BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3618.p (468 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herb... 699 0.0 ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Jant... 580 e-163 ref|YP_004751871.1| exodeoxyribonuclease VII large subunit [Coll... 572 e-161 ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herm... 563 e-158 ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalo... 552 e-155 >ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62683.1| exodeoxyribonuclease VII, large subunit protein [Herbaspirillum seropedicae SmR1] Length = 438 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 383/438 (87%), Positives = 409/438 (93%) Query: 31 ILTVSGLNQAVARMLERNFPLIWVKGEISNFTRAASGHWYFNLKDDGAQVRAVMFKGRAQ 90 +LTVS LNQAV RMLERNFPL+WVKGE+SNFTRAASGHWYFNLKD+GAQVRAVMFKGRAQ Sbjct: 1 MLTVSALNQAVGRMLERNFPLLWVKGEVSNFTRAASGHWYFNLKDEGAQVRAVMFKGRAQ 60 Query: 91 YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFVQLKERLEREGLFD 150 YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAF+QLKERLEREGLF Sbjct: 61 YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFLQLKERLEREGLFA 120 Query: 151 RDRKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVILYPTPVQGEGSAQRIANA 210 R+RKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEV+LYPTPVQGEG+ QRIA A Sbjct: 121 RERKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVVLYPTPVQGEGAGQRIAAA 180 Query: 211 IRTASARAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAAAMPVISGVGHETDFTIADFA 270 I AS RAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAA MPVISGVGHETDFTIADFA Sbjct: 181 IGRASERAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAATMPVISGVGHETDFTIADFA 240 Query: 271 ADLRAPTPTAAAELAATAREDWLAELRGHANDLTRALRRNLTEKAQTVDWLSRRLVNPSA 330 ADLRAPTPTAAAELAA++R+DWLAELRGHA DLTRALRR L +KAQ+VDWLSRRLV+PSA Sbjct: 241 ADLRAPTPTAAAELAASSRQDWLAELRGHAADLTRALRRTLADKAQSVDWLSRRLVSPSA 300 Query: 331 YIQHERVKLAALQTRLAHATRVPLTRMRHRLQQLATHLSHQIPDTAHARRDLLDLTRRLQ 390 YIQHERVKL ALQ RL+HA ++PLTRMRH LQQLA+ L+HQ+PDT HARRDL +L RRLQ Sbjct: 301 YIQHERVKLLALQNRLSHANQIPLTRMRHGLQQLASRLAHQLPDTRHARRDLAELARRLQ 360 Query: 391 GAQAARQLRQRQALAGLSTQLELLNPQRTLERGYAIVSDRQGRVLHAPAELAARSEVTIR 450 AQ A+Q QRQ L L +QLELLNPQRTLERGYAIVSD QGRVLH+PAELAARSE+TIR Sbjct: 361 RAQGAQQSAQRQTLTTLHSQLELLNPQRTLERGYAIVSDHQGRVLHSPAELAARSEITIR 420 Query: 451 LAEGSAEVGIASVQPRLD 468 LA+GSAEVGIASVQPRLD Sbjct: 421 LAQGSAEVGIASVQPRLD 438 >ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp. Marseille] sp|A6T178|EX7L_JANMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gb|ABR88515.