BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3610.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774598.1| type II 3-hydroxyacyl-CoA dehydrogenase [Her... 387 e-105 ref|ZP_02884681.1| short-chain dehydrogenase/reductase SDR [Burk... 327 9e-88 ref|XP_002534847.1| hydroxyacyl dehydrogenase, putative [Ricinus... 321 1e-85 ref|YP_725118.1| Short-chain alcohol dehydrogenase/3-hydroxyacyl... 320 1e-85 ref|YP_004684474.1| short-chain alcohol dehydrogenase/3-hydroxya... 320 2e-85 >ref|YP_003774598.1| type II 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62690.1| 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 252 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 233/252 (92%), Positives = 245/252 (97%) Query: 26 MRIEGNVFIVTGAASGLGAATARMIAAAGGKPVLADLNEEAGSALARELGGVFVRCDVSS 85 MRIEG+VFI+TGAASGLGAATARMIAAAGGKPVLADLN+EAG LA ELGGVFVRCDVSS Sbjct: 1 MRIEGHVFIITGAASGLGAATARMIAAAGGKPVLADLNQEAGEPLAAELGGVFVRCDVSS 60 Query: 86 EDDAQAVVRAAQAAGSLRGLVNCAGIAPAEKLVGKNGPHSMALFMKTLNINLVGSFNMAR 145 E+DAQAVVRAA+A GSLRGLVNCAGIAPAEKLVGK+GPH+MALFMKTLNINLVGSFNMAR Sbjct: 61 EEDAQAVVRAAEALGSLRGLVNCAGIAPAEKLVGKSGPHTMALFMKTLNINLVGSFNMAR 120 Query: 146 FAADAMARTEAQEEGERGIIIHTASVAAYDGQIGQTAYSASKGAIVAMTLPMARDLSRSG 205 FAA+AMAR+ A EEGERG+IIHTASVAAYDGQIGQTAY+ASKGAIVAMTLPMAR+LSRSG Sbjct: 121 FAAEAMARSAAVEEGERGVIIHTASVAAYDGQIGQTAYAASKGAIVAMTLPMARELSRSG 180 Query: 206 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRATEYAQLARTIIENVMLNGET 265 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRA EYAQLARTIIENVMLNGET Sbjct: 181 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRAAEYAQLARTIIENVMLNGET 240 Query: 266 IRLDGAIRMQPK 277 IRLDGAIRMQPK Sbjct: 241 IRLDGAIRMQPK 252 >ref|ZP_02884681.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] gb|EDT09846.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] Length = 252 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 175/252 (69%), Positives = 208/252 (82%) Query: 26 MRIEGNVFIVTGAASGLGAATARMIAAAGGKPVLADLNEEAGSALARELGGVFVRCDVSS 85 M I N F++TG ASGLGAATAR++A GGK VLADLN++AG ALA+ELGGVFV+CDVS Sbjct: 1 MEIRDNAFLITGGASGLGAATARLLAENGGKVVLADLNQDAGEALAKELGGVFVKCDVSR 60 Query: 86 EDDAQAVVRAAQAAGSLRGLVNCAGIAPAEKLVGKNGPHSMALFMKTLNINLVGSFNMAR 145 EDDA V AA G+LRGL+NCAG+APA K VGK+GPH + F +T++INL+G+FNM R Sbjct: 61 EDDATRAVEAATKLGTLRGLINCAGVAPAAKTVGKDGPHPLDAFARTISINLIGTFNMIR 120 Query: 146 FAADAMARTEAQEEGERGIIIHTASVAAYDGQIGQTAYSASKGAIVAMTLPMARDLSRSG 205 AA AM++ E GERG+II+TASVAAYDGQIGQ AY+ASKG +V MTLP+ARDLSR+ Sbjct: 121 LAATAMSKNEPNANGERGVIINTASVAAYDGQIGQAAYAASKGGVVGMTLPIARDLSRNA 180 Query: 206 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRATEYAQLARTIIENVMLNGET 265 IRVMTIAPGIFETPM+L MPQEV+D+LG VPFPPRLG+ EYA LA+ I++N MLNGE Sbjct: 181 IRVMTIAPGIFETPMLLGMPQEVQDALGAMVPFPPRLGKPIEYAMLAKQILDNPMLNGEV 240 Query: 266 IRLDGAIRMQPK 277 IRLDGAIRMQPK Sbjct: 241 IRLDGAIRMQPK 252 >ref|XP_002534847.1| hydroxyacyl dehydrogenase, putative [Ricinus communis] gb|EEF27536.1| hydroxyacyl dehydrogenase, putative [Ricinus communis] Length = 433 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 190/254 (74%), Positives = 211/254 (83%), Gaps = 2/254 (0%) Query: 26 MRIEGNVFIVTGAASGLGAATARMIAAAGGKPVLADLNEEAGSALARELGGV--FVRCDV 83 M+I+ NVFIVTG