BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3558.p (471 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773627.1| Na+/proline symporter protein [Herbaspirillu... 764 0.0 ref|ZP_08274325.1| putative sodium/solute symporter transmembran... 578 e-163 ref|ZP_04577800.1| Na+/solute symporter [Oxalobacter formigenes ... 553 e-155 ref|YP_002980331.1| Na+/solute symporter [Ralstonia pickettii 12... 545 e-153 ref|ZP_04579950.1| Na+/solute symporter [Oxalobacter formigenes ... 545 e-153 >ref|YP_003773627.1| Na+/proline symporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ61719.1| Na+/proline symporter protein [Herbaspirillum seropedicae SmR1] Length = 485 Score = 764 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 440/484 (90%), Positives = 451/484 (93%), Gaps = 27/484 (5%) Query: 14 MNALLWFVVLYWVISVGIGLYATRYVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLG 73 MNALLWFVVLYWVISVGIGLYATR+VKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLG Sbjct: 1 MNALLWFVVLYWVISVGIGLYATRFVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLG 60 Query: 74 VSSTFLKDGLGGIVADPFGSSLCLILVGVFFAKKLYRMNLLTIGDYYKKRFGRAAEMLVT 133 VSSTFLK+GLGGIVADPFGSSLCLILVG+FFAK+LYRMNLLTIGDYYKKRFGRAAEMLVT Sbjct: 61 VSSTFLKEGLGGIVADPFGSSLCLILVGLFFAKRLYRMNLLTIGDYYKKRFGRAAEMLVT 120 Query: 134 ICIVISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDF 193 ICIVISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDF Sbjct: 121 ICIVISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDF 180 Query: 194 LQMIIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMML 253 LQMIIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMML Sbjct: 181 LQMIIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMML 240 Query: 254 GSIPQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPAMVSRLLET 313 GSIPQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDP MVSRLLET Sbjct: 241 GSIPQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPEMVSRLLET 300 Query: 314 DSQLVLPTLIMEKMPVFAQVMFFGALLSAIKSCASATLLAPSVTFTENVLREIRPWKSDR 373 DSQLVLPTLIMEKMPVFAQVMFFGALLSAI+SCASATLLAPSVTFTENVL+EIRPWKSDR Sbjct: 301 DSQLVLPTLIMEKMPVFAQVMFFGALLSAIRSCASATLLAPSVTFTENVLKEIRPWKSDR 360 Query: 374 EFLFSMRAVVLVFTVGVTT---------------------------LAFGVYWQRATRQG 406 EFLFSMRAVVLVFT+GVT+ LAFGVYW RA+RQG Sbjct: 361 EFLFSMRAVVLVFTIGVTSLALNSQSSIYEMVENAYKVTLVAAFVPLAFGVYWPRASRQG 420 Query: 407 ALMAMVLGLVSWITLEYAAPDGLWPPQLAGLLFSIGGMVVGSLMPQVLAPVPPMVAVPAE 466 ALMAMVLGLVSWITLEY APDG WPPQLAGLLFSIGGMVVGSLMPQVLAP+PPM+ PAE Sbjct: 421 ALMAMVLGLVSWITLEYVAPDGFWPPQLAGLLFSIGGMVVGSLMPQVLAPMPPMMPTPAE 480 Query: 467 GSAQ 470 GSAQ Sbjct: 481 GSAQ 484 >ref|ZP_08274325.1| putative sodium/solute symporter transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32186.1| putative sodium/solute symporter transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 465 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 319/456 (69%), Positives = 380/456 (83%), Gaps = 27/456 (5%) Query: 26 VISVGIGLYATRYVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLGVSSTFLKDGLGG 85 +ISVGIGLYA R+VK+SKDYA+AGRSLPMSVVTATVFATWFGSEAVLG+SSTF+K+GL G Sbjct: 1 MISVGIGLYAARFVKNSKDYALAGRSLPMSVVTATVFATWFGSEAVLGISSTFVKEGLRG 60 Query: 86 IVADPFGSSLCLILVGVFFAKKLYRMNLLTIGDYYKKRFGRAAEMLVTICIVISYLGWVA 145 ++ADPFGSS+CLILVG+FFA+ LYRMNLLTIGD+Y+ +FGRA E++VTICIVISYLGWVA Sbjct: 61 VIADPFGSSMCLILVGLFFARPLYRMNLLTIGDFYRNKFGRAVEVMVTICIVISYLGWVA 120 Query: 146 AQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDFLQMIIVVVGMLY 205 AQIKALGLVFNVVSGG I M GM+IGA SVL+YTLMGGMWAVA+TDFLQMII+V+GMLY Sbjct: 121 AQIKALGLVFNVVSGGAISMDAGMMIGAASVLVYTLMGGMWAVAVTDFLQMIIIVLGMLY 180 Query: 206 IGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMMLGSIPQQDVFQRV 265 IG+EVS M GG VV+AHAA AGKF+FWPA ++VLWF AAWITMMLGSIPQQDVFQRV Sbjct: 181 IGWEVSAMAGGASVVVAHAANAGKFDFWPAPTSREVLWFGAAWITMMLGSIPQQDVFQRV 240 Query: 266 MSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPAMVSRLLETDSQLVLPTLIME 325 +SKNE +A AS+LGGV+YF F FIP+FLAYSATLIDP MV+ L++TD QL+LPTLIM Sbjct: 241 GASKNEKIAGRASILGGVMYFCFAFIPMFLAYSATLIDPQMVAGLIDTDPQLILPTLIMN 300 Query: 326 KMPVFAQVMFFGALLSAIKSCASATLLAPSVTFTENVLREIRPWKSDREFLFSMRAVVLV 385 K+P+ AQVMFFGALLSAIKSCASATLLAPS+TFTEN+L+ + P ++D++FL MR V++V Sbjct: 301 KVPLIAQVMFFGALLSAIKSCASATLLAPSITFTENILKGLLPVQTDKQFLLGMRCVLVV 360 Query: 386 FTVGVTT---------------------------LAFGVYWQRATRQGALMAMVLGLVSW 418 FTV VT LA G+YW+RATRQGAL +++LGL SW Sbjct: 361 FTVIVTAFALHSQSSIYKMVENAYKITLVAAFVPLALGLYWKRATRQGALASIILGLSSW 420 Query: 419 ITLEYAAPDGLWPPQLAGLLFSIGGMVVGSLMPQVL 454 I E AP+G WPPQL G++ S+ GM++GSL+PQV+ Sbjct: 421 ILFELFAPEGYWPPQLVGIVLSLAGMLLGSLVPQVV 456 >ref|ZP_04577800.1| Na+/solute symporter [Oxalobacter formigenes HOxBLS] gb|EEO28762.1| Na+/solute symporter [Oxalobacter formigenes HOxBLS] Length = 472 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 307/464 (66%), Positives = 373/464 (80%), Gaps = 27/464 (5%) Query: 14 MNALLWFVVLYWVISVGIGLYATRYVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLG 73 MN L+WFVVLYW+ISVGIG+YA RYV++SKD+A+AGRSLPMSVVTATVFATWFGSEAVLG Sbjct: 1 MNTLVWFVVLYWIISVGIGMYAARYVRNSKDFAIAGRSLPMSVVTATVFATWFGSEAVLG 60 Query: 74 VSSTFLKDGLGGIVADPFGSSLCLILVGVFFAKKLYRMNLLTIGDYYKKRFGRAAEMLVT 133 + +TF+K+G G++ADPFGS++CL+LVG+ FAK+LYRMNL+TI DYY+ R+GRA E++V+ Sbjct: 61 IPATFVKEGFTGVIADPFGSAMCLVLVGLLFAKRLYRMNLMTISDYYRNRYGRAVEIIVS 120 Query: 134 ICIVISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDF 193 +CIV+SYLGWVAAQIKALGLVFNV+SGG I M+ GMIIG+ SVL+YTLMGGMW+VAITDF Sbjct: 121 LCIVVSYLGWVAAQIKALGLVFNVISGGVISMNMGMIIGSVSVLVYTLMGGMWSVAITDF 180 Query: 194 LQMIIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMML 253 LQMII+V+G++YIG+EVSGMVGG VVI HAAEAGK +P EL+D+LWFF AW+T+M Sbjct: 181 LQMIIIVIGIVYIGWEVSGMVGGADVVIRHAAEAGKLRIYPKPELRDILWFFGAWVTLMF 240 Query: 254 GSIPQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPAMVSRLLET 313 GSIPQQDVFQRV SSK+ENVARNAS++GG+ Y F IP+FL YSA LIDPA+V R + Sbjct: 241 GSIPQQDVFQRVASSKDENVARNASIVGGIFYLLFALIPMFLCYSAILIDPALVERFING 300 Query: 314 DSQLVLPTLIMEKMPVFAQVMFFGALLSAIKSCASATLLAPSVTFTENVLREIRPWKSDR 373 DSQ++LP +IM MPVFAQVMFFGALLSAIKSCASATLLAPSVTF+ENV++EI P SDR Sbjct: 301 DSQMILPVMIMTYMPVFAQVMFFGALLSAIKSCASATLLAPSVTFSENVMKEILPNLSDR 360 Query: 374 EFLFSMRAVVLVFTVGVTTLAF---------------------------GVYWQRATRQG 406 + LF MR VVLVF VT A G +W+ A +G Sbjct: 361 QSLFMMRIVVLVFAGIVTIFAMNTDSSIFEMVEDAYKVTLVAAFVPLICGFFWKYANNRG 420 Query: 407 ALMAMVLGLVSWITLEYAAPDGLWPPQLAGLLFSIGGMVVGSLM 450 AL +M++GL SWI LE PDG++PPQL GL+ S+ GMV GSL+ Sbjct: 421 ALTSMIMGLASWIFLEIVYPDGVFPPQLMGLVMSLIGMVAGSLL 464 >ref|YP_002980331.1| Na+/solute symporter [Ralstonia pickettii 12D] gb|ACS61659.1| Na+/solute symporter [Ralstonia pickettii 12D] Length = 479 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 304/470 (64%), Positives = 365/470 (77%), Gaps = 27/470 (5%) Query: 17 LLWFVVLYWVISVGIGLYATRYVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLGVSS 76 L+WFV++YWVISVGIGL+A V+++ D+AVAGRSLP VVTATVFATWFGSEAVLG+ + Sbjct: 2 LIWFVIVYWVISVGIGLWAALRVRNTADFAVAGRSLPFYVVTATVFATWFGSEAVLGIPA 61 Query: 77 TFLKDGLGGIVADPFGSSLCLILVGVFFAKKLYRMNLLTIGDYYKKRFGRAAEMLVTICI 136 FLKDGL G+VADPFGSSLCL+LVG+FFAK LYRMNLLTIGD+Y+ RFGR AE L T+CI Sbjct: 62 EFLKDGLHGVVADPFGSSLCLVLVGLFFAKPLYRMNLLTIGDFYRNRFGRVAETLTTLCI 121 Query: 137 VISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDFLQM 196 V+SYLGWVAAQIKALGLVF VS G + GM+IGAGSVL+YTL GGMW+VA+TDF+QM Sbjct: 122 VVSYLGWVAAQIKALGLVFYTVSDGAVSQDLGMMIGAGSVLVYTLFGGMWSVAVTDFIQM 181 Query: 197 IIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMMLGSI 256 II+V+GMLYIG+EVSG GG G V+AHAA +GKF+FWPA +++ F AWITMMLGSI Sbjct: 182 IIIVIGMLYIGWEVSGQAGGVGTVVAHAAASGKFSFWPAFNPIEIIGFVTAWITMMLGSI 241 Query: 257 PQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPAMVSRLLETDSQ 316 PQQDVFQRV SS+ E +A ASVLGGV+YF F F+P+FLAYSATLIDP MV++ ++TDSQ Sbjct: 242 PQQDVFQRVTSSRTERIAGTASVLGGVLYFMFAFVPMFLAYSATLIDPQMVAKYIDTDSQ 301 Query: 317 LVLPTLIMEKMPVFAQVMFFGALLSAIKSCASATLLAPSVTFTENVLREIRPWKSDREFL 376 ++LP L+++ P+FAQVMFFGALLSAIKSCASATLLAPSVTF ENVLR + P D+ FL Sbjct: 302 MILPNLVLQHAPIFAQVMFFGALLSAIKSCASATLLAPSVTFAENVLRPLLPNMDDKRFL 361 Query: 377 FSMRAVVLVFTVGVT---------------------------TLAFGVYWQRATRQGALM 409 M+AVVL FTV VT LAFG++W+RAT+QG L+ Sbjct: 362 RVMQAVVLTFTVLVTLFALNSHLSIFHMVESAYKVTLVAAFVPLAFGLFWKRATKQGGLL 421 Query: 410 AMVLGLVSWITLEYAAPDGLWPPQLAGLLFSIGGMVVGSLMPQVLAPVPP 459 A++LGL +WI E P+ + PPQL GLL S G MV GSL PQ +A P Sbjct: 422 AIILGLAAWIWCEVFLPNAMLPPQLVGLLASFGAMVAGSLGPQWIANRAP 471 >ref|ZP_04579950.1| Na+/solute symporter [Oxalobacter formigenes OXCC13] gb|EEO30923.1| Na+/solute symporter [Oxalobacter formigenes OXCC13] Length = 479 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 304/464 (65%), Positives = 367/464 (79%), Gaps = 27/464 (5%) Query: 14 MNALLWFVVLYWVISVGIGLYATRYVKSSKDYAVAGRSLPMSVVTATVFATWFGSEAVLG 73 MN L+WFVVLYW++SVGIG+YA RYV++SKD+AVAGRSLPM+VVTA VFATWFGSEAVLG Sbjct: 1 MNTLIWFVVLYWIVSVGIGIYAARYVRNSKDFAVAGRSLPMAVVTAMVFATWFGSEAVLG 60 Query: 74 VSSTFLKDGLGGIVADPFGSSLCLILVGVFFAKKLYRMNLLTIGDYYKKRFGRAAEMLVT 133 + +TF++ G G++ADPFGS++CLI+VG+ FAK+LYRMNL+TI DYYK R+GRA E++V+ Sbjct: 61 IPATFVQKGFVGVIADPFGSAMCLIIVGLVFAKRLYRMNLMTISDYYKNRYGRAVEIIVS 120 Query: 134 ICIVISYLGWVAAQIKALGLVFNVVSGGYIPMHWGMIIGAGSVLIYTLMGGMWAVAITDF 193 +CIVISYLGWVAAQIKALGLVFNVVSGG I M+ GMIIG+ SVL+YTLMGGMW+VAITDF Sbjct: 121 LCIVISYLGWVAAQIKALGLVFNVVSGGAISMNTGMIIGSVSVLVYTLMGGMWSVAITDF 180 Query: 194 LQMIIVVVGMLYIGYEVSGMVGGPGVVIAHAAEAGKFNFWPAAELKDVLWFFAAWITMML 253 LQMII+V+G++YI +EVSGMVGG +V+ HAAEAGK WP EL+D+LWFF AW+T+M Sbjct: 181 LQMIIIVIGIIYISWEVSGMVGGAEMVVRHAAEAGKLRIWPKPELRDILWFFGAWVTLMF 240 Query: 254 GSIPQQDVFQRVMSSKNENVARNASVLGGVIYFFFVFIPIFLAYSATLIDPAMVSRLLET 313 GSIPQQDVFQRV SSKNENVARNAS++GGV Y F IP+FL YSA LIDP +V L++ Sbjct: 241 GSIPQQDVFQRVASSKNENVARNASIVGGVFYLLFALIPMFLCYSAMLIDPVLVESLIDK 300 Query: 314 DSQLVLPTLIMEKMPVFAQVMFFGALLSAIKSCASATLLAPSVTFTENVLREIRPWKSDR 373 DSQ++LP +IM MPVFAQVMFFGALLSAIKSCASATLLAPSVTF+ENV++EI P SD+ Sbjct: 301 DSQMILPMMIMTYMPVFAQVMFFGALLSAIKSCASATLLAPSVTFSENVMKEILPNLSDK 360 Query: 374 EFLFSMRAVVLVFTVGVTTLAF---------------------------GVYWQRATRQG 406 + L MR VVLVF V VT A G +W+ A R G Sbjct: 361 QSLLMMRLVVLVFAVIVTVFAMNSNSSIFEMVEDAYKITLVAAFVPLVAGFFWKYANRHG 420 Query: 407 ALMAMVLGLVSWITLEYAAPDGLWPPQLAGLLFSIGGMVVGSLM 450 AL +M+ GLVSWI +E PD PPQL GL+ S+ GM+ GSL+ Sbjct: 421 ALTSMIAGLVSWIGMEILCPDWTMPPQLVGLVMSVIGMIAGSLV 464