BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3623.p (474 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774582.1| major facilitator superfamily permease [Herb... 735 0.0 ref|YP_004753404.1| major facilitator family transporter [Collim... 590 e-166 ref|ZP_07005010.1| Major facilitator family transporter [Pseudom... 554 e-155 ref|NP_792708.1| tartrate transporter [Pseudomonas syringae pv. ... 553 e-155 ref|YP_001889981.1| major facilitator superfamily protein [Burkh... 553 e-155 >ref|YP_003774582.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ62674.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 447 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 412/447 (92%), Positives = 425/447 (95%) Query: 24 VNPSQSSPATNQVLTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLATDLGIGAAA 83 +NPSQSS LTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHL+TDLGIGAAA Sbjct: 1 MNPSQSSTPAGLALTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLSTDLGIGAAA 60 Query: 84 FGLGAGLFFVGYAIFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVHSETSFYFMRF 143 FGLGAGLFFVGYA+FEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFV SETSFYFMRF Sbjct: 61 FGLGAGLFFVGYALFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVQSETSFYFMRF 120 Query: 144 LLGVTEAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLH 203 LLGV EAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLH Sbjct: 121 LLGVAEAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLH 180 Query: 204 GWQWMFIIEGGASMLFCVVVWKVLDSTPRDAKWLSPEQREALATVIAAEQEQRAANRPAH 263 GWQWMFIIEGGASM+FCVVVW VLDSTPR+AKWLS EQREALA VIAAEQEQRAANRPAH Sbjct: 181 GWQWMFIIEGGASMVFCVVVWLVLDSTPREAKWLSQEQREALAAVIAAEQEQRAANRPAH 240 Query: 264 VSALTLLRDPQIVLFCLIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAI 323 VSAL+LLRDPQIVLFC IYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAI Sbjct: 241 VSALSLLRDPQIVLFCFIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAI 300 Query: 324 AAMYVFAVLAARYKKPQFWVATTLVISAIGMAVSASAGPVIGFVAVCFAGIGFKAASSLF 383 AAMY+FAVLAARYKKPQFWVATTLVISA GMA+SA AGPVIGFVAVCFAGIGFKAASSLF Sbjct: 301 AAMYLFAVLAARYKKPQFWVATTLVISAAGMAISAVAGPVIGFVAVCFAGIGFKAASSLF 360 Query: 384 WPIPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLYALSGASLVAA 443 WPIPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGL+ALSGASL+AA Sbjct: 361 WPIPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLFALSGASLLAA 420 Query: 444 VLVFLARTRPSVQDGGGSPEGSTEPVA 470 VLVFLARTRP+ DGGG E + + A Sbjct: 421 VLVFLARTRPAAPDGGGPAEAAVKHAA 447 >ref|YP_004753404.1| major facilitator family transporter [Collimonas fungivorans Ter331] gb|AEK62581.1| Major facilitator family transporter [Collimonas fungivorans Ter331] Length = 440 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 319/416 (76%), Positives = 363/416 (87%) Query: 37 LTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLATDLGIGAAAFGLGAGLFFVGYA 96 L AVSK+KWRILPLFV MFI NYIDRVNIGFVRSHL TDLGIGAAAFGLGAGLFFV YA Sbjct: 23 LDIAVSKVKWRILPLFVVMFIANYIDRVNIGFVRSHLQTDLGIGAAAFGLGAGLFFVAYA 82 Query: 97 IFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVHSETSFYFMRFLLGVTEAGFFPGV 156 +FEVPSN+L QR+GA+AWLTRIMFTWG+VA MAF+ ETSFY MR LLGV EAGFFPGV Sbjct: 83 VFEVPSNILQQRFGAKAWLTRIMFTWGVVATGMAFITGETSFYVMRLLLGVAEAGFFPGV 142 Query: 157 VYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLHGWQWMFIIEGGAS 216 VYYFTQWLPN ERG+AMA+FLSGSA+AS++SGP++GALL IEGGG HGWQWMFIIEG AS Sbjct: 143 VYYFTQWLPNSERGKAMAIFLSGSALASVISGPLSGALLQIEGGGFHGWQWMFIIEGAAS 202 Query: 217 MLFCVVVWKVLDSTPRDAKWLSPEQREALATVIAAEQEQRAANRPAHVSALTLLRDPQIV 276 ++ C+VVW LDS PRDAKWL+ +R+ALA VI AEQ++R ANRP HVS+L LL+D +I Sbjct: 203 IVLCLVVWFRLDSHPRDAKWLTDSERKALAEVIDAEQKEREANRPKHVSSLALLKDGRIA 262 Query: 277 LFCLIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAIAAMYVFAVLAARY 336 LFC +YFAIQLTIYGATFWLP+IIKKMGHF+DFQ+GLFNSIPW+++I AMY+FA LAAR+ Sbjct: 263 LFCFVYFAIQLTIYGATFWLPSIIKKMGHFSDFQIGLFNSIPWLISIVAMYIFASLAARF 322 Query: 337 KKPQFWVATTLVISAIGMAVSASAGPVIGFVAVCFAGIGFKAASSLFWPIPQAYLDARIA 396 K Q WVA LV++A GM +S ++GPV FVA+CFA IGFKAASSLFWPIPQ YLDARIA Sbjct: 323 KHQQMWVAIALVVAACGMFMSTTSGPVFAFVAICFAAIGFKAASSLFWPIPQGYLDARIA 382 Query: 397 AAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLYALSGASLVAAVLVFLARTR 452 A V+ALINSLGNLGGF APATFGYLEQKTGSIQGGLY L+ AS+VAA LVFL + R Sbjct: 383 AGVIALINSLGNLGGFVAPATFGYLEQKTGSIQGGLYGLAAASVVAAALVFLTKKR 438 >ref|ZP_07005010.1| Major facilitator family transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFH99586.1| Major facilitator family transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 471 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 297/428 (69%), Positives = 348/428 (81%), Gaps = 3/428 (0%) Query: 26 PSQSSPATNQVLTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLATDLGIGAAAFG 85 P + P VL A SK+K +LPLFV MFI+NYIDRVNIGFVRSHL TDLGIGAAA+G Sbjct: 11 PGTTDPT---VLARAASKVKRHVLPLFVVMFIVNYIDRVNIGFVRSHLETDLGIGAAAYG 67 Query: 86 LGAGLFFVGYAIFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVHSETSFYFMRFLL 145 LGAGLFFVGYA+FEVPSNMLLQRYGARAWLTRIMFTWG A MAFV ETSFY +RF+L Sbjct: 68 LGAGLFFVGYALFEVPSNMLLQRYGARAWLTRIMFTWGAAAMAMAFVQGETSFYVLRFIL 127 Query: 146 GVTEAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLHGW 205 G EAGFFPG++YYFTQWLP+ +RG+AMA+FLSGSAIAS++SGP++GALL IEG LHGW Sbjct: 128 GAAEAGFFPGIIYYFTQWLPSSDRGKAMALFLSGSAIASVISGPVSGALLGIEGLSLHGW 187 Query: 206 QWMFIIEGGASMLFCVVVWKVLDSTPRDAKWLSPEQREALATVIAAEQEQRAANRPAHVS 265 QWMF+IEG AS++ C VW L S P +A WLS E++ AL+T I+ EQ R A + S Sbjct: 188 QWMFLIEGFASIVLCGFVWFWLQSHPHEATWLSDEEKTALSTAISEEQRLREATQTVRPS 247 Query: 266 ALTLLRDPQIVLFCLIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAIAA 325 LL D QI+LFC IYF++ LTIYGATFWLP++I+KMG F+DF+VGLFNS+PWI++I A Sbjct: 248 VFRLLADRQILLFCFIYFSVALTIYGATFWLPSMIRKMGSFSDFEVGLFNSVPWIISIVA 307 Query: 326 MYVFAVLAARYKKPQFWVATTLVISAIGMAVSASAGPVIGFVAVCFAGIGFKAASSLFWP 385 MY FA LAAR+K Q WVA TLVI+A+GM +S GPV FVA+CFA IGFKAAS+LFWP Sbjct: 308 MYGFAALAARFKHQQAWVAVTLVIAAVGMFMSTIGGPVFAFVAICFAAIGFKAASALFWP 367 Query: 386 IPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLYALSGASLVAAVL 445 IPQ YLDARIAAAV+ALINS+GNLGGF AP TFG+LEQ TGSIQGGLY L+ SL+AAV+ Sbjct: 368 IPQGYLDARIAAAVIALINSIGNLGGFVAPTTFGFLEQTTGSIQGGLYGLAATSLLAAVV 427 Query: 446 VFLARTRP 453 +F ART P Sbjct: 428 IFFARTTP 435 >ref|NP_792708.1| tartrate transporter [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO56403.1| tartrate transporter, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 447 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 298/437 (68%), Positives = 354/437 (81%), Gaps = 3/437 (0%) Query: 36 VLTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLATDLGIGAAAFGLGAGLFFVGY 95 +L A +K+K ++PLFV MFI+NYIDRVNIGFVRSHL TDLGIGAAA+GLGAGLFFVGY Sbjct: 1 MLARAATKVKRHVMPLFVVMFIVNYIDRVNIGFVRSHLETDLGIGAAAYGLGAGLFFVGY 60 Query: 96 AIFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVHSETSFYFMRFLLGVTEAGFFPG 155 A+FEVPSNMLLQRYGARAWLTRIMFTWG A MAFV ETSFY +RF+LG EAGFFPG Sbjct: 61 ALFEVPSNMLLQRYGARAWLTRIMFTWGAAAMAMAFVKGETSFYVLRFILGAAEAGFFPG 120 Query: 156 VVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLHGWQWMFIIEGGA 215 ++YYFTQWLP+ +RG+AMA+FLSGSAIAS++SGP++GALL +EG LHGWQWMF+IEG A Sbjct: 121 IIYYFTQWLPSSDRGKAMALFLSGSAIASVISGPVSGALLGVEGLNLHGWQWMFLIEGFA 180 Query: 216 SMLFCVVVWKVLDSTPRDAKWLSPEQREALATVIAAEQEQRAANRPAHVSALTLLRDPQI 275 S++ C VVW L S P +A WLS E++ AL TVIA EQ QR A + + LL D QI Sbjct: 181 SIVLCGVVWFWLQSHPHEATWLSNEEKTALTTVIAEEQRQREATQTVRPTLFRLLADRQI 240 Query: 276 VLFCLIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAIAAMYVFAVLAAR 335 +LFC IYF+I LTIYGATFWLP++I+KMG F+DF+VGLFNS+PWI++I AMY FA LAAR Sbjct: 241 MLFCFIYFSIALTIYGATFWLPSMIRKMGSFSDFEVGLFNSVPWIISIVAMYGFAALAAR 300 Query: 336 YKKPQFWVATTLVISAIGMAVSASAGPVIGFVAVCFAGIGFKAASSLFWPIPQAYLDARI 395 +K Q WVA TLVI+++GM +S + GPV FVA+CFA IGFKAAS+LFWPIPQ YLDARI Sbjct: 301 FKHQQAWVAVTLVIASVGMFMSTNGGPVFAFVAICFAAIGFKAASALFWPIPQGYLDARI 360 Query: 396 AAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLYALSGASLVAAVLVFLARTRPSV 455 AAAV+ALINS+GNLGGF AP TFG+LEQ TGSIQ GLY L+ SL+AA+++F ART P Sbjct: 361 AAAVIALINSIGNLGGFVAPTTFGFLEQTTGSIQDGLYGLAATSLLAAIVIFFARTTPR- 419 Query: 456 QDGGGSPEGSTEPVAKH 472 G EPVA+H Sbjct: 420 --GDQRRPAKAEPVARH 434 >ref|YP_001889981.1| major facilitator superfamily protein [Burkholderia phytofirmans PsJN] gb|ACD20610.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans PsJN] Length = 442 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 296/428 (69%), Positives = 349/428 (81%) Query: 26 PSQSSPATNQVLTSAVSKIKWRILPLFVAMFIINYIDRVNIGFVRSHLATDLGIGAAAFG 85 P+ + P L SAV KIKW +LPLFV MF++NYIDRVNIGFVR HL+ DLGIGAAA+G Sbjct: 6 PATAGPDRTDALASAVRKIKWHVLPLFVVMFVVNYIDRVNIGFVRQHLSADLGIGAAAYG 65 Query: 86 LGAGLFFVGYAIFEVPSNMLLQRYGARAWLTRIMFTWGLVAACMAFVHSETSFYFMRFLL 145 LGAGLFFV YAIFEVPSNMLLQR+GA+AWLTRIMFTWGL A MAFV ETSFY MR LL Sbjct: 66 LGAGLFFVSYAIFEVPSNMLLQRFGAKAWLTRIMFTWGLAAVGMAFVRGETSFYAMRLLL 125 Query: 146 GVTEAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSGPITGALLLIEGGGLHGW 205 G EAGFFPGV++YFTQWLP ERG+AMA+FLSGSA+ASILSGPI+GAL+LI GGGLHGW Sbjct: 126 GAAEAGFFPGVIFYFTQWLPRGERGKAMAIFLSGSALASILSGPISGALMLISGGGLHGW 185 Query: 206 QWMFIIEGGASMLFCVVVWKVLDSTPRDAKWLSPEQREALATVIAAEQEQRAANRPAHVS 265 QWMF+IEG AS++ +W LDS PRDA+WLS ++ A+ I EQ +R A S Sbjct: 186 QWMFVIEGMASVVLAGFIWFWLDSKPRDARWLSSAEQNAIVAEIEEEQRERDAAHAVMPS 245 Query: 266 ALTLLRDPQIVLFCLIYFAIQLTIYGATFWLPTIIKKMGHFNDFQVGLFNSIPWIVAIAA 325 TLLRDPQI++FC+IYF++ LTIYGATFWLP+II+KMGHFNDFQVGLFNSIPW+++I A Sbjct: 246 VWTLLRDPQILIFCVIYFSVSLTIYGATFWLPSIIRKMGHFNDFQVGLFNSIPWLISIVA 305 Query: 326 MYVFAVLAARYKKPQFWVATTLVISAIGMAVSASAGPVIGFVAVCFAGIGFKAASSLFWP 385 MY+FA+LAAR+K Q WVA L+I+A+GM + P+ FVA+CFA IGFKAAS+LFWP Sbjct: 306 MYLFAMLAARFKFQQAWVACVLLIAALGMYAAGQGSPLFSFVAICFAAIGFKAASALFWP 365 Query: 386 IPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSIQGGLYALSGASLVAAVL 445 IPQ YLDARI+AAVLALINS+GNLGGF APA FG LEQKTGSI+GGL L+ S+VAA + Sbjct: 366 IPQGYLDARISAAVLALINSIGNLGGFVAPAAFGLLEQKTGSIEGGLTGLAVMSVVAAGV 425 Query: 446 VFLARTRP 453 VF +R +P Sbjct: 426 VFFSRMKP 433