BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3562.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773623.1| iron transport frataxin protein [Herbaspiril...   211   4e-53
ref|YP_001355060.1| frataxin-like protein [Janthinobacterium sp....   157   5e-37
ref|YP_004751106.1| frataxin-like protein [Collimonas fungivoran...   149   1e-34
ref|YP_001101357.1| frataxin-like protein [Herminiimonas arsenic...   149   2e-34
ref|ZP_08274529.1| Frataxin CyaY-like protein, facilitates iron ...   141   4e-32

>ref|YP_003773623.1| iron transport frataxin protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ61715.1| iron transport frataxin protein [Herbaspirillum seropedicae SmR1]
          Length = 110

 Score =  211 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 107/110 (97%), Positives = 109/110 (99%)

Query: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60
           MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM
Sbjct: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60

Query: 61  QEMWLAARSGGFHYKFDGSHWLNTRDGTELYATLSEVVSSQAGVPVTIKP 110
           QEMWLAARSGGFHYK+DG HWLNTRDGTELYATLSEVVSSQAGVPVTI+P
Sbjct: 61  QEMWLAARSGGFHYKYDGQHWLNTRDGTELYATLSEVVSSQAGVPVTIRP 110


>ref|YP_001355060.1| frataxin-like protein [Janthinobacterium sp. Marseille]
 sp|A6T3G3|CYAY_JANMA RecName: Full=Protein CyaY
 gb|ABR90283.1| CyaY protein [Janthinobacterium sp. Marseille]
          Length = 112

 Score =  157 bits (397), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/109 (69%), Positives = 93/109 (85%)

Query: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60
           MTESEFL  A+ATL+ IE +LED  D SDLDVEC+RSGNVLEIE +DNGSKII+NSQAPM
Sbjct: 1   MTESEFLKQAEATLDQIEASLEDLADTSDLDVECTRSGNVLEIEFIDNGSKIIVNSQAPM 60

Query: 61  QEMWLAARSGGFHYKFDGSHWLNTRDGTELYATLSEVVSSQAGVPVTIK 109
           QE+W+AA+SGGFH+K  G+ W+NTRDG EL+A LSE+VS Q G+PV ++
Sbjct: 61  QELWVAAKSGGFHFKATGTQWINTRDGAELFAALSEMVSKQGGIPVVLQ 109


>ref|YP_004751106.1| frataxin-like protein [Collimonas fungivorans Ter331]
 gb|AEK60283.1| Frataxin-like protein [Collimonas fungivorans Ter331]
          Length = 112

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/108 (68%), Positives = 88/108 (81%)

Query: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60
           MTESEFL  A+A L  IETALE A D +DLDVECSRSGNVLEIE VDNGSKII+NSQAPM
Sbjct: 5   MTESEFLAAAEAALGKIETALEQAADHTDLDVECSRSGNVLEIEFVDNGSKIIVNSQAPM 64

Query: 61  QEMWLAARSGGFHYKFDGSHWLNTRDGTELYATLSEVVSSQAGVPVTI 108
           QE+W+AA+SGGFHY+     WLNTRDG+E +  LS ++S+Q GVP+ +
Sbjct: 65  QELWIAAKSGGFHYRQKDGSWLNTRDGSEFFTALSGMISAQGGVPIVL 112


>ref|YP_001101357.1| frataxin-like protein [Herminiimonas arsenicoxydans]
 sp|A4G9P9|CYAY_HERAR RecName: Full=Protein CyaY
 emb|CAL63236.1| Frataxin-like [Herminiimonas arsenicoxydans]
          Length = 112

 Score =  149 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/109 (66%), Positives = 90/109 (82%)

Query: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60
           MTESEFL  A+ATL+ IE  LE+  + SDLDVEC+RSGNVLEIE +DNG+KII+NSQAPM
Sbjct: 1   MTESEFLKQAEATLDQIEATLEELANTSDLDVECTRSGNVLEIEFIDNGTKIIVNSQAPM 60

Query: 61  QEMWLAARSGGFHYKFDGSHWLNTRDGTELYATLSEVVSSQAGVPVTIK 109
           QE+W+AA+SGGFH+K  G  W+NTRD TEL+A LS++VS Q GV V ++
Sbjct: 61  QELWVAAKSGGFHFKAQGEQWMNTRDATELFAALSQMVSQQGGVEVVLR 109


>ref|ZP_08274529.1| Frataxin CyaY-like protein, facilitates iron supply for heme A
           synthesis or Fe-S cluster assembly [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31990.1| Frataxin CyaY-like protein, facilitates iron supply for heme A
           synthesis or Fe-S cluster assembly [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 113

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 70/108 (64%), Positives = 84/108 (77%)

Query: 1   MTESEFLDLADATLNAIETALEDACDASDLDVECSRSGNVLEIECVDNGSKIIINSQAPM 60
           MTES+FL LADA L+ IE ALE       +DVECSRSGNVLEIE VD GSKII+NSQAPM
Sbjct: 1   MTESDFLTLADAVLSGIELALERPDIVDAVDVECSRSGNVLEIEFVDTGSKIIVNSQAPM 60

Query: 61  QEMWLAARSGGFHYKFDGSHWLNTRDGTELYATLSEVVSSQAGVPVTI 108
           +EMW+AA+SGGFHYK+DG  W NTRD +ELY  LS ++S Q G  +++
Sbjct: 61  REMWVAAKSGGFHYKYDGQQWRNTRDDSELYTALSSMISQQGGAEISL 108