BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3620.p (192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774590.1| superoxide dismutase [Fe] protein [Herbaspir... 360 5e-98 ref|YP_002982341.1| superoxide dismutase [Ralstonia pickettii 12... 322 2e-86 ref|YP_001900359.1| Superoxide dismutase [Ralstonia pickettii 12... 322 2e-86 ref|YP_003751598.1| superoxide dismutase [Ralstonia solanacearum... 317 5e-85 emb|CBJ37054.1| superoxide dismutase [Ralstonia solanacearum CMR15] 317 6e-85 >ref|YP_003774590.1| superoxide dismutase [Fe] protein [Herbaspirillum seropedicae SmR1] emb|CAM32606.1| Superoxide dismutase [Fe] protein [Herbaspirillum seropedicae] gb|ADJ62682.1| superoxide dismutase [Fe] protein [Herbaspirillum seropedicae SmR1] Length = 192 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 186/192 (96%), Positives = 190/192 (98%) Query: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFEHLSLEEIIKKS 60 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFE+LSLEEIIKKS Sbjct: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 Query: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG Sbjct: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 Query: 121 SGWTWLVKKADGSLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVEAFWG 180 SGWTWLVKKADG+LDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVE +WG Sbjct: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180 Query: 181 IVNWDFAAKNFA 192 I+NWDF AKNFA Sbjct: 181 IINWDFVAKNFA 192 >ref|YP_002982341.1| superoxide dismutase [Ralstonia pickettii 12D] ref|ZP_07676163.1| superoxide dismutase [Fe] [Ralstonia sp. 5_7_47FAA] gb|ACS63669.1| Superoxide dismutase [Ralstonia pickettii 12D] gb|EFP65501.1| superoxide dismutase [Fe] [Ralstonia sp. 5_7_47FAA] Length = 233 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 158/192 (82%), Positives = 171/192 (89%) Query: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFEHLSLEEIIKKS 60 M HTLP LPY DALAP ISKETLE+HYGKHHQTYVTNLNNLI GTEFE+LSLE+I+KKS Sbjct: 42 MEHTLPPLPYAQDALAPHISKETLEFHYGKHHQTYVTNLNNLIKGTEFENLSLEDIVKKS 101 Query: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGG+FNNAAQVWNHTFYWNGL P+G GAP+GALADAINAKWGSFD FK EFTK + FG Sbjct: 102 SGGVFNNAAQVWNHTFYWNGLKPQGGGAPTGALADAINAKWGSFDKFKEEFTKTAIGTFG 161 Query: 121 SGWTWLVKKADGSLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVEAFWG 180 SGW WLVKKADGSLD+V+T+ A TPLTTD+KPLLT DVWEHAYYIDYRNAR KYVEAFW Sbjct: 162 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWN 221 Query: 181 IVNWDFAAKNFA 192 +VNWDF AKNFA Sbjct: 222 LVNWDFVAKNFA 233 >ref|YP_001900359.1| Superoxide dismutase [Ralstonia pickettii 12J] gb|ACD27927.1| Superoxide dismutase [Ralstonia pickettii 12J] Length = 233 Score = 322 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 158/192 (82%), Positives = 171/192 (89%) Query: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFEHLSLEEIIKKS 60 M HTLP LPY DALAP ISKETLE+HYGKHHQTYVTNLNNLI GTEFE+LSLE+I+KKS Sbjct: 42 MEHTLPPLPYAQDALAPHISKETLEFHYGKHHQTYVTNLNNLIKGTEFENLSLEDIVKKS 101 Query: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGG+FNNAAQVWNHTFYWNGL P+G GAP+GALADAINAKWGSFD FK EFTK + FG Sbjct: 102 SGGVFNNAAQVWNHTFYWNGLKPQGGGAPTGALADAINAKWGSFDKFKEEFTKTAIGTFG 161 Query: 121 SGWTWLVKKADGSLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVEAFWG 180 SGW WLVKKADGSLD+V+T+ A TPLTTD+KPLLT DVWEHAYYIDYRNAR KYVEAFW Sbjct: 162 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWN 221 Query: 181 IVNWDFAAKNFA 192 +VNWDF AKNFA Sbjct: 222 LVNWDFVAKNFA 233 >ref|YP_003751598.1| superoxide dismutase [Ralstonia solanacearum PSI07] emb|CBJ50299.1| superoxide dismutase [Ralstonia solanacearum PSI07] emb|CCA79660.1| superoxide dismutase [blood disease bacterium R229] Length = 192 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 160/192 (83%), Positives = 172/192 (89%) Query: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFEHLSLEEIIKKS 60 MAHTLP LPY LDALAP ISKETLE+HYGKHHQTYVTNLNNLIPGTEFE+LSLE+I+KKS Sbjct: 1 MAHTLPPLPYALDALAPHISKETLEFHYGKHHQTYVTNLNNLIPGTEFENLSLEDIVKKS 60 Query: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGGIFNNAAQVWNHTFYWNGL P G GAP+GALADAINAKWGSFD FK EFTK + FG Sbjct: 61 SGGIFNNAAQVWNHTFYWNGLKPNGGGAPTGALADAINAKWGSFDKFKEEFTKVAIGTFG 120 Query: 121 SGWTWLVKKADGSLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVEAFWG 180 SGW WLVKKADGSLD+V+T+ A TPLTTD+KPLLT DVWEHAYYIDYRNAR KYVEAFW Sbjct: 121 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWN 180 Query: 181 IVNWDFAAKNFA 192 +VNWDF A +FA Sbjct: 181 LVNWDFVANHFA 192 >emb|CBJ37054.1| superoxide dismutase [Ralstonia solanacearum CMR15] Length = 192 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 160/192 (83%), Positives = 172/192 (89%) Query: 1 MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFEHLSLEEIIKKS 60 MAHTLP LPY LDALAP ISKETLE+HYGKHHQTYVTNLNNLIPGTEFE+LSLE+I+KKS Sbjct: 1 MAHTLPQLPYALDALAPHISKETLEFHYGKHHQTYVTNLNNLIPGTEFENLSLEDIVKKS 60 Query: 61 SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGG+FNNAAQVWNHTFYWNGL P G GAP+GALADAINAKWGSFDAFK FTK + FG Sbjct: 61 SGGLFNNAAQVWNHTFYWNGLKPNGGGAPTGALADAINAKWGSFDAFKEAFTKVAIGTFG 120 Query: 121 SGWTWLVKKADGSLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVEAFWG 180 SGW WLVKKADGSLD+V+T+ A TPLTTD+KPLLT DVWEHAYYIDYRNAR KYVEAFW Sbjct: 121 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWS 180 Query: 181 IVNWDFAAKNFA 192 +VNWDF A NFA Sbjct: 181 LVNWDFVASNFA 192