BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3606.p         (257 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774602.1| phosphoribosylglycinamide formyltransferase ...   335   3e-90
ref|YP_004751883.1| phosphoribosylglycinamide formyltransferase ...   303   2e-80
ref|YP_001354260.1| phosphoribosylglycinamide formyltransferase ...   294   8e-78
ref|YP_001896773.1| phosphoribosylglycinamide formyltransferase ...   289   3e-76
ref|ZP_03266292.1| phosphoribosylglycinamide formyltransferase [...   287   1e-75

>ref|YP_003774602.1| phosphoribosylglycinamide formyltransferase [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62694.1| phosphoribosylglycinamide formyltransferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 203

 Score =  335 bits (860), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 177/203 (87%), Positives = 189/203 (93%)

Query: 55  MRSIVILISGRGSNMEAIVRAAQAERWPARIAAVISNRADASGLEFAASQGIATAVVANR 114
           MRSIVILISGRGSNMEAIVRAAQAE+WPA+IAAVISNRADASGL FAA +GI TAV+ +R
Sbjct: 1   MRSIVILISGRGSNMEAIVRAAQAEQWPAKIAAVISNRADASGLAFAAQRGIPTAVIPSR 60

Query: 115 DYPTRDQFDAALREQIDVFAPDLVVLAGFMRILTAPFVNHYRGRMLNIHPSLLPSFPGLA 174
           DY TR+QFD+ALR++ID FAPDLVVLAGFMRILTAPFV HY+GRMLNIHPSLLPSFPGLA
Sbjct: 61  DYSTREQFDSALRDKIDTFAPDLVVLAGFMRILTAPFVEHYQGRMLNIHPSLLPSFPGLA 120

Query: 175 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVLEEDSEETLAERVLEQEHVIYPR 234
           THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPV EEDSEE LAERVLEQEHVIYPR
Sbjct: 121 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVQEEDSEEALAERVLEQEHVIYPR 180

Query: 235 AVRWFVQGRLALDGARVRLAAEA 257
           AVRWF+ GRL LDG RVRLA  +
Sbjct: 181 AVRWFIDGRLRLDGHRVRLATAS 203


>ref|YP_004751883.1| phosphoribosylglycinamide formyltransferase [Collimonas fungivorans
           Ter331]
 gb|AEK61060.1| Phosphoribosylglycinamide formyltransferase [Collimonas fungivorans
           Ter331]
          Length = 209

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 154/197 (78%), Positives = 176/197 (89%)

Query: 55  MRSIVILISGRGSNMEAIVRAAQAERWPARIAAVISNRADASGLEFAASQGIATAVVANR 114
           MRSIVILISGRGSNM+AIVRAAQ E+WPARIAA++SNRADA GL+FAA+QGI TAVVAN+
Sbjct: 4   MRSIVILISGRGSNMQAIVRAAQTEQWPARIAAIVSNRADAEGLKFAAAQGIPTAVVANK 63

Query: 115 DYPTRDQFDAALREQIDVFAPDLVVLAGFMRILTAPFVNHYRGRMLNIHPSLLPSFPGLA 174
           DYP R+QFDAALR  ID FAPDLVVLAGFMRILTAPFV HY GRM+NIHPSLLPSF G+A
Sbjct: 64  DYPDREQFDAALRVVIDGFAPDLVVLAGFMRILTAPFVEHYAGRMMNIHPSLLPSFTGMA 123

Query: 175 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVLEEDSEETLAERVLEQEHVIYPR 234
           THRQAL AGVK+HG TVHFVTP LDHGPIVAQ AVPVLE+D+E++L +RVL +EH +YPR
Sbjct: 124 THRQALQAGVKVHGVTVHFVTPALDHGPIVAQVAVPVLEDDTEQSLEQRVLLEEHQLYPR 183

Query: 235 AVRWFVQGRLALDGARV 251
           AVRWF++ RL ++  RV
Sbjct: 184 AVRWFIENRLRIEDGRV 200


>ref|YP_001354260.1| phosphoribosylglycinamide formyltransferase [Janthinobacterium sp.
           Marseille]
 gb|ABR88979.1| phosphoribosylglycinamide formyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 209

 Score =  294 bits (753), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 154/203 (75%), Positives = 175/203 (86%)

Query: 55  MRSIVILISGRGSNMEAIVRAAQAERWPARIAAVISNRADASGLEFAASQGIATAVVANR 114
           MR IVILISGRGSNM AI+RAAQ E WPARIAAVISN+ADASGL +AA  GI+T VVAN+
Sbjct: 1   MRRIVILISGRGSNMRAIIRAAQNEEWPARIAAVISNKADASGLAYAAEHGISTLVVANK 60

Query: 115 DYPTRDQFDAALREQIDVFAPDLVVLAGFMRILTAPFVNHYRGRMLNIHPSLLPSFPGLA 174
           DYP+R+ FDAAL+ +ID F PDLVVLAGFMR+LT PFV HY  RMLNIHPSLLPSF GLA
Sbjct: 61  DYPSREAFDAALQSKIDSFMPDLVVLAGFMRVLTTPFVAHYADRMLNIHPSLLPSFVGLA 120

Query: 175 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVLEEDSEETLAERVLEQEHVIYPR 234
           THRQALAAGVKLHGATVHFVT +LDHGPIVAQAAVPVL +D+EE+LA RVLEQEH+IYPR
Sbjct: 121 THRQALAAGVKLHGATVHFVTAELDHGPIVAQAAVPVLADDTEESLAARVLEQEHIIYPR 180

Query: 235 AVRWFVQGRLALDGARVRLAAEA 257
           A+R F+ GRL++    VR+  +A
Sbjct: 181 AIRCFLDGRLSVHDGVVRIRPDA 203


>ref|YP_001896773.1| phosphoribosylglycinamide formyltransferase [Burkholderia
           phytofirmans PsJN]
 gb|ACD17549.1| phosphoribosylglycinamide formyltransferase [Burkholderia
           phytofirmans PsJN]
          Length = 217

 Score =  289 bits (739), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 151/199 (75%), Positives = 169/199 (84%)

Query: 55  MRSIVILISGRGSNMEAIVRAAQAERWPARIAAVISNRADASGLEFAASQGIATAVVANR 114
           M+ +VILISGRGSNMEAIVRA   E WPAR+AAVI+NR DA+GL FAAS GIATAVV +R
Sbjct: 1   MKKLVILISGRGSNMEAIVRACSNEAWPARVAAVIANRPDAAGLAFAASHGIATAVVDHR 60

Query: 115 DYPTRDQFDAALREQIDVFAPDLVVLAGFMRILTAPFVNHYRGRMLNIHPSLLPSFPGLA 174
            +P RD FDAAL ++ID FAPDLVVLAGFMR+LTA FV+HY GRMLN+HPSLLPSFPGL 
Sbjct: 61  QFPDRDSFDAALAKEIDSFAPDLVVLAGFMRVLTAGFVDHYAGRMLNVHPSLLPSFPGLK 120

Query: 175 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVLEEDSEETLAERVLEQEHVIYPR 234
           TH+QAL AGV+LHGA+VHFVT  LDHGPIVAQAAVPV   D+   LAERVL  EH+IYPR
Sbjct: 121 THQQALDAGVRLHGASVHFVTSQLDHGPIVAQAAVPVETGDTPAMLAERVLATEHIIYPR 180

Query: 235 AVRWFVQGRLALDGARVRL 253
           AVRWFV+GRLALDG RV L
Sbjct: 181 AVRWFVEGRLALDGLRVTL 199


>ref|ZP_03266292.1| phosphoribosylglycinamide formyltransferase [Burkholderia sp. H160]
 gb|EEA02120.1| phosphoribosylglycinamide formyltransferase [Burkholderia sp. H160]
          Length = 217

 Score =  287 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 149/199 (74%), Positives = 169/199 (84%)

Query: 55  MRSIVILISGRGSNMEAIVRAAQAERWPARIAAVISNRADASGLEFAASQGIATAVVANR 114
           M+ +VILISGRGSNMEAIVRA  +E WPA++AAVI+NR DA+GL FAAS GIATAVV +R
Sbjct: 1   MKKLVILISGRGSNMEAIVRACASEGWPAQVAAVIANRPDAAGLAFAASHGIATAVVDHR 60

Query: 115 DYPTRDQFDAALREQIDVFAPDLVVLAGFMRILTAPFVNHYRGRMLNIHPSLLPSFPGLA 174
            +P RD FDAAL EQID FAPDLVVLAGFMR+LTA FV+HY GRMLN+HPSLLPSFPGL 
Sbjct: 61  QFPDRDSFDAALAEQIDAFAPDLVVLAGFMRVLTARFVDHYVGRMLNVHPSLLPSFPGLK 120

Query: 175 THRQALAAGVKLHGATVHFVTPDLDHGPIVAQAAVPVLEEDSEETLAERVLEQEHVIYPR 234
           TH+QAL AGV+ HGA+VHFVT  LDHGPIV Q+AVPV   D+  TLA RVL  EH+IYPR
Sbjct: 121 THQQALDAGVRFHGASVHFVTSKLDHGPIVVQSAVPVEAGDTAATLAARVLATEHIIYPR 180

Query: 235 AVRWFVQGRLALDGARVRL 253
           AVRWFV+GRLALDG+RV L
Sbjct: 181 AVRWFVEGRLALDGSRVTL 199