BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3564.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspi... 726 0.0 ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspiril... 378 e-102 ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobact... 351 1e-94 ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivo... 347 2e-93 ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter f... 339 6e-91 >ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ61712.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] Length = 513 Score = 726 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 408/513 (79%), Positives = 453/513 (88%), Gaps = 2/513 (0%) Query: 1 MATREELAVIKAARAGESRAQLALGRRYLDGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 MATREELAVIKAARAGESRAQLALGRRYL+GGSGLPRSKGTAFYWLRRAAQQGVDDAWMI Sbjct: 1 MATREELAVIKAARAGESRAQLALGRRYLNGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 Query: 61 IGRNITYDQVKELSSPQEAAIWYEKAFEAGVPQAGVIFARLVLEHTEQFDSNAHARAIAA 120 IGRNITY+QVKELS P+EAA+WYEKAFEAGVPQAG+IFARLVL++T +FDSN HARAIAA Sbjct: 61 IGRNITYEQVKELSPPREAAVWYEKAFEAGVPQAGLIFARLVLDNTSEFDSNTHARAIAA 120 Query: 121 LSLLASRDDHEAQWLLAQQMQRHGQPMVPGLPAS--AVEERLVREAARAGIEQAQYALLD 178 LSLLASRDDHEAQWLLAQQMQRHGQPM+PG A+ A E++L+ EAARAGIE+AQYA+LD Sbjct: 121 LSLLASRDDHEAQWLLAQQMQRHGQPMLPGAAAASPAYEDKLMLEAARAGIEEAQYAVLD 180 Query: 179 KAWQQGQGAAFARGAAVLVKRLIERNSQAVAQLDKEGDATGLVQLNAEEATLLLRYGQWQ 238 KAWQQG A+FARGA + +RL+ R++ AVAQL+K+G G VQL+ EEATLLLRYGQW+ Sbjct: 181 KAWQQGDEASFARGAQRVTQRLLARHANAVAQLEKDGQIHGAVQLSDEEATLLLRYGQWR 240 Query: 239 ARAAAPELPQLMRLFELAALAGEVEARLELGLLCAKIDRAGNRVFMEQGLANFKKALHWL 298 R A+P+ +L LFELAA+ G +A LELGLLCAKIDR G R+FME GLANFKKALHWL Sbjct: 241 LRGASPDPDELQILFELAAMGGNAQACLELGLLCAKIDRQGERIFMEHGLANFKKALHWL 300 Query: 299 VLAGEGGTAQAWHALARIYSRSIYSQRNLQVAQQYLEKAAESGLVEAQSELAQIFWRNRR 358 AGE G AQ WHALARIYSRSIYSQRNLQVAQ YLEKAA++GLVEAQ ELAQ+ WR+RR Sbjct: 301 ERAGEAGVAQGWHALARIYSRSIYSQRNLQVAQHYLEKAAQAGLVEAQCELAQVCWRHRR 360 Query: 359 DDPMHDVKALYWWQQAAAQGEASAADALQPFMAVEDAQSWAVQARAQLSDKLRNSNPFLS 418 DDP++DVKALYWWQQAAAQGE +A AL F A DAQ WA+QA+A L+DKLRNS+PFLS Sbjct: 361 DDPLNDVKALYWWQQAAAQGEPTAQAALDAFAAQPDAQGWALQAQALLTDKLRNSSPFLS 420 Query: 419 ARIELAAIFGLTKPEALLIDIKQADYGHCLVVDICAHHARSKRRLIAVQTEAQRAAINRV 478 ARIELAA FGLTKPEALLIDIK ADYGHCLVVDICAHHARSKRRLIAVQT+AQRA +NRV Sbjct: 421 ARIELAATFGLTKPEALLIDIKAADYGHCLVVDICAHHARSKRRLIAVQTDAQRATLNRV 480 Query: 479 SRLFGDVDCGFSGPEGNYRQRQYRLRTAFPDIA 511 SRLFGDVDCGF G EGNYRQRQYRLRT FP + Sbjct: 481 SRLFGDVDCGFDGLEGNYRQRQYRLRTTFPGLG 513 >ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspirillum seropedicae SmR1] gb|ADJ65763.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 532 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 264/517 (51%), Positives = 340/517 (65%), Gaps = 10/517 (1%) Query: 1 MATREELAVIKAARAGESRAQLALGRRYLDGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 MA RE+LA+I+AARAG++ AQL LG+RYL GG+GLP+S TAF+WL RAA+Q + DAWM+ Sbjct: 1 MANREDLAIIRAARAGQAAAQLTLGKRYLFGGNGLPQSLSTAFHWLERAARQELADAWML 60 Query: 61 IGRNITYDQVKELSSPQEAAIWYEKAFEAGVPQAGVIFARLVLEHTEQFDSNAHARAIAA 120 I +I Y+ V L+ PQEAA WYE+AFE G+ +AG+ FARLVLE + + ARAI Sbjct: 61 IAEHIPYEVVVTLTRPQEAAQWYERAFEGGMTKAGLAFARLVLESAGEPGAELKARAIRV 120 Query: 121 LSLLASRDDHEAQWLLAQQMQRHGQPMVPGLPASAVE---------ERLVREAARAGIEQ 171 L ++A D +AQWLLA+Q + +P A+ ++ ++AA AGIEQ Sbjct: 121 LQVVAREGDPDAQWLLARQGSQPAEPAASAAVAAPAPAPDLPPEDLQQWTQKAADAGIEQ 180 Query: 172 AQYALLDKAWQQGQGAAFARGAAVLVKRLIERNSQAVAQLDKEGDATGLVQLNAEEATLL 231 AQ+AL D AWQQ F + A L +L+ + VAQL+ +A L + LL Sbjct: 181 AQHALADAAWQQADLIQFRQRAQPLADKLLRQYEALVAQLNGPAEALA-TALGPQNIVLL 239 Query: 232 LRYGQWQARAAAPELPQLMRLFELAALAGEVEARLELGLLCAKIDRAGNRVFMEQGLANF 291 R Q +L Q +L ELAALA + +A+L LGLL ++D G R F G AN+ Sbjct: 240 RRLAQVHLGEKRADLQQAQQLLELAALACDRDAQLALGLLYGRVDEQGVRCFPGLGSANY 299 Query: 292 KKALHWLVLAGEGGTAQAWHALARIYSRSIYSQRNLQVAQQYLEKAAESGLVEAQSELAQ 351 KKA+ WL LAGE G A AW+ L+RIY + +SQRNL Q YLE+AAE G V AQ E Sbjct: 300 KKAIRWLTLAGEQGMAAAWYVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVAAQLECGI 359 Query: 352 IFWRNRRDDPMHDVKALYWWQQAAAQGEASAADALQPFMAVEDAQSWAVQARAQLSDKLR 411 WRNRRD+ +DV+ALYW Q+AA+QG+ A L A +WAV ARAQL+ + Sbjct: 360 GAWRNRRDEAGNDVRALYWLQKAASQGDEQAQALLDKVADRPQAAAWAVLARAQLTREQV 419 Query: 412 NSNPFLSARIELAAIFGLTKPEALLIDIKQADYGHCLVVDICAHHARSKRRLIAVQTEAQ 471 N++PFL+ARIELA +FGLT+PEALLID+KQAD GHCL+VDI + +ARSKRRLI V+ Q Sbjct: 420 NAHPFLAARIELATLFGLTRPEALLIDLKQADRGHCLMVDIRSQYARSKRRLIMVENGEQ 479 Query: 472 RAAINRVSRLFGDVDCGFSGPEGNYRQRQYRLRTAFP 508 R A+NR+ RLF DVDCG SGPEGNYRQR YRL+T P Sbjct: 480 RGALNRIGRLFEDVDCGPSGPEGNYRQRLYRLKTVLP 516 >ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32676.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] Length = 522 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 228/529 (43%), Positives = 311/529 (58%), Gaps = 27/529 (5%) Query: 1 MATREELAVIKAARAGESRAQLALGRRYLDGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 MA REEL VI+AARAG++ AQLALG+RYL GG+GLP+S TA YWL RAA Q D+AW++ Sbjct: 1 MANREELLVIRAARAGQAPAQLALGKRYLFGGAGLPKSIATALYWLDRAAHQQQDEAWLL 60 Query: 61 IGRNITYDQVKELSSPQEAAIWYEKAFEAGVPQAGVIFARLVLEHTEQFDSNAHAR-AIA 119 IG +I ++ + P +WYE+AF++GV QAG++ A+LVL + S+ R A Sbjct: 61 IGSHIPFEAASRSAQPASLCVWYERAFDSGVLQAGLVLAKLVLAQSGDCTSDILRRKAWM 120 Query: 120 ALSLLASRDDHEAQWLLAQ--------------QMQRHG-QPMVPGLPASAVEERLVRE- 163 AL +A EAQWL+AQ + H + +PA ++ V E Sbjct: 121 ALEAVAHAGFGEAQWLMAQLIGHANGCDGTDLRALSSHSFHSTILKMPACDTAKKSVLEW 180 Query: 164 ---AARAGIEQAQYALLDKAWQQGQGAAFARGAAVLVKRLIERNSQAVAQLDKEGDATGL 220 AA G+ +AQ+AL + AWQ G F + A L + QAVA+ L Sbjct: 181 TVLAAGGGVTRAQHALAEHAWQAGNHDDFLQWALPLAR-------QAVARRQSRPMTDAL 233 Query: 221 VQLNAEEATLLLRYGQWQARAAAPELPQLMRLFELAALAGEVEARLELGLLCAKIDRAGN 280 + ++ +LL R + + +L R E+AA G+ ++ L LGL ++D G Sbjct: 234 EEPVIDDTSLLARCSEVLMARGNVDAAELERFLEVAASGGDRQSCLALGLWFGRMDGNGT 293 Query: 281 RVFMEQGLANFKKALHWLVLAGEGGTAQAWHALARIYSRSIYSQRNLQVAQQYLEKAAES 340 R+ +GLAN+KKAL WLV AGE G A+AW A +RIY + +SQRNL + Y++KAAE+ Sbjct: 294 RLTEVRGLANYKKALRWLVAAGEQGLAEAWFATSRIYLKPEFSQRNLLDSYYYVQKAAEA 353 Query: 341 GLVEAQSELAQIFWRNRRDDPMHDVKALYWWQQAAAQGEASAADALQPFMAVEDAQSWAV 400 G AQ EL WR+RR+D DV+A +W Q+AAAQG A L+ WA Sbjct: 354 GHTVAQLELGIAAWRSRRNDQSKDVEAAFWLQKAAAQGNQEAQQLLRKIADGAVPALWAE 413 Query: 401 QARAQLSDKLRNSNPFLSARIELAAIFGLTKPEALLIDIKQADYGHCLVVDICAHHARSK 460 AR +L + PFL AR+ELAA+FGL++ EALL+++ AD GHCL++DI H RSK Sbjct: 414 SAREKLVHDRNRTAPFLVARLELAAVFGLSRAEALLLNVNAADCGHCLLIDIRDVHPRSK 473 Query: 461 RRLIAVQTEAQRAAINRVSRLFGDVDCGFSGPEGNYRQRQYRLRTAFPD 509 RRLI +Q+ QR A++R+ RLF DVDC GPEGNYRQR YRLR P+ Sbjct: 474 RRLILIQSNEQRQALSRIVRLFDDVDCSIKGPEGNYRQRLYRLRMLVPE 522 >ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] gb|AAT42413.1| hypothetical protein [Collimonas fungivorans Ter331] gb|AEK63856.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] Length = 536 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 242/532 (45%), Positives = 324/532 (60%), Gaps = 24/532 (4%) Query: 1 MATREELAVIKAARAGESRAQLALGRRYLDGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 MA RE+LA+I+AARAG++ AQLALG+RYL GG+GLP+S TA +WL RAAQQ +AWM+ Sbjct: 1 MAKREDLAIIRAARAGQAAAQLALGKRYLFGGNGLPQSLSTALHWLDRAAQQQESEAWML 60 Query: 61 IGRNITYDQVKELSSPQEAAIWYEKAFEAGVPQAGVIFARLVLEH---TEQFDSNAHARA 117 IG +I + + S P +WYE+AF+AG+ QAG++ A+LVL Q H + Sbjct: 61 IGSHIPLEVAEAASDPLALCVWYERAFDAGLMQAGLVLAQLVLNREGGNPQVLPGLHGKV 120 Query: 118 IAALSLLASRDDHEAQWLLAQQ------------------MQRHGQPMVPGLPASAVEER 159 I AL A EAQWLLAQ +Q QP P + Sbjct: 121 IKALETAAHAGIAEAQWLLAQHADSAPLPGRAAPSEKLAGVQSETQP--ESKPEQDATLK 178 Query: 160 LVREAARAGIEQAQYALLDKAWQQGQGAAFARGAAVLVKRLIERNSQAVAQLDKEGDATG 219 AA AG+ QAQ +L AW++ F A L + L E+ + +AQL+ + T Sbjct: 179 WTARAADAGVMQAQQSLAQLAWEKADWPVFLERALPLARALSEQYADILAQLNVPSE-TL 237 Query: 220 LVQLNAEEATLLLRYGQWQARAAAPELPQLMRLFELAALAGEVEARLELGLLCAKIDRAG 279 QL E +LLLR Q + + ++ + ELAA + A+L LGL A+++ G Sbjct: 238 ARQLGEENLSLLLRSAQVLQTSDGFDAAEVQQFLELAAYGDDKAAQLALGLWYARMNSDG 297 Query: 280 NRVFMEQGLANFKKALHWLVLAGEGGTAQAWHALARIYSRSIYSQRNLQVAQQYLEKAAE 339 R+ + G AN+KKA+ WL LAGE G A AW+AL+RIY +S +SQRNL Q++LE AAE Sbjct: 298 ERLLVGTGSANYKKAIRWLTLAGEAGLADAWYALSRIYLKSEFSQRNLVDMQRHLEHAAE 357 Query: 340 SGLVEAQSELAQIFWRNRRDDPMHDVKALYWWQQAAAQGEASAADALQPFMAVEDAQSWA 399 G AQ E WRNRR+ +DV+A+YW Q+AAAQG AA+ L +WA Sbjct: 358 MGHRAAQLECGLSAWRNRREKLANDVRAVYWLQKAAAQGSGEAANLLARIADSAQPAAWA 417 Query: 400 VQARAQLSDKLRNSNPFLSARIELAAIFGLTKPEALLIDIKQADYGHCLVVDICAHHARS 459 A+ QL+ + ++PFL+ARIELA +FGL++PEALL+D+ QAD GHCLV+DI AH+ARS Sbjct: 418 EAAKQQLTREQVKAHPFLAARIELAVLFGLSRPEALLLDLNQADCGHCLVIDIRAHYARS 477 Query: 460 KRRLIAVQTEAQRAAINRVSRLFGDVDCGFSGPEGNYRQRQYRLRTAFPDIA 511 KRRLI +QT +R A+ R++RLF DVDCG +GPEGNYRQR YR +TA P A Sbjct: 478 KRRLILIQTGDERQALTRIARLFEDVDCGPNGPEGNYRQRLYRFKTAVPSSA 529 >ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28563.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 536 Score = 339 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 216/514 (42%), Positives = 295/514 (57%), Gaps = 22/514 (4%) Query: 1 MATREELAVIKAARAGESRAQLALGRRYLDGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 MA+REEL +++ AR G++ +Q ALG YL G LP+S TA +WL RAA+QG A + Sbjct: 24 MASREELQLLRKARTGDTASQFALGELYLFGSKSLPQSLTTALHWLGRAARQGDAAAKRL 83 Query: 61 IGRNITYDQVKELSSPQEAAIWYEKAFEAGVPQAGVIFARLVLEHTEQFDSNAHARAIAA 120 IG +I Y+ Q WY A + G +AG++ A+L+L DS + AIA Sbjct: 84 IGNHIPYEVANLHPDRQLLERWYRDALDEGCYRAGLVLAKLLLSSGTATDSKKRSEAIAI 143 Query: 121 LSLLASRDDHEAQWLLAQQMQRHGQPMVPGLPASAVEERLVREAARAGIEQAQYALLDKA 180 L + D EAQWLLA+ ++ + P + AA AGI AQ AL++ A Sbjct: 144 LEKIVDHDIPEAQWLLAELVKNSNRYS----PLKGSALKWTACAANAGIVDAQIALIEHA 199 Query: 181 WQQGQGAAFARGAAVLVKRLIERNSQAVAQLDKEGDATGLVQLNAEEATLLLRYGQW--- 237 W+ F + A + + L++ +Q A D +G + A LLLR GQ Sbjct: 200 WKNADYETFLQHALPIARSLLQSGAQPEAA-DTDGHS----------ARLLLRCGQLLFK 248 Query: 238 -QARAAAPELPQLMRLFELAALAGEVEARLELGLLCAKIDRAGNRVFMEQGLANFKKALH 296 Q +AA E+ ++E+AA EA LGL A++D G R G +FKKA+H Sbjct: 249 EQGDSAAEEI---QSMWEMAARYKNAEAAFLLGLWHARMDENGKRTLFGAGPTSFKKAIH 305 Query: 297 WLVLAGEGGTAQAWHALARIYSRSIYSQRNLQVAQQYLEKAAESGLVEAQSELAQIFWRN 356 WL AG G +AW+AL+ IY ++ +SQRNL AQ+YLE AA G AQ E WRN Sbjct: 306 WLTQAGGQGLPKAWYALSLIYQKAEFSQRNLSAAQRYLETAANLGHPRAQYERGLHAWRN 365 Query: 357 RRDDPMHDVKALYWWQQAAAQGEASAADALQPFMAVEDAQSWAVQARAQLSDKLRNSNPF 416 RRD+ +DV+A+YW Q+A G+ AA L WAV+A L+ + +S+PF Sbjct: 366 RRDNESNDVQAVYWLQKATGNGQTEAATLLDRIAVKAQPALWAVKALQHLTRETVSSHPF 425 Query: 417 LSARIELAAIFGLTKPEALLIDIKQADYGHCLVVDICAHHARSKRRLIAVQTEAQRAAIN 476 L+AR+ELAA+FGL++PEALL+DI AD GHCL+VDI + RSKRRLI +QT +R ++ Sbjct: 426 LAARLELAAVFGLSRPEALLLDIHSADKGHCLLVDIREFYRRSKRRLILIQTGKERQTVS 485 Query: 477 RVSRLFGDVDCGFSGPEGNYRQRQYRLRTAFPDI 510 R+ RLF VDCG GPEGNYRQRQYRL+T P + Sbjct: 486 RIGRLFEKVDCGLKGPEGNYRQRQYRLKTLLPPV 519