BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3621.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774584.1| regulator of disulfide bond formation redox ...   219   9e-56
ref|YP_004753012.1| hypothetical protein CFU_2362 [Collimonas fu...   173   9e-42
ref|ZP_05041711.1| OsmC-like protein [Alcanivorax sp. DG881] >gi...   139   1e-31
ref|YP_001413413.1| OsmC family protein [Parvibaculum lavamentiv...   135   3e-30
ref|ZP_08264057.1| osmC-like family protein [Asticcacaulis bipro...   121   3e-26

>ref|YP_003774584.1| regulator of disulfide bond formation redox protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62676.1| regulator of disulfide bond formation redox protein [Herbaspirillum
           seropedicae SmR1]
          Length = 128

 Score =  219 bits (559), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 115/128 (89%), Positives = 119/128 (92%)

Query: 1   MATIHLHNDAGYAQRIRARTHQLQADEPAGNGGSDTGPAPYELLLAALASCTSLTLRMYA 60
           MA + LHN AGYAQ I+AR HQL++DEP  NGG DTGPAPYELLLAALASCTSLTLRMYA
Sbjct: 1   MAHVTLHNAAGYAQDIKARIHQLKSDEPESNGGKDTGPAPYELLLAALASCTSLTLRMYA 60

Query: 61  DRKGWDLGSISVDAHFGRDDSGLETITRKISFGNALSQEQLTRLAEICEKTPVTKTIRQG 120
           DRKGWDLGSISVDAHFGRDDSGLETITRKISFGN LSQEQLTRLAEICEKTPVTKTIRQG
Sbjct: 61  DRKGWDLGSISVDAHFGRDDSGLETITRKISFGNTLSQEQLTRLAEICEKTPVTKTIRQG 120

Query: 121 TAIQTSMA 128
           TAIQTSMA
Sbjct: 121 TAIQTSMA 128


>ref|YP_004753012.1| hypothetical protein CFU_2362 [Collimonas fungivorans Ter331]
 gb|AEK62189.1| hypothetical protein CFU_2362 [Collimonas fungivorans Ter331]
          Length = 136

 Score =  173 bits (438), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 86/127 (67%), Positives = 102/127 (80%)

Query: 1   MATIHLHNDAGYAQRIRARTHQLQADEPAGNGGSDTGPAPYELLLAALASCTSLTLRMYA 60
           MA++HL +  GY Q+I+AR+HQLQADEP  NGG+D+GPAPYELLLA LA+CTSLTLRMYA
Sbjct: 1   MASVHLQSITGYVQQIQARSHQLQADEPLDNGGTDSGPAPYELLLAGLAACTSLTLRMYA 60

Query: 61  DRKGWDLGSISVDAHFGRDDSGLETITRKISFGNALSQEQLTRLAEICEKTPVTKTIRQG 120
           DRK W+LG I V   F RD+ G E I R ++FG  LS EQ+ RL EICEKTPVTKTIRQG
Sbjct: 61  DRKQWELGLIDVRMRFSRDEQGREKIDRTVAFGARLSPEQIGRLGEICEKTPVTKTIRQG 120

Query: 121 TAIQTSM 127
           T IQT++
Sbjct: 121 TEIQTTL 127


>ref|ZP_05041711.1| OsmC-like protein [Alcanivorax sp. DG881]
 gb|EDX89132.1| OsmC-like protein [Alcanivorax sp. DG881]
          Length = 128

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/127 (59%), Positives = 88/127 (69%), Gaps = 1/127 (0%)

Query: 1   MATIHLHNDAGYAQRIRARTHQLQADEPAGNGGSDTGPAPYELLLAALASCTSLTLRMYA 60
           MAT+ LH+   YAQ+I  R H+L ADE A  GG D+GP PYELLL+ L +CTS+TLRMYA
Sbjct: 1   MATVSLHSHHHYAQQINVRQHRLNADEGAAMGGEDSGPNPYELLLSGLGACTSITLRMYA 60

Query: 61  DRKGWDLGSISVDAHFGRDDSGLETITRKISFGNALSQEQLTRLAEICEKTPVTKTIRQG 120
           +RKGW+LG I V   F RD+ G E I R +     LS EQ  RL EI  KTPVTKT+RQG
Sbjct: 61  ERKGWELGDIDVRLDFYRDEEGGEHIDRTLVCSAPLSDEQRQRLLEIAAKTPVTKTVRQG 120

Query: 121 TAIQTSM 127
            AI TSM
Sbjct: 121 VAI-TSM 126


>ref|YP_001413413.1| OsmC family protein [Parvibaculum lavamentivorans DS-1]
 gb|ABS63756.1| OsmC family protein [Parvibaculum lavamentivorans DS-1]
          Length = 129

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 71/126 (56%), Positives = 93/126 (73%), Gaps = 1/126 (0%)

Query: 1   MAT-IHLHNDAGYAQRIRARTHQLQADEPAGNGGSDTGPAPYELLLAALASCTSLTLRMY 59
           MAT +HL + +G  Q I AR H++ ADEP  N G+D GPAPYELLLA+LA+C+S TLRMY
Sbjct: 1   MATSVHLTSTSGVFQEIEARQHRMTADEPTNNHGTDKGPAPYELLLASLAACSSATLRMY 60

Query: 60  ADRKGWDLGSISVDAHFGRDDSGLETITRKISFGNALSQEQLTRLAEICEKTPVTKTIRQ 119
           +DRKG+ LG+I+ D  F RD  G E+I R ISF    ++EQ+ R+ +I EKTPVTKT+++
Sbjct: 61  SDRKGFALGTITADLAFKRDRDGNESIERVISFSEKPTEEQMERIRDIIEKTPVTKTLKR 120

Query: 120 GTAIQT 125
           GT I T
Sbjct: 121 GTPITT 126


>ref|ZP_08264057.1| osmC-like family protein [Asticcacaulis biprosthecum C19]
 gb|EGF93661.1| osmC-like family protein [Asticcacaulis biprosthecum C19]
          Length = 129

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/127 (50%), Positives = 88/127 (69%), Gaps = 1/127 (0%)

Query: 2   ATIHLHNDAGYAQRIRARTHQLQADEPAGNGGSDTGPAPYELLLAALASCTSLTLRMYAD 61
           AT H+  +A YA +I      L ADEP GNGG + G APY+LLL++L++CT++TLRMYAD
Sbjct: 4   ATAHIGTEA-YATQIETAGRTLIADEPEGNGGKNAGLAPYDLLLSSLSACTAITLRMYAD 62

Query: 62  RKGWDLGSISVDAHFGRDDSGLETITRKISFGNALSQEQLTRLAEICEKTPVTKTIRQGT 121
           RK W + S  V  HF RDD+G E I R +     L ++Q+ RL ++ E+TPVTKT++QG 
Sbjct: 63  RKQWPMESAEVALHFYRDDTGKEFIDRTLLLSGPLDKDQIARLLDVSERTPVTKTLKQGL 122

Query: 122 AIQTSMA 128
            I+TS+A
Sbjct: 123 TIKTSLA 129