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp. Marseille] Length = 453 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 309/438 (70%), Positives = 357/438 (81%) Query: 31 ILTVSGLNQAVARMLERNFPLIWVKGEISNFTRAASGHWYFNLKDDGAQVRAVMFKGRAQ 90 +L+VS LNQAV+RMLERNFPL WV GEISNFT AASGHWYF LKD AQVRAVMF+GRAQ Sbjct: 16 VLSVSALNQAVSRMLERNFPLSWVSGEISNFTCAASGHWYFTLKDSAAQVRAVMFRGRAQ 75 Query: 91 YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFVQLKERLEREGLFD 150 YA FMPREGDKVEVR LVTLYAPRGDYQL+VEAIRR+GVG+LY AF+QLKE+L EGLFD Sbjct: 76 YADFMPREGDKVEVRALVTLYAPRGDYQLSVEAIRRAGVGNLYEAFLQLKEKLNAEGLFD 135 Query: 151 RDRKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVILYPTPVQGEGSAQRIANA 210 RKRA+P F R IGIVTSPQAAALRD+LTTL+RRAPHV VILYPTPVQGEGSA +IA A Sbjct: 136 PARKRAIPSFARTIGIVTSPQAAALRDILTTLQRRAPHVRVILYPTPVQGEGSANKIAQA 195 Query: 211 IRTASARAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAAAMPVISGVGHETDFTIADFA 270 I TASARAECDVLLVCRGGGSIEDLWSFN E+VAR IV +PVI GVGHETDFTIADFA Sbjct: 196 IATASARAECDVLLVCRGGGSIEDLWSFNHELVARTIVGCDIPVIVGVGHETDFTIADFA 255 Query: 271 ADLRAPTPTAAAELAATAREDWLAELRGHANDLTRALRRNLTEKAQTVDWLSRRLVNPSA 330 ADLRAPTPTAAAELAAT R DWLA L A+D+ L+R L++ AQT+DWLSRRL++P+A Sbjct: 256 ADLRAPTPTAAAELAATPRADWLARLEAQADDMRYVLKRQLSDTAQTLDWLSRRLISPAA 315 Query: 331 YIQHERVKLAALQTRLAHATRVPLTRMRHRLQQLATHLSHQIPDTAHARRDLLDLTRRLQ 390 YI HER+KL LQ RL HATR+PL++ + L QL Q+PDT R +++ RR+ Sbjct: 316 YIAHERMKLQNLQARLGHATRIPLSKAQFALAQLRNRWLSQLPDTQAQRLHVINHARRMS 375 Query: 391 GAQAARQLRQRQALAGLSTQLELLNPQRTLERGYAIVSDRQGRVLHAPAELAARSEVTIR 450 QRQ+LA LS QLE+LNPQRTLERGYA+++D +G+++ AP EL R VT+R Sbjct: 376 NQINNHIASQRQSLAALSAQLEMLNPQRTLERGYAMITDEKGKIVRAPKELQPRQSVTVR 435 Query: 451 LAEGSAEVGIASVQPRLD 468 LA+G+A+VGIASVQ L+ Sbjct: 436 LADGTAQVGIASVQETLE 453 >ref|YP_004751871.1| exodeoxyribonuclease VII large subunit [Collimonas fungivorans Ter331] gb|AEK61048.1| Exodeoxyribonuclease VII large subunit [Collimonas fungivorans Ter331] Length = 509 Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 322/458 (70%), Positives = 364/458 (79%), Gaps = 3/458 (0%) Query: 14 PRPEAMPAAAATD---GGPPILTVSGLNQAVARMLERNFPLIWVKGEISNFTRAASGHWY 70 PR M ++ TD GPP+LTVS LNQAVAR+LER+FPL WV GEISNF ASGHWY Sbjct: 52 PRKARMNFSSDTDLRSSGPPVLTVSALNQAVARLLERSFPLAWVAGEISNFKSYASGHWY 111 Query: 71 FNLKDDGAQVRAVMFKGRAQYAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVG 130 F LKDD AQVR VMFKGRAQ+AGF PR+GDKVEVR LVTLYA RGDYQLNVEAIRR+GVG Sbjct: 112 FTLKDDAAQVRGVMFKGRAQHAGFTPRDGDKVEVRALVTLYAARGDYQLNVEAIRRAGVG 171 Query: 131 DLYAAFVQLKERLEREGLFDRDRKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVE 190 +LY AF++LKE+L EGLFD RKR LP F R IGIVTS QAAALRD+L+ L RRAPHV Sbjct: 172 NLYEAFLRLKEKLNAEGLFDPARKRPLPPFARTIGIVTSLQAAALRDILSALARRAPHVR 231 Query: 191 VILYPTPVQGEGSAQRIANAIRTASARAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAA 250 VILYPTPVQG+G+A++IA AI TA+ARAEC++LLVCRGGGSIEDLWSFN+E VARAIVAA Sbjct: 232 VILYPTPVQGDGAAEKIARAINTAAARAECELLLVCRGGGSIEDLWSFNDEAVARAIVAA 291 Query: 251 AMPVISGVGHETDFTIADFAADLRAPTPTAAAELAATAREDWLAELRGHANDLTRALRRN 310 MPVISGVGHETDFTIADFAADLRA TPTAAAELA R +WLA L HA+DLTRALRR Sbjct: 292 PMPVISGVGHETDFTIADFAADLRAATPTAAAELATVPRAEWLATLETHADDLTRALRRR 351 Query: 311 LTEKAQTVDWLSRRLVNPSAYIQHERVKLAALQTRLAHATRVPLTRMRHRLQQLATHLSH 370 L E QT+DWLSRRL +P+ I HERVKL +LQ RL HATR+PLT+ RH L L T + Sbjct: 352 LAETGQTLDWLSRRLSSPATTIAHERVKLQSLQARLLHATRIPLTQSRHALLNLRTRWAA 411 Query: 371 QIPDTAHARRDLLDLTRRLQGAQAARQLRQRQALAGLSTQLELLNPQRTLERGYAIVSDR 430 QIP T R LL+ +RRL A AA+ +RQALA L+ QLELLNPQRTLERGYAIVSD Sbjct: 412 QIPSTIAPRIALLEQSRRLNAALAAQNRDRRQALAALNAQLELLNPQRTLERGYAIVSDA 471 Query: 431 QGRVLHAPAELAARSEVTIRLAEGSAEVGIASVQPRLD 468 +G V+ P L R +T++LAEGSA+VGI SVQ LD Sbjct: 472 KGHVIRTPQALQPRHVITVQLAEGSAQVGIDSVQATLD 509 >ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herminiimonas arsenicoxydans] sp|A4G7Y7|EX7L_HERAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit emb|CAL62624.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Herminiimonas arsenicoxydans] Length = 453 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 311/459 (67%), Positives = 357/459 (77%), Gaps = 7/459 (1%) Query: 10 PAARPRPEAMPAAAATDGGPPILTVSGLNQAVARMLERNFPLIWVKGEISNFTRAASGHW 69 P P P P + +LTVS LNQAV+RMLER+FPL W+ GEISNFTRAASGHW Sbjct: 2 PTDYPNPNQTPTSN-------VLTVSALNQAVSRMLERSFPLTWIAGEISNFTRAASGHW 54 Query: 70 YFNLKDDGAQVRAVMFKGRAQYAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGV 129 YF LKDD AQVRAVMF+GRAQY FMPREGD+VEVR LVTLYAPRGDYQL+VEAIRR+GV Sbjct: 55 YFTLKDDAAQVRAVMFRGRAQYTDFMPREGDRVEVRALVTLYAPRGDYQLSVEAIRRAGV 114 Query: 130 GDLYAAFVQLKERLEREGLFDRDRKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHV 189 G+LY AF+QLKE+L EGLFD RKR LP F R IGIVTSPQAAALRD+LTTL+RRAPHV Sbjct: 115 GNLYEAFLQLKEKLATEGLFDPARKRPLPLFARTIGIVTSPQAAALRDILTTLQRRAPHV 174 Query: 190 EVILYPTPVQGEGSAQRIANAIRTASARAECDVLLVCRGGGSIEDLWSFNEEVVARAIVA 249 ILYPTPVQGEG+A +IA AI TASARAECDVLLVCRGGGSIEDLWSFN E+VAR IV Sbjct: 175 RAILYPTPVQGEGAANKIAQAIATASARAECDVLLVCRGGGSIEDLWSFNHEIVARTIVG 234 Query: 250 AAMPVISGVGHETDFTIADFAADLRAPTPTAAAELAATAREDWLAELRGHANDLTRALRR 309 +PVI GVGHETDFTIADFAAD+RAPTPTAAAELAAT R +WLA L+ A+D+ RAL+R Sbjct: 235 CDIPVIVGVGHETDFTIADFAADVRAPTPTAAAELAATPRTEWLARLQTEADDMRRALKR 294 Query: 310 NLTEKAQTVDWLSRRLVNPSAYIQHERVKLAALQTRLAHATRVPLTRMRHRLQQLATHLS 369 L++ AQT+DWLSRRL++PSA I H+++KL LQ RL HATR+PL + + L L Sbjct: 295 QLSDTAQTLDWLSRRLISPSATIAHKQMKLQNLQARLGHATRIPLGKAQFALAHLRNRWL 354 Query: 370 HQIPDTAHARRDLLDLTRRLQGAQAARQLRQRQALAGLSTQLELLNPQRTLERGYAIVSD 429 Q+PDT R + + RRL R Q Q L LS QLE+LNPQRTLERGYAIVSD Sbjct: 355 TQLPDTRIQRARVAEHARRLSNQMKTRSATQEQRLRALSAQLEMLNPQRTLERGYAIVSD 414 Query: 430 RQGRVLHAPAELAARSEVTIRLAEGSAEVGIASVQPRLD 468 +G ++ AP EL R VT+RLAEGSA++GIASVQ L+ Sbjct: 415 EKGHIVRAPQELRPRQNVTVRLAEGSAQIGIASVQQTLE 453 >ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF31232.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium IMCC9480] Length = 454 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 304/442 (68%), Positives = 361/442 (81%) Query: 26 DGGPPILTVSGLNQAVARMLERNFPLIWVKGEISNFTRAASGHWYFNLKDDGAQVRAVMF 85 D P+LTVS LNQAV+RMLERNFPL+WV GE+SNFTRAASGHWYF+LKD AQVRAVMF Sbjct: 11 DTASPVLTVSALNQAVSRMLERNFPLMWVAGEVSNFTRAASGHWYFSLKDASAQVRAVMF 70 Query: 86 KGRAQYAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFVQLKERLER 145 +GRAQYAGF+P+EGDKVEVRTLVTLYA RGD+QL+VEAIRR+GVG+L+ AF+QLK++LE Sbjct: 71 RGRAQYAGFIPKEGDKVEVRTLVTLYAARGDFQLSVEAIRRAGVGNLFEAFLQLKQKLES 130 Query: 146 EGLFDRDRKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVILYPTPVQGEGSAQ 205 EGLFD RKRALP FPR IGIVTS QAAALRDVL TL+RR PH+ VILYPTPVQG+G+AQ Sbjct: 131 EGLFDPARKRALPVFPRTIGIVTSLQAAALRDVLATLKRRTPHIRVILYPTPVQGDGAAQ 190 Query: 206 RIANAIRTASARAECDVLLVCRGGGSIEDLWSFNEEVVARAIVAAAMPVISGVGHETDFT 265 +IA AI TAS RAECD+LL+CRGGGSIEDLWSFN+E VAR I A +PVI+G+GHETDFT Sbjct: 191 KIAQAIATASYRAECDLLLLCRGGGSIEDLWSFNDETVARTIAACTVPVIAGIGHETDFT 250 Query: 266 IADFAADLRAPTPTAAAELAATAREDWLAELRGHANDLTRALRRNLTEKAQTVDWLSRRL 325 IADFAADLRAPTPTAAAELAA R +W+A + A +L+R RR++T+++Q +DWLSRRL Sbjct: 251 IADFAADLRAPTPTAAAELAAPPRAEWIAHIEQVARNLSRMARRHVTDRSQGLDWLSRRL 310 Query: 326 VNPSAYIQHERVKLAALQTRLAHATRVPLTRMRHRLQQLATHLSHQIPDTAHARRDLLDL 385 V+P+A I+HE+V LA Q RL +ATR PL RH L+ L + L+ Q+PDT AR L + Sbjct: 311 VSPAATIRHEQVLLAGWQVRLGNATRTPLNNARHALRHLRSQLTSQLPDTRPARWQLTEQ 370 Query: 386 TRRLQGAQAARQLRQRQALAGLSTQLELLNPQRTLERGYAIVSDRQGRVLHAPAELAARS 445 RR+ +R R R L+GL QLELLNPQRTLERGYAI+ D +GR+ PA+L AR Sbjct: 371 RRRMASGIGSRTSRLRLQLSGLEAQLELLNPQRTLERGYAIIVDAEGRIARTPAQLHARE 430 Query: 446 EVTIRLAEGSAEVGIASVQPRL 467 VT+RLAEGSA +GIASVQP L Sbjct: 431 IVTVRLAEGSARIGIASVQPTL 452