BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3590.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774044.1| 3-methyl-2-oxobutanoate hydroxymethyltransfe... 295 1e-78 ref|ZP_04577366.1| 3-methyl-2-oxobutanoate hydroxymethyltransfer... 245 2e-63 ref|YP_001100884.1| 3-methyl-2-oxobutanoate hydroxymethyltransfe... 235 2e-60 ref|YP_004754483.1| 3-methyl-2-oxobutanoate hydroxymethyltransfe... 235 2e-60 ref|ZP_04579518.1| 3-methyl-2-oxobutanoate hydroxymethyltransfer... 235 2e-60 >ref|YP_003774044.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ62136.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 275 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 148/154 (96%), Positives = 153/154 (99%) Query: 1 MVKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 60 M+KLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA Sbjct: 122 MIKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 181 Query: 61 VQQAGASLVVIEAVPAALGKEVTDRLAVPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 120 VQQAGASLVVIEAVPA LGKEVTDRL++PTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF Sbjct: 182 VQQAGASLVVIEAVPATLGKEVTDRLSIPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 241 Query: 121 VRNFMEGASGIEDAVRRYVAAVKDGSFPAQEHCF 154 VRNFM+GASGIE+AVRRYVAAVKDGSFPAQEHCF Sbjct: 242 VRNFMDGASGIEEAVRRYVAAVKDGSFPAQEHCF 275 >ref|ZP_04577366.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Oxalobacter formigenes HOxBLS] gb|EEO28328.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Oxalobacter formigenes HOxBLS] Length = 270 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 114/154 (74%), Positives = 132/154 (85%) Query: 1 MVKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 60 MVK+EGG WL DT++FLTER IPVC+H+GLTPQSVHQ GG++VQGKTS+ A ++ DA Sbjct: 117 MVKIEGGRWLEDTVRFLTERAIPVCSHLGLTPQSVHQFGGYRVQGKTSEDAKRILEDAKI 176 Query: 61 VQQAGASLVVIEAVPAALGKEVTDRLAVPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 120 +Q AGASL V+EAVPA LGKE+T+ L VPTIGIGAGPDCSGQVLVMHDML V+PG K+RF Sbjct: 177 LQNAGASLYVLEAVPAILGKEITEALNVPTIGIGAGPDCSGQVLVMHDMLNVYPGRKARF 236 Query: 121 VRNFMEGASGIEDAVRRYVAAVKDGSFPAQEHCF 154 VRNFMEG S IEDA++ YV AVKDGSFPA EHCF Sbjct: 237 VRNFMEGQSSIEDAIKAYVRAVKDGSFPAPEHCF 270 >ref|YP_001100884.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Herminiimonas arsenicoxydans] emb|CAL62763.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase) (KPHMT) [Herminiimonas arsenicoxydans] Length = 276 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 110/154 (71%), Positives = 133/154 (86%) Query: 1 MVKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 60 MVK+EGG W+ DT++FL ER IPVCAH+GLTPQSVH+ GG+KVQGKT++ A QL DALA Sbjct: 123 MVKIEGGAWVLDTVRFLVEREIPVCAHLGLTPQSVHRFGGYKVQGKTAEAAQQLKDDALA 182 Query: 61 VQQAGASLVVIEAVPAALGKEVTDRLAVPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 120 +Q AGASL+++EA+PA+LGKEVTD L +PTIGIGAGPDCSGQVLVMHD +GVFPG K+RF Sbjct: 183 LQAAGASLLILEAIPASLGKEVTDILTMPTIGIGAGPDCSGQVLVMHDFIGVFPGKKARF 242 Query: 121 VRNFMEGASGIEDAVRRYVAAVKDGSFPAQEHCF 154 V+NFMEG + IE AVR Y+ VK+G+FPA EHCF Sbjct: 243 VKNFMEGQTSIEGAVRAYIREVKEGTFPAPEHCF 276 >ref|YP_004754483.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Collimonas fungivorans Ter331] gb|AEK63660.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Collimonas fungivorans Ter331] Length = 278 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 112/154 (72%), Positives = 136/154 (88%) Query: 1 MVKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 60 MVK+EGG WL T++FLTER IPVC H+GLTPQSVHQ+GG+KVQGK+ A QL ADALA Sbjct: 125 MVKIEGGTWLVPTVRFLTERAIPVCGHLGLTPQSVHQMGGYKVQGKSHAAAEQLKADALA 184 Query: 61 VQQAGASLVVIEAVPAALGKEVTDRLAVPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 120 +Q+AGASL+V+EA+PAALGKEV++ L++PTIGIGAGPDCSGQVLVMHD++GVFPGHK+RF Sbjct: 185 LQEAGASLLVLEAIPAALGKEVSELLSIPTIGIGAGPDCSGQVLVMHDLMGVFPGHKARF 244 Query: 121 VRNFMEGASGIEDAVRRYVAAVKDGSFPAQEHCF 154 V++FMEG + I+ AV YV+AVKD SFPA EHCF Sbjct: 245 VKDFMEGQTSIDAAVLAYVSAVKDKSFPAPEHCF 278 >ref|ZP_04579518.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Oxalobacter formigenes OXCC13] gb|EEO30491.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Oxalobacter formigenes OXCC13] Length = 270 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 108/154 (70%), Positives = 131/154 (85%) Query: 1 MVKLEGGVWLADTIKFLTERGIPVCAHIGLTPQSVHQLGGFKVQGKTSDGATQLHADALA 60 MVK+EGG WL DTI+FLTER IPVC H+GLTPQSVHQ GG++VQGKT + A ++ DA Sbjct: 117 MVKIEGGRWLEDTIRFLTERAIPVCGHLGLTPQSVHQFGGYRVQGKTEEDAERIIEDAKI 176 Query: 61 VQQAGASLVVIEAVPAALGKEVTDRLAVPTIGIGAGPDCSGQVLVMHDMLGVFPGHKSRF 120 +Q AGAS+ V+EA+P+ LGK VT+ ++VPTIGIGAGPDCSGQVLVMHDML V+PG K+RF Sbjct: 177 LQDAGASIFVLEAIPSQLGKRVTEAISVPTIGIGAGPDCSGQVLVMHDMLNVYPGKKARF 236 Query: 121 VRNFMEGASGIEDAVRRYVAAVKDGSFPAQEHCF 154 VRNFMEG + IE A++ YVAAVKDG+FPA+EHCF Sbjct: 237 VRNFMEGQTTIEGAIKAYVAAVKDGTFPAEEHCF 270