSVM+LPLE EFGW+R TIS+ IS+ Sbjct: 2 QRLARFVAPRFHYGWIALAVVFLILLCAAGTRATPSVMMLPLEHEFGWSRGTISLAISIG 61 Query: 66 IALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLVGAGTG 125 IALYGL GPF+AA+MQ FGIR VLGAL LL SGTALS +M PW M+L WG++VG GTG Sbjct: 62 IALYGLTGPFAAASMQYFGIRPTVLGALALLISGTALSAMMSQPWQMVLLWGVMVGGGTG 121 Query: 126 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAFLVSAV 185 VAA TLGAT+V+RWF T RGLAMG+LTAS+ATGQ+VFLP+MAA+V +GWR V +V+ Sbjct: 122 VAAITLGATVVNRWFTTHRGLAMGILTASSATGQLVFLPMMAAVVEHHGWRPVVLIVAGA 181 Query: 186 ALLAIPLVWLLLPESPAAIGQKMLGQTSEI-KAEGLSRRNPLFIALDALRTSVRMPDFWL 244 L +P+V LLPESP ++G + G+ ++ +A+ R NP+ +A+ L ++R DFWL Sbjct: 182 LALLLPIVGFLLPESPKSVGLRTYGEPADAPEADHGPRANPITLAMHTLVQAMRKRDFWL 241 Query: 245 LFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDRYN 304 LFASFF+CG STNGYIGT FIAMC D+G+ EV AS+LAAMG+ DL+GTTLSGWLSDRYN Sbjct: 242 LFASFFICGASTNGYIGTHFIAMCADHGLTEVKGASLLAAMGIFDLIGTTLSGWLSDRYN 301 Query: 305 PRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGRLA 364 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ A Sbjct: 302 SRVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAA 361 Query: 365 APIVFGWIVAGHQLGAATATTLGGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 APIVFGWIVAGHQLGAA AT G +RASLGNYT++S++ G C+ GA LVLRI Sbjct: 362 APIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTVASMISGGLCVAGAFLVLRI 415 >emb|CBJ39732.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia solanacearum CMR15] Length = 432 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 276/414 (66%), Positives = 335/414 (80%), Gaps = 1/414 (0%) Query: 6 QSLANAVTPRFHYAWVVVGVIFLVLLCSAGIRATPSVMILPLEQEFGWNRSTISVVISVN 65 Q LA + PR HY W+ + V+FL+LLC+AG RATPSVM+LPLE EFGW+R TIS+ IS+ Sbjct: 2 QRLARLIAPRVHYGWIALAVVFLILLCAAGTRATPSVMMLPLEHEFGWSRGTISLAISIG 61 Query: 66 IALYGLIGPFSAAAMQRFGIRRVVLGALVLLASGTALSTLMHMPWHMLLSWGLLVGAGTG 125 IALYGL GPF+AA+MQ FGIR VLGALV+L SGTALS +M PW M+L WG++VG GTG Sbjct: 62 IALYGLTGPFAAASMQYFGIRPTVLGALVVLISGTALSAMMSQPWQMVLLWGVMVGGGTG 121 Query: 126 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAFLVSAV 185 VAA TLGAT+V+RWF + RGLAMG+LTAS+ATGQ+VFLP+MAA+V +GWR V +V+ Sbjct: 122 VAAITLGATVVNRWFTSHRGLAMGILTASSATGQLVFLPMMAAVVERHGWRPVVLIVAGA 181 Query: 186 ALLAIPLVWLLLPESPAAIGQKMLGQTSEI-KAEGLSRRNPLFIALDALRTSVRMPDFWL 244 +L +P+V LLPESP ++G + G ++ +A+ R NP+ +AL L ++R DFWL Sbjct: 182 LVLLLPIVGFLLPESPKSVGLRTYGAPADAPEADHGPRTNPITLALHTLMQAMRKRDFWL 241 Query: 245 LFASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDRYN 304 LFASFF+CG STNGYIGT FIAMC D+G+ EV AS+LAAMG+ DLVGTTLSGWLSDRYN Sbjct: 242 LFASFFICGASTNGYIGTHFIAMCADHGMTEVKGASLLAAMGIFDLVGTTLSGWLSDRYN 301 Query: 305 PRVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGRLA 364 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ A Sbjct: 302 SRVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAA 361 Query: 365 APIVFGWIVAGHQLGAATATTLGGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 APIVFGWIVAGHQLGAA AT G +RASLGNYTL+S++ G C+ GA LVLRI Sbjct: 362 APIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTLASMISGGLCVAGAFLVLRI 415