BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3624.p (459 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774581.1| glucarate dehydratase [Herbaspirillum serope... 816 0.0 ref|YP_004751403.1| glucarate dehydratase [Collimonas fungivoran... 754 0.0 ref|YP_003910152.1| glucarate dehydratase [Burkholderia sp. CCGE... 738 0.0 ref|ZP_07261623.1| glucarate dehydratase [Pseudomonas syringae p... 738 0.0 gb|EGH54906.1| glucarate dehydratase [Pseudomonas syringae Cit 7] 738 0.0 >ref|YP_003774581.1| glucarate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62673.1| glucarate dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 455 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 427/453 (94%), Positives = 438/453 (96%), Gaps = 1/453 (0%) Query: 7 AAAVPDSSAAQHKGAPRVTDMRVIPVAGHDSMLLNLSGAHGPYFTRNIVILTDSAGNTGV 66 +AA+P + +GAPRVT+MRVIPVAGHDSMLLNLSGAHGPYFTRN+VILTDSAGNTGV Sbjct: 4 SAAIP-HTVQPVQGAPRVTEMRVIPVAGHDSMLLNLSGAHGPYFTRNLVILTDSAGNTGV 62 Query: 67 GEVPGGEGIRQTLDDARSLVVGQSIGNVQAILNRARTAFADRDVGGRGLQTFDLRIAIHA 126 GEVPGGEGIRQTL+DAR+LVVGQSIGNVQ ILNRARTAFADRD GGRGLQTFDLRIAIHA Sbjct: 63 GEVPGGEGIRQTLEDARTLVVGQSIGNVQGILNRARTAFADRDTGGRGLQTFDLRIAIHA 122 Query: 127 VTALEAALLDLLGKFLDVPVAALLGEGQQRDEVEMLGYLFYVADRRKTDLPYLAAADADD 186 VTALEAALLDLLGKFLDVPVAALLGEGQQRDEVEMLGYLFYVADR KTDLPYLAA DA D Sbjct: 123 VTALEAALLDLLGKFLDVPVAALLGEGQQRDEVEMLGYLFYVADRNKTDLPYLAAPDAQD 182 Query: 187 DWLRLRHEAALTPDAVVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARI 246 DW RLRHEAALTP+AVVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARI Sbjct: 183 DWTRLRHEAALTPEAVVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARI 242 Query: 247 TLDPNGGWLLKDAIRLCRDQHDVLAYAEDPCGAEGGYSGREVMAEFRRATGLQTATNMVA 306 TLDPNGGWLLKDAIRLCRDQHDVLAYAEDPCGAE GYSGREVMAEFRRATGLQTATNMVA Sbjct: 243 TLDPNGGWLLKDAIRLCRDQHDVLAYAEDPCGAEDGYSGREVMAEFRRATGLQTATNMVA 302 Query: 307 TDWRQMGHAISLQSVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFT 366 TDWRQMGHAISLQSVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFD+SLAMFT Sbjct: 303 TDWRQMGHAISLQSVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDVSLAMFT 362 Query: 367 HVAAAAPGKITAIDTHWIWQDGQRLTREPLQIVGGKVKVPGKPGLGVELDMEQVEAAHQT 426 HVAAAAPGKITAIDTHWIWQDGQRLTREPLQIVGGKV+VP KPGLGVELDM QVEAAHQT Sbjct: 363 HVAAAAPGKITAIDTHWIWQDGQRLTREPLQIVGGKVQVPTKPGLGVELDMAQVEAAHQT 422 Query: 427 YRNMGLGARDDAVAMQYLIPGWKFDPKKPCLVR 459 YRNMGLGARDDAVAMQYLIPGWKFDPKKPCLVR Sbjct: 423 YRNMGLGARDDAVAMQYLIPGWKFDPKKPCLVR 455 >ref|YP_004751403.1| glucarate dehydratase [Collimonas fungivorans Ter331] gb|AEK60580.1| Glucarate dehydratase [Collimonas fungivorans Ter331] Length = 475 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 379/440 (86%), Positives = 401/440 (91%) Query: 20 GAPRVTDMRVIPVAGHDSMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGEGIRQTL 79 G P + DMRV+PVAG DSMLLNLSGAHGPYFTRNIVIL DSAGNTGVGEVPGGE IRQTL Sbjct: 36 GTPHIVDMRVVPVAGRDSMLLNLSGAHGPYFTRNIVILRDSAGNTGVGEVPGGERIRQTL 95 Query: 80 DDARSLVVGQSIGNVQAILNRARTAFADRDVGGRGLQTFDLRIAIHAVTALEAALLDLLG 139 +DAR L++G+SIG+ QAILN ARTAF DRD GGRGLQTFDLRIAIHAVTALEAALLDLLG Sbjct: 96 EDARPLLLGKSIGSYQAILNSARTAFGDRDAGGRGLQTFDLRIAIHAVTALEAALLDLLG 155 Query: 140 KFLDVPVAALLGEGQQRDEVEMLGYLFYVADRRKTDLPYLAAADADDDWLRLRHEAALTP 199 KFL VPVAALLGEGQQRD V+MLGYLFYV DR TDLPY +A DA DDWLRLRHE AL Sbjct: 156 KFLGVPVAALLGEGQQRDAVKMLGYLFYVGDRNATDLPYASAPDAADDWLRLRHEPALDA 215 Query: 200 DAVVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARITLDPNGGWLLKDA 259 AVV LAEAAY RYGFNDFKLKGGV+RGE+EI AVTALAERFP ARITLDPNGGWLLKDA Sbjct: 216 QAVVALAEAAYQRYGFNDFKLKGGVLRGEDEIEAVTALAERFPAARITLDPNGGWLLKDA 275 Query: 260 IRLCRDQHDVLAYAEDPCGAEGGYSGREVMAEFRRATGLQTATNMVATDWRQMGHAISLQ 319 IRLCRDQH VLAYAEDPCGAE G+SGREVMAEFRRATGLQTATNM+ATDWR+MGHAI LQ Sbjct: 276 IRLCRDQHAVLAYAEDPCGAENGFSGREVMAEFRRATGLQTATNMIATDWREMGHAIQLQ 335 Query: 320 SVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAI 379 SVDIPLADPHFWTMQGSVRVAQMC EWGLTWGSHSNNHFDISLAMFTHVAAAAPG ITAI Sbjct: 336 SVDIPLADPHFWTMQGSVRVAQMCREWGLTWGSHSNNHFDISLAMFTHVAAAAPGDITAI 395 Query: 380 DTHWIWQDGQRLTREPLQIVGGKVKVPGKPGLGVELDMEQVEAAHQTYRNMGLGARDDAV 439 DTHWIWQDGQRLT+EPL+I GG V+VP KPGLG+ELD+ ++EAAHQ YR MGLGARDDAV Sbjct: 396 DTHWIWQDGQRLTKEPLRIAGGMVEVPKKPGLGIELDLAELEAAHQLYRGMGLGARDDAV 455 Query: 440 AMQYLIPGWKFDPKKPCLVR 459 AMQYLIPGWKFD KKPCL+R Sbjct: 456 AMQYLIPGWKFDNKKPCLLR 475 >ref|YP_003910152.1| glucarate dehydratase [Burkholderia sp. CCGE1003] gb|ADN60861.1| glucarate dehydratase [Burkholderia sp. CCGE1003] Length = 449 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 367/438 (83%), Positives = 394/438 (89%) Query: 22 PRVTDMRVIPVAGHDSMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGEGIRQTLDD 81 P VT++RV+PVAG DSMLLNLSGAHGP+FTRN+VIL DSAG+ GVGEVPGGE IR+T+DD Sbjct: 12 PTVTELRVVPVAGRDSMLLNLSGAHGPFFTRNVVILRDSAGHIGVGEVPGGENIRKTIDD 71 Query: 82 ARSLVVGQSIGNVQAILNRARTAFADRDVGGRGLQTFDLRIAIHAVTALEAALLDLLGKF 141 AR VVGQSIGN+QAILN+ RT FADRD GGRGLQTFDLR IHAVTALEAALLDLLG+ Sbjct: 72 ARPFVVGQSIGNLQAILNKVRTQFADRDAGGRGLQTFDLRTTIHAVTALEAALLDLLGQH 131 Query: 142 LDVPVAALLGEGQQRDEVEMLGYLFYVADRRKTDLPYLAAADADDDWLRLRHEAALTPDA 201 LDVPVAALLGEGQQRDEVEMLGYLFY+ DR KTDL Y + AD DDW RLR E ALTP+A Sbjct: 132 LDVPVAALLGEGQQRDEVEMLGYLFYIGDRNKTDLQYASGADGRDDWERLRTEEALTPEA 191 Query: 202 VVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARITLDPNGGWLLKDAIR 261 VVRLAEAA ARYGFNDFKLKGGV+ G+ EI AVTALAERFP AR+TLDPNG W L +A+R Sbjct: 192 VVRLAEAAQARYGFNDFKLKGGVLSGDAEIEAVTALAERFPNARVTLDPNGAWSLAEAVR 251 Query: 262 LCRDQHDVLAYAEDPCGAEGGYSGREVMAEFRRATGLQTATNMVATDWRQMGHAISLQSV 321 LCR +HDVLAYAEDPCGAE GYSGREVMAEFRRATGL TATNM+ATDWRQMGHAI LQSV Sbjct: 252 LCRGKHDVLAYAEDPCGAENGYSGREVMAEFRRATGLPTATNMIATDWRQMGHAIQLQSV 311 Query: 322 DIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDT 381 DIPLADPHFWTMQGSVRVAQMC++WGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDT Sbjct: 312 DIPLADPHFWTMQGSVRVAQMCNDWGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDT 371 Query: 382 HWIWQDGQRLTREPLQIVGGKVKVPGKPGLGVELDMEQVEAAHQTYRNMGLGARDDAVAM 441 HWIWQDGQRLTREPLQIVGGKVKVP KPGLGVELDME++E AH Y+ GLGARDD VAM Sbjct: 372 HWIWQDGQRLTREPLQIVGGKVKVPQKPGLGVELDMEEIEKAHALYQQHGLGARDDGVAM 431 Query: 442 QYLIPGWKFDPKKPCLVR 459 QYLIP WKFD K+PCLVR Sbjct: 432 QYLIPNWKFDNKRPCLVR 449 >ref|ZP_07261623.1| glucarate dehydratase [Pseudomonas syringae pv. syringae 642] Length = 450 Score = 738 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 364/439 (82%), Positives = 400/439 (91%) Query: 21 APRVTDMRVIPVAGHDSMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGEGIRQTLD 80 AP +T+M+V+PVAGHD MLLNLSGAHGPYFTRN+VIL D+AG+ GVGEVPGGE IRQTL+ Sbjct: 12 APVITEMQVVPVAGHDDMLLNLSGAHGPYFTRNVVILKDNAGHVGVGEVPGGELIRQTLE 71 Query: 81 DARSLVVGQSIGNVQAILNRARTAFADRDVGGRGLQTFDLRIAIHAVTALEAALLDLLGK 140 DARSLVVG SIG Q ILN AR AFADRD GGRGLQTFDLRIAIHAVTALEAALLDLLG+ Sbjct: 72 DARSLVVGSSIGTYQKILNEARKAFADRDSGGRGLQTFDLRIAIHAVTALEAALLDLLGQ 131 Query: 141 FLDVPVAALLGEGQQRDEVEMLGYLFYVADRRKTDLPYLAAADADDDWLRLRHEAALTPD 200 L+VPVAALLGEGQQRD+VEMLGYLFYV D+RKTDL Y + +AD+DW R+RHE ALTP+ Sbjct: 132 HLEVPVAALLGEGQQRDQVEMLGYLFYVGDQRKTDLAYRSEPEADNDWFRIRHEEALTPE 191 Query: 201 AVVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARITLDPNGGWLLKDAI 260 AVVRLAEAA+ RYGF DFKLKGGV+ G++EI AVTALAERFP ARITLDPNG W LK+AI Sbjct: 192 AVVRLAEAAHQRYGFQDFKLKGGVLSGDQEIEAVTALAERFPDARITLDPNGAWSLKEAI 251 Query: 261 RLCRDQHDVLAYAEDPCGAEGGYSGREVMAEFRRATGLQTATNMVATDWRQMGHAISLQS 320 RLCRDQH VLAYAEDPCGAE GYSGREVMAEFRRATGL+TATNM+ATDWR+MGHAI LQS Sbjct: 252 RLCRDQHHVLAYAEDPCGAENGYSGREVMAEFRRATGLRTATNMIATDWREMGHAIQLQS 311 Query: 321 VDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAID 380 VDIPLADPHFWTMQGSVRVAQMC+EWGLTWGSHSNNHFDISLAMFTHVAAAAPG ITAID Sbjct: 312 VDIPLADPHFWTMQGSVRVAQMCNEWGLTWGSHSNNHFDISLAMFTHVAAAAPGNITAID 371 Query: 381 THWIWQDGQRLTREPLQIVGGKVKVPGKPGLGVELDMEQVEAAHQTYRNMGLGARDDAVA 440 THWIWQDGQRLT+ PLQIVGGKV+VP KPGLGVELDM+Q+ AH+ Y+ MGLGAR+DAVA Sbjct: 372 THWIWQDGQRLTKAPLQIVGGKVEVPKKPGLGVELDMDQLAKAHELYKGMGLGARNDAVA 431 Query: 441 MQYLIPGWKFDPKKPCLVR 459 MQ+LIP WKF+ K+PCLVR Sbjct: 432 MQFLIPDWKFNNKQPCLVR 450 >gb|EGH54906.1| glucarate dehydratase [Pseudomonas syringae Cit 7] Length = 450 Score = 738 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 363/438 (82%), Positives = 400/438 (91%) Query: 22 PRVTDMRVIPVAGHDSMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGEGIRQTLDD 81 P +T+M+V+PVAGHD MLLNLSGAHGPYFTRN+VIL D+AG+ GVGEVPGGE IRQTL+D Sbjct: 13 PVITEMQVVPVAGHDDMLLNLSGAHGPYFTRNVVILKDNAGHVGVGEVPGGELIRQTLED 72 Query: 82 ARSLVVGQSIGNVQAILNRARTAFADRDVGGRGLQTFDLRIAIHAVTALEAALLDLLGKF 141 ARSLVVG SIG Q ILN AR AFADRD GGRGLQTFDLRIAIHAVTALEAALLDLLG+ Sbjct: 73 ARSLVVGSSIGTYQKILNEARKAFADRDAGGRGLQTFDLRIAIHAVTALEAALLDLLGQH 132 Query: 142 LDVPVAALLGEGQQRDEVEMLGYLFYVADRRKTDLPYLAAADADDDWLRLRHEAALTPDA 201 L+VPVAALLGEGQQRD+VEMLGYLFYV D+RKTDL Y + +AD+DW R+RHE ALTP+A Sbjct: 133 LEVPVAALLGEGQQRDQVEMLGYLFYVGDQRKTDLAYRSEPEADNDWFRIRHEEALTPEA 192 Query: 202 VVRLAEAAYARYGFNDFKLKGGVMRGEEEIAAVTALAERFPKARITLDPNGGWLLKDAIR 261 VVRLAEAA+ RYGF DFKLKGGV+ G++EI AVTALAERFP+ARITLDPNG W LK+AIR Sbjct: 193 VVRLAEAAHQRYGFQDFKLKGGVLSGDQEIEAVTALAERFPEARITLDPNGAWSLKEAIR 252 Query: 262 LCRDQHDVLAYAEDPCGAEGGYSGREVMAEFRRATGLQTATNMVATDWRQMGHAISLQSV 321 LCRDQH VLAYAEDPCGAE GYSGREVMAEFRRATGL+TATNM+ATDWR+MGHAI LQSV Sbjct: 253 LCRDQHHVLAYAEDPCGAENGYSGREVMAEFRRATGLKTATNMIATDWREMGHAIQLQSV 312 Query: 322 DIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDT 381 DIPLADPHFWTMQGSVRVAQMC+EWGLTWGSHSNNHFDISLAMFTHVAAAAPG ITAIDT Sbjct: 313 DIPLADPHFWTMQGSVRVAQMCNEWGLTWGSHSNNHFDISLAMFTHVAAAAPGTITAIDT 372 Query: 382 HWIWQDGQRLTREPLQIVGGKVKVPGKPGLGVELDMEQVEAAHQTYRNMGLGARDDAVAM 441 HWIWQDGQRLT+ PLQIVGGKV+VP KPGLGVELDM+Q+ AH+ Y+ MGLGAR+DAVAM Sbjct: 373 HWIWQDGQRLTKAPLQIVGGKVEVPKKPGLGVELDMDQLAKAHELYKGMGLGARNDAVAM 432 Query: 442 QYLIPGWKFDPKKPCLVR 459 Q+LIP WKF+ K+PCLVR Sbjct: 433 QFLIPDWKFNNKQPCLVR 450