ASGLGAATAR I AGGK VLAD+ +EAG+ALA ELG FV+CDV Sbjct: 180 MQIQNNVFIVTGGASGLGAATARTIVEAGGKVVLADVQQEAGAALAAELGAGARFVKCDV 239 Query: 84 SSEDDAQAVVRAAQAAGSLRGLVNCAGIAPAEKLVGKNGPHSMALFMKTLNINLVGSFNM 143 +SE D QAVV AA GSLRGLVNCAG+APA K VGK+GPH + F + +NINLVG+FNM Sbjct: 240 TSEADGQAVVAAALELGSLRGLVNCAGVAPAIKTVGKDGPHPLDAFQRAVNINLVGTFNM 299 Query: 144 ARFAADAMARTEAQEEGERGIIIHTASVAAYDGQIGQTAYSASKGAIVAMTLPMARDLSR 203 R AADAM R EA E GERG+II+TASVAA+DGQIGQ AY ASK + MTLPMARDLSR Sbjct: 300 CRLAADAMGREEALEHGERGVIINTASVAAFDGQIGQAAYGASKAGVAGMTLPMARDLSR 359 Query: 204 SGIRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRATEYAQLARTIIENVMLNG 263 SGIRVMTIAPGIFETPM++ MPQEVRDSLG+ VPFPPRLG EYA LA+TIIENVMLNG Sbjct: 360 SGIRVMTIAPGIFETPMLMGMPQEVRDSLGKMVPFPPRLGMPREYAHLAKTIIENVMLNG 419 Query: 264 ETIRLDGAIRMQPK 277 ETIRLDGAIRMQPK Sbjct: 420 ETIRLDGAIRMQPK 433 >ref|YP_725118.1| Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha H16] emb|CAJ91750.1| Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha H16] Length = 252 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 185/252 (73%), Positives = 209/252 (82%) Query: 26 MRIEGNVFIVTGAASGLGAATARMIAAAGGKPVLADLNEEAGSALARELGGVFVRCDVSS 85 M+I+GNVFIVTG ASGLGA TARM+A AG + V+ADLNE AG ALA ELGG FVRCDV+S Sbjct: 1 MQIQGNVFIVTGGASGLGAGTARMLAEAGARVVIADLNESAGQALATELGGQFVRCDVTS 60 Query: 86 EDDAQAVVRAAQAAGSLRGLVNCAGIAPAEKLVGKNGPHSMALFMKTLNINLVGSFNMAR 145 E D QAVV AAQA G L G+VNCAGIA A K VGKNGPH + F KT+ INLVG+FNM R Sbjct: 61 EADGQAVVAAAQALGRLSGIVNCAGIATANKTVGKNGPHPLEAFDKTIRINLVGTFNMIR 120 Query: 146 FAADAMARTEAQEEGERGIIIHTASVAAYDGQIGQTAYSASKGAIVAMTLPMARDLSRSG 205 AA AM + EGERG+II+TASVAA+DGQIGQ AY+ASKG +VAMTL +ARDLSR G Sbjct: 121 LAAAAMVQNTPDSEGERGVIINTASVAAFDGQIGQAAYAASKGGVVAMTLAIARDLSRDG 180 Query: 206 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRATEYAQLARTIIENVMLNGET 265 +R MTIAPGIFETPM+L MPQEV+D+LG+ VPFPPRLGR EYA+LAR+IIEN MLNGE Sbjct: 181 VRCMTIAPGIFETPMLLGMPQEVQDALGRMVPFPPRLGRPAEYAKLARSIIENTMLNGEV 240 Query: 266 IRLDGAIRMQPK 277 IRLDGAIRMQPK Sbjct: 241 IRLDGAIRMQPK 252 >ref|YP_004684474.1| short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator N-1] gb|AEI75993.1| short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator N-1] Length = 252 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 183/252 (72%), Positives = 208/252 (82%) Query: 26 MRIEGNVFIVTGAASGLGAATARMIAAAGGKPVLADLNEEAGSALARELGGVFVRCDVSS 85 M+I+GNVFIVTG ASGLGA TARM++ AG K V+ADLNE G ALA ELGG F+RCDV+S Sbjct: 1 MQIQGNVFIVTGGASGLGAGTARMLSEAGAKVVIADLNEATGQALATELGGQFIRCDVTS 60 Query: 86 EDDAQAVVRAAQAAGSLRGLVNCAGIAPAEKLVGKNGPHSMALFMKTLNINLVGSFNMAR 145 E D QAVV AAQA G L G+VNCAGIA A K VGKNGPH + F KT+ INLVG+FNM R Sbjct: 61 EADGQAVVAAAQALGRLSGIVNCAGIATANKTVGKNGPHPLDAFDKTIRINLVGTFNMIR 120 Query: 146 FAADAMARTEAQEEGERGIIIHTASVAAYDGQIGQTAYSASKGAIVAMTLPMARDLSRSG 205 AA AM + EGERG+II+TASVAA+DGQIGQ AY+ASKG +VAMTL +ARDLSR G Sbjct: 121 LAAAAMVQNTPDSEGERGVIINTASVAAFDGQIGQAAYAASKGGVVAMTLAIARDLSRDG 180 Query: 206 IRVMTIAPGIFETPMMLAMPQEVRDSLGQAVPFPPRLGRATEYAQLARTIIENVMLNGET 265 +R MTIAPGIFETPM+L MPQEV+D+LG+ VPFPPRLGR EYA+LAR+IIEN MLNGE Sbjct: 181 VRCMTIAPGIFETPMLLGMPQEVQDALGKMVPFPPRLGRPAEYAKLARSIIENTMLNGEV 240 Query: 266 IRLDGAIRMQPK 277 IRLDGAIRMQPK Sbjct: 241 IRLDGAIRMQPK 252