BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3563.p (151 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773622.1| general secretion pathway protein [Herbaspir... 236 1e-60 ref|NP_903481.1| general secretion pathway protein G [Chromobact... 114 4e-24 ref|YP_003751065.1| general secretory pathway protein G, type II... 112 1e-23 emb|CCA85464.1| General Secretory Pathway protein G, type II sec... 112 2e-23 ref|ZP_08141582.1| general secretion pathway protein G [Pseudomo... 110 5e-23 >ref|YP_003773622.1| general secretion pathway protein [Herbaspirillum seropedicae SmR1] gb|ADJ61714.1| general secretion pathway protein [Herbaspirillum seropedicae SmR1] Length = 183 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 123/155 (79%), Positives = 133/155 (85%), Gaps = 4/155 (2%) Query: 1 MRRSL----RHPAFLFLQRGLARLRWILALTVLAVAAALLLPPLVTRFNHDHSPQALAAE 56 MRRSL RHPAFLFLQRGLARLRWIL LTVLAV AALL+PPLVTRFNHDHSPQA AAE Sbjct: 29 MRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAE 88 Query: 57 KDMQAIAAGLERYRQDNGRYPSAAQGLLALVIKPTRAPVPGNWSIGGYVDRLPRDPWGNS 116 KDM+AIAAGLERYRQDNGRYPS QGLLALVI+P R P+ W +GGYV+RLPRDPWGN Sbjct: 89 KDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNP 148 Query: 117 YQYGADDDGTSYELYSFGQAGPDGGADGEQVIRQH 151 YQY ADDDG SYEL+SFGQAGP+GG D ++VI H Sbjct: 149 YQYQADDDGASYELFSFGQAGPEGGDDDDRVISLH 183 >ref|NP_903481.1| general secretion pathway protein G [Chromobacterium violaceum ATCC 12472] gb|AAQ61473.1| general secretion pathway protein G [Chromobacterium violaceum ATCC 12472] Length = 147 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 3/128 (2%) Query: 14 QRGLARLRWILALTVLAVAAALLLPPLVTRFNHDHSPQALAAEKDMQAIAAGLERYRQDN 73 QRG + ++ + +L V AAL++P +++R + + +AA++D+ AI+ L+ YR DN Sbjct: 9 QRGFTLIEIMVVIVILGVLAALVVPKVMSRPDE---ARIVAAKQDIGAISQALKLYRLDN 65 Query: 74 GRYPSAAQGLLALVIKPTRAPVPGNWSIGGYVDRLPRDPWGNSYQYGADDDGTSYELYSF 133 GRYPS QGL ALV KPT AP P NW GGY++RLP+DPWGN+YQY +++SF Sbjct: 66 GRYPSTDQGLSALVQKPTAAPEPKNWKPGGYLERLPKDPWGNAYQYANPGTHGEIDIWSF 125 Query: 134 GQAGPDGG 141 G G GG Sbjct: 126 GADGEPGG 133 >ref|YP_003751065.1| general secretory pathway protein G, type II secretion system [Ralstonia solanacearum PSI07] emb|CBJ49754.1| General Secretory Pathway protein G, type II secretion system [Ralstonia solanacearum PSI07] emb|CCA80163.1| General Secretory Pathway protein G, type II secretion system [blood disease bacterium R229] Length = 156 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 4/142 (2%) Query: 1 MRRSLRHPAFLF-LQRGLARLRWILALTVLAVAAALLLPPLVTRFNHDHSPQALAAEKDM 59 +R S+R AF + RG + ++ + +L + AAL++P +++R + + +AA++D+ Sbjct: 6 LRTSVRQRAFARRVARGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAAKQDI 62 Query: 60 QAIAAGLERYRQDNGRYPSAAQGLLALVIKPTRAPVPGNWSIGGYVDRLPRDPWGNSYQY 119 +I+ L+ YR DNGRYP+ QGL ALV KPT PVP NW GGY++RLP+DPWG+ YQY Sbjct: 63 ASISQALKLYRLDNGRYPTTEQGLAALVTKPTTEPVPNNWKGGGYLERLPKDPWGHPYQY 122 Query: 120 GADDDGTSYELYSFGQAGPDGG 141 +++SFG G GG Sbjct: 123 LNPGVRGEVDIFSFGADGQPGG 144 >emb|CCA85464.1| General Secretory Pathway protein G, type II secretion system [Ralstonia syzygii R24] Length = 156 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 4/142 (2%) Query: 1 MRRSLRHPAFLF-LQRGLARLRWILALTVLAVAAALLLPPLVTRFNHDHSPQALAAEKDM 59 +R S+R AF + RG + ++ + +L + AAL++P +++R + + +AA++D+ Sbjct: 6 LRTSVRQRAFARRVARGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAAKQDI 62 Query: 60 QAIAAGLERYRQDNGRYPSAAQGLLALVIKPTRAPVPGNWSIGGYVDRLPRDPWGNSYQY 119 +I+ L+ YR DNGRYP+ QGL ALV KPT P+P NW GGY++RLP+DPWG+ YQY Sbjct: 63 ASISQALKLYRLDNGRYPTTEQGLAALVTKPTTEPIPNNWKGGGYLERLPKDPWGHPYQY 122 Query: 120 GADDDGTSYELYSFGQAGPDGG 141 +++SFG G GG Sbjct: 123 LNPGVRGEVDIFSFGADGQPGG 144 >ref|ZP_08141582.1| general secretion pathway protein G [Pseudomonas sp. TJI-51] gb|EGB97136.1| general secretion pathway protein G [Pseudomonas sp. TJI-51] Length = 148 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 85/141 (60%), Gaps = 10/141 (7%) Query: 3 RSLRHPAFLFLQRGLARLRWILALTVLAVAAALLLPPLVTRFNHDHSPQALAAEKDMQAI 62 R+ RH QRG + ++ + +L V AL+LP +++R +H + AA D+Q+I Sbjct: 4 RATRHA-----QRGFTLIEIMVVVIILGVLGALVLPNVMSRPDH---AKLTAARTDLQSI 55 Query: 63 AAGLERYRQDNGRYPSAAQGLLALVIKPTRAPVPGNWSIGGYVDRLPRDPWGNSYQY--G 120 A LE YR DNGRYP++AQGL ALV +P+ AP+P NWS GY+ R P DPWG+ YQY Sbjct: 56 ATALEIYRLDNGRYPTSAQGLDALVTRPSVAPLPRNWSAQGYLKRTPTDPWGSPYQYVNP 115 Query: 121 ADDDGTSYELYSFGQAGPDGG 141 Y+LYS G G GG Sbjct: 116 GSRSNQGYDLYSLGADGQPGG 136