BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3576.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774615.1| branched-chain amino acid ABC transporter AT... 484 e-135 ref|YP_003773613.1| branched-chain amino acid ABC transporter AT... 483 e-134 ref|YP_004751894.1| high-affinity branched-chain amino acid ABC ... 431 e-119 gb|ABW82967.1| ABC transporter [uncultured bacterium pEAF66] 428 e-118 ref|ZP_08275506.1| Branched-chain amino acid transport ATP-bindi... 425 e-117 >ref|YP_003774615.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62707.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 243/255 (95%), Positives = 250/255 (98%) Query: 1 MTQTLLKIRDVSKRFGGLQAFSGVGITIEQGQIYGLIGPNGAGKTTFFNVITGLYQPDTG 60 M+QTLLKIRDVSKRFGGLQA +GVGITIE+GQIYGLIGPNGAGKTTFFNVITGLYQPDTG Sbjct: 1 MSQTLLKIRDVSKRFGGLQALNGVGITIERGQIYGLIGPNGAGKTTFFNVITGLYQPDTG 60 Query: 61 SFELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRH 120 +FELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRH Sbjct: 61 TFELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRH 120 Query: 121 KAARDEEAAIRAKSQQLLDFVGIGTFSSRTARHLSYGDQRRLEIARALATDPQLLALDEP 180 KAAR+EEAAIR KSQ+LLDFVGIG F+ RTARHLSYGDQRRLEIARALATDPQLLALDEP Sbjct: 121 KAAREEEAAIREKSQKLLDFVGIGQFAKRTARHLSYGDQRRLEIARALATDPQLLALDEP 180 Query: 181 AAGMNATEKLALRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV 240 AAGMNATEKL LRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV Sbjct: 181 AAGMNATEKLGLRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV 240 Query: 241 QKNPAVIEAYLGAGH 255 QKNPAVIEAYLGAGH Sbjct: 241 QKNPAVIEAYLGAGH 255 >ref|YP_003773613.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ61705.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 242/255 (94%), Positives = 250/255 (98%) Query: 1 MTQTLLKIRDVSKRFGGLQAFSGVGITIEQGQIYGLIGPNGAGKTTFFNVITGLYQPDTG 60 M+QTLLKIRDVSKRFGGLQA +GVGITIE+GQIYGLIGPNGAGKTTFFNVITGLYQPDTG Sbjct: 1 MSQTLLKIRDVSKRFGGLQALNGVGITIERGQIYGLIGPNGAGKTTFFNVITGLYQPDTG 60 Query: 61 SFELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRH 120 +FELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRT+QNVFGAVFRH Sbjct: 61 TFELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTRQNVFGAVFRH 120 Query: 121 KAARDEEAAIRAKSQQLLDFVGIGTFSSRTARHLSYGDQRRLEIARALATDPQLLALDEP 180 KAAR+EEAAIR KSQ+LLDFVGIG F+ RTARHLSYGDQRRLEIARALATDPQLLALDEP Sbjct: 121 KAAREEEAAIREKSQKLLDFVGIGQFAKRTARHLSYGDQRRLEIARALATDPQLLALDEP 180 Query: 181 AAGMNATEKLALRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV 240 AAGMNATEKL LRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV Sbjct: 181 AAGMNATEKLGLRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV 240 Query: 241 QKNPAVIEAYLGAGH 255 QKNPAVIEAYLGAGH Sbjct: 241 QKNPAVIEAYLGAGH 255 >ref|YP_004751894.1| high-affinity branched-chain amino acid ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK61071.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) [Collimonas fungivorans Ter331] Length = 256 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 219/251 (87%), Positives = 229/251 (91%) Query: 5 LLKIRDVSKRFGGLQAFSGVGITIEQGQIYGLIGPNGAGKTTFFNVITGLYQPDTGSFEL 64 +L I V+KRFGGLQA S V I I QGQIYGLIGPNGAGKTTFFNVITGLYQ DTGSFEL Sbjct: 6 ILNISGVNKRFGGLQALSEVNIKILQGQIYGLIGPNGAGKTTFFNVITGLYQADTGSFEL 65 Query: 65 DGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRHKAAR 124 GK YSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRT Q VFGAVFRHK AR Sbjct: 66 AGKAYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTHQGVFGAVFRHKKAR 125 Query: 125 DEEAAIRAKSQQLLDFVGIGTFSSRTARHLSYGDQRRLEIARALATDPQLLALDEPAAGM 184 EE AIR +SQ+LLDFVGIG F RTARHLSYGDQRRLEIARALATDPQLLALDEPAAGM Sbjct: 126 LEEIAIRKRSQELLDFVGIGRFGDRTARHLSYGDQRRLEIARALATDPQLLALDEPAAGM 185 Query: 185 NATEKLALRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADVQKNP 244 NATEKLALRELLVKI+ EGKTILLIEHDVKLMMGLC+R+TVLDYGKPIAEG+PA++QKNP Sbjct: 186 NATEKLALRELLVKIKNEGKTILLIEHDVKLMMGLCDRLTVLDYGKPIAEGLPAEIQKNP 245 Query: 245 AVIEAYLGAGH 255 AVIEAYLG GH Sbjct: 246 AVIEAYLGGGH 256 >gb|ABW82967.1| ABC transporter [uncultured bacterium pEAF66] Length = 256 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 214/253 (84%), Positives = 233/253 (92%) Query: 3 QTLLKIRDVSKRFGGLQAFSGVGITIEQGQIYGLIGPNGAGKTTFFNVITGLYQPDTGSF 62 Q +L I V+KRFGGLQA + VGI I +GQIYGLIGPNGAGKTTFFNVITGLYQPDTG+F Sbjct: 4 QIILNIAGVNKRFGGLQALTDVGIKIMKGQIYGLIGPNGAGKTTFFNVITGLYQPDTGTF 63 Query: 63 ELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRHKA 122 EL GKPYSPSAPH+VAKAGIARTFQNIRLFGEMT LENVMVGCHVRT Q VFGAVFRHKA Sbjct: 64 ELAGKPYSPSAPHKVAKAGIARTFQNIRLFGEMTALENVMVGCHVRTHQGVFGAVFRHKA 123 Query: 123 ARDEEAAIRAKSQQLLDFVGIGTFSSRTARHLSYGDQRRLEIARALATDPQLLALDEPAA 182 AR EEAAIRA++Q+LLDFVGIG F+ RT++ LSYGDQRRLEIARALATDPQLLALDEPAA Sbjct: 124 ARMEEAAIRARAQELLDFVGIGAFAKRTSKFLSYGDQRRLEIARALATDPQLLALDEPAA 183 Query: 183 GMNATEKLALRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADVQK 242 GMNATEKLALRELLVKI+ EGKT+LLIEHDVKLMMGLC+RITVL+YGKPIAEG+PA++Q Sbjct: 184 GMNATEKLALRELLVKIKNEGKTVLLIEHDVKLMMGLCDRITVLEYGKPIAEGLPAEIQA 243 Query: 243 NPAVIEAYLGAGH 255 NPAVIEAYLG H Sbjct: 244 NPAVIEAYLGGAH 256 >ref|ZP_08275506.1| Branched-chain amino acid transport ATP-binding protein livG [Oxalobacteraceae bacterium IMCC9480] gb|EGF31027.1| Branched-chain amino acid transport ATP-binding protein livG [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 216/253 (85%), Positives = 230/253 (90%) Query: 3 QTLLKIRDVSKRFGGLQAFSGVGITIEQGQIYGLIGPNGAGKTTFFNVITGLYQPDTGSF 62 Q +L I V+KRFGGLQA SGV + I +GQIYGLIGPNGAGKTTFFNVITGLYQ DTGSF Sbjct: 4 QIILNIAGVTKRFGGLQALSGVNMKITKGQIYGLIGPNGAGKTTFFNVITGLYQADTGSF 63 Query: 63 ELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTKQNVFGAVFRHKA 122 EL GKPYSPSAPHEVAKAGIARTFQNIRLFGEMT +ENVMVG HVRT Q VFGAVFR KA Sbjct: 64 ELAGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTAMENVMVGRHVRTHQGVFGAVFRFKA 123 Query: 123 ARDEEAAIRAKSQQLLDFVGIGTFSSRTARHLSYGDQRRLEIARALATDPQLLALDEPAA 182 AR+EEA IR ++ +LLDFVGI F+ RTARHLSYGDQRRLEIARALATDPQLLALDEPAA Sbjct: 124 AREEEANIRKRALELLDFVGIAKFADRTARHLSYGDQRRLEIARALATDPQLLALDEPAA 183 Query: 183 GMNATEKLALRELLVKIQAEGKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADVQK 242 GMNATEKLALRELLVKI+AEGKTILLIEHDVKL+MGLC+RITVLDYGKPIAEG+PADVQK Sbjct: 184 GMNATEKLALRELLVKIKAEGKTILLIEHDVKLVMGLCDRITVLDYGKPIAEGIPADVQK 243 Query: 243 NPAVIEAYLGAGH 255 NPAVIEAYLG H Sbjct: 244 NPAVIEAYLGGSH 256