BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3622.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774583.1| transmembrane protein [Herbaspirillum serope... 570 e-160 ref|YP_004754059.1| hypothetical protein CFU_3412 [Collimonas fu... 450 e-124 ref|YP_001099746.1| hypothetical protein HEAR1448 [Herminiimonas... 414 e-113 ref|YP_001353589.1| hypothetical protein mma_1899 [Janthinobacte... 389 e-106 ref|YP_004041050.1| rhodanese domain-containing protein [Methylo... 382 e-104 >ref|YP_003774583.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62675.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 307 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 294/307 (95%), Positives = 303/307 (98%) Query: 1 METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60 METLYHLIEQYGL++VFVNVLVEQLGAPVPAYPTLI+TGALSA GRYSPA+LLL+AV AA Sbjct: 1 METLYHLIEQYGLLIVFVNVLVEQLGAPVPAYPTLILTGALSAAGRYSPAVLLLVAVCAA 60 Query: 61 LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 L+ADY WYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI Sbjct: 61 LLADYVWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180 ASALSGTMGTRR SFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLA+LGHYGMLMIA Sbjct: 121 ASALSGTMGTRRRSFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAELGHYGMLMIA 180 Query: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGA 240 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSP+SQQDGRIPGA Sbjct: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPLSQQDGRIPGA 240 Query: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRA 300 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAA+VARQLMRRGYTRVRPLTGGIDAWRA Sbjct: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAALVARQLMRRGYTRVRPLTGGIDAWRA 300 Query: 301 AGYAIDV 307 AGYAIDV Sbjct: 301 AGYAIDV 307 >ref|YP_004754059.1| hypothetical protein CFU_3412 [Collimonas fungivorans Ter331] gb|AEK63236.1| hypothetical protein CFU_3412 [Collimonas fungivorans Ter331] Length = 320 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 223/306 (72%), Positives = 263/306 (85%) Query: 1 METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60 M L+HLIEQYGL++VF NVL EQLGAPVPAYPTL+ITGAL G YS +LLL AV AA Sbjct: 14 MTYLFHLIEQYGLVIVFFNVLAEQLGAPVPAYPTLVITGALMHRGEYSAPVLLLTAVVAA 73 Query: 61 LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 LIAD+ WY+AGRRYGR+++S LCRISLSPDSCVRQTESIY RWGARSLL+AKFIPGFASI Sbjct: 74 LIADFLWYMAGRRYGRKVLSTLCRISLSPDSCVRQTESIYSRWGARSLLVAKFIPGFASI 133 Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180 ASAL+GT+GT R +F+L+D+ G+ALWAGL IFLGSLFS+ +DDLL+VL +LG YGM+++A Sbjct: 134 ASALAGTIGTSRTTFILYDSIGAALWAGLAIFLGSLFSTTIDDLLSVLTELGQYGMMLVA 193 Query: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGA 240 A FVA+KWWQRRRFR SL MARISV EL+ + ++G P I+DVRSP SQQ GRIPGA Sbjct: 194 AGFAIFVASKWWQRRRFRMSLRMARISVAELDQLFKQGITPAIVDVRSPASQQAGRIPGA 253 Query: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRA 300 TI++QEI +FVFD PV+ EV+VYCACPNEASAA+VA+QLM RGY +VRPL+GGIDAW A Sbjct: 254 RTITHQEINSFVFDAPVDQEVIVYCACPNEASAALVAKQLMLRGYKKVRPLSGGIDAWIA 313 Query: 301 AGYAID 306 AGYAID Sbjct: 314 AGYAID 319 >ref|YP_001099746.1| hypothetical protein HEAR1448 [Herminiimonas arsenicoxydans] emb|CAL61619.1| Conserved hypothetical protein, putative membrane protein [Herminiimonas arsenicoxydans] Length = 308 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 205/306 (66%), Positives = 254/306 (83%) Query: 1 METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60 M L LIEQYGL+ VF NVL+EQLGAP+PAYPTL+ITGAL G YS +LL +AV AA Sbjct: 1 MGFLLELIEQYGLLFVFANVLLEQLGAPIPAYPTLVITGALLGRGEYSAPMLLFVAVLAA 60 Query: 61 LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 LIAD+ WYLAGRRYG ++M+RLCRISLSPDSCVRQTESIYLR+G SLL+AKFIPGFAS+ Sbjct: 61 LIADFAWYLAGRRYGARVMARLCRISLSPDSCVRQTESIYLRFGPASLLVAKFIPGFASV 120 Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180 ASAL+G +GTR + F+ +DA G+ALW+G IFLGSLFSSAV DLL++LA LG +G++++A Sbjct: 121 ASALAGAIGTRSVKFIFFDALGAALWSGSAIFLGSLFSSAVSDLLDILASLGKWGLVLVA 180 Query: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGA 240 VALA ++A KWWQR F K L MARISVDEL+ +L++GN PTIIDVRS +QQ GRIPGA Sbjct: 181 VALAIYIARKWWQRHSFLKDLRMARISVDELDQLLKQGNPPTIIDVRSDFAQQGGRIPGA 240 Query: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRA 300 + +S+++I V + + EV+VYCACPNE SAA +AR+LM+RGYTRVRPLTGGI+AW A Sbjct: 241 MVLSDEDISALVINTETDSEVIVYCACPNEVSAARIARKLMQRGYTRVRPLTGGIEAWVA 300 Query: 301 AGYAID 306 AG+++D Sbjct: 301 AGFSVD 306 >ref|YP_001353589.1| hypothetical protein mma_1899 [Janthinobacterium sp. Marseille] gb|ABR90266.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 309 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 199/306 (65%), Positives = 253/306 (82%) Query: 1 METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60 M L +LIEQYGL+ VF NVL+EQLGAP+PAYPTL+ITGAL G YS +LLL+AV AA Sbjct: 1 MSFLLNLIEQYGLLFVFGNVLLEQLGAPIPAYPTLVITGALLDRGDYSAPMLLLVAVVAA 60 Query: 61 LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 LIAD+ WY+AGRRYG ++M+RLC+ISLSPDSCVRQTE++Y+R+G SLL+AKFIPGFAS+ Sbjct: 61 LIADFAWYMAGRRYGGRVMARLCKISLSPDSCVRQTEAMYIRYGPASLLVAKFIPGFASV 120 Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180 ASAL+G +GTR F+++DA G+ALWAG IFLGSLFSSAV DLL++LA LG +G+L++A Sbjct: 121 ASALAGAIGTRPAKFIIFDALGAALWAGSAIFLGSLFSSAVADLLDILASLGKWGILLVA 180 Query: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGA 240 +A A ++A KWWQR F K L MARI+VDEL+ +L+ G PTIIDVRS ++QQ G+IPGA Sbjct: 181 LAFAVYLAKKWWQRHSFLKDLRMARITVDELDQLLKNGTPPTIIDVRSGLAQQSGKIPGA 240 Query: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRA 300 + +S+ +I V + ++ EV+VYCACPNEASAA +A++LM RGY RVRPLTGGIDAW A Sbjct: 241 MVLSDDDISALVVNTELDSEVIVYCACPNEASAARIAKKLMARGYRRVRPLTGGIDAWVA 300 Query: 301 AGYAID 306 AG++ID Sbjct: 301 AGHSID 306 >ref|YP_004041050.1| rhodanese domain-containing protein [Methylovorus sp. MP688] gb|ADQ85814.1| Rhodanese domain protein [Methylovorus sp. MP688] Length = 307 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 176/306 (57%), Positives = 245/306 (80%) Query: 1 METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60 M+ L L++QYGL++VF NV +EQ+G P+PAYPTL++TGA+ G+YSPA LLL AV A+ Sbjct: 1 MQHLLDLLQQYGLLIVFANVFLEQIGLPIPAYPTLLVTGAMLTQGQYSPAQLLLTAVIAS 60 Query: 61 LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120 L+AD WY AGRR+GR++MS+LCRISLSPDSCVRQTES+YLR G +LL KFIPGFAS+ Sbjct: 61 LLADLAWYFAGRRFGRRVMSKLCRISLSPDSCVRQTESVYLRIGPPALLFCKFIPGFASV 120 Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180 +SAL+GT+GTR +F+++D+ G+A+WAG I LG+LFSSA+D+LL++L+++G +G L++ Sbjct: 121 SSALAGTVGTRATTFIIFDSLGAAIWAGSAIVLGTLFSSAIDELLDILSEMGKWGALLLG 180 Query: 181 VALAAFVANKWWQRRRFRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGA 240 +AL AF+ NKWW+R RF KSL MARISVDEL+TML+ G+ P I+D R Q DGRIPGA Sbjct: 181 IALVAFILNKWWERHRFIKSLRMARISVDELDTMLKSGSRPVIVDARPAHLQGDGRIPGA 240 Query: 241 VTISNQEIQTFVFDGPVEGEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRA 300 ++++ I + D ++ ++V+YC+CPN+ +AA +A+ L++RGY +VRPL GGIDAW Sbjct: 241 LSMTEDTIDSVFIDTDIDTDIVLYCSCPNDVTAAKMAKLLIKRGYHKVRPLKGGIDAWVD 300 Query: 301 AGYAID 306 AG+ I+ Sbjct: 301 AGFKIE